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CmaCh14G013210 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G013210
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionBeta-galactosidase
Genome locationCma_Chr14:10369330..10369641
RNA-Seq ExpressionCmaCh14G013210
SyntenyCmaCh14G013210
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35
IPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023637.1 Beta-galactosidase 7, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2262.89Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT YGD                   VPWIMCQQSDA  P+INTCN FYC NFTPNN KSP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

XP_008447673.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]8.2e-2261.86Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT YG                   D+PWIMCQQSDA  PIINTCN FYC NFTPNN  SP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

XP_022960835.1 beta-galactosidase 7-like [Cucurbita moschata]2.8e-2262.89Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT YGD                   VPWIMCQQSDA  P+INTCN FYC NFTPNN KSP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

XP_023516817.1 beta-galactosidase 7-like [Cucurbita pepo subsp. pepo]2.8e-2262.89Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT YGD                   VPWIMCQQSDA  P+INTCN FYC NFTPNN KSP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

XP_023521639.1 beta-galactosidase-like, partial [Cucurbita pepo subsp. pepo]2.8e-2262.89Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT YGD                   VPWIMCQQSDA  P+INTCN FYC NFTPNN KSP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

TrEMBL top hitse value%identityAlignment
A0A1S3BIK7 Beta-galactosidase4.0e-2261.86Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT YG                   D+PWIMCQQSDA  PIINTCN FYC NFTPNN  SP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

A0A5A7TYV0 Beta-galactosidase6.8e-2262.24Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMT-LYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT  YGD                   VPWIMCQ+SDA  PIINTCN+FYC NFTPNN KSP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMT-LYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

A0A5D3DA46 Beta-galactosidase4.0e-2261.86Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT YG                   D+PWIMCQQSDA  PIINTCN FYC NFTPNN  SP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

A0A6J1HA84 Beta-galactosidase1.4e-2262.89Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM KQA  FA + GPII AQIENEY NVMT YGD                   VPWIMCQQSDA  P+INTCN FYC NFTPNN KSP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

A0A6J1JAY7 Beta-galactosidase6.8e-2261.86Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM K A  FA + GPII AQIENEY NVMT YGD                   VPWIMCQQSDA  P+INTCN FYC NFTPNN KSP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

SwissProt top hitse value%identityAlignment
P49676 Beta-galactosidase1.7e-1749.48Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIVNM K+   FA + GPII AQIENEY NV++ YG                    VPWIMCQQ  A  P+I TCN FYC  + P+N  SP
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

Q10NX8 Beta-galactosidase 66.3e-1746.39Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F  K+V+  K A  +A + GPII +QIENEY N+ + YG                    VPW+MCQQSDA  P+INTCN FYC  FTPN+   P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

Q9C6W4 Beta-galactosidase 152.0e-1849.48Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F T IV M K+   FA + GPII AQIENEY NV+  YG+                   VPWIMCQQ DA  P++NTCN +YC NF+PNN  +P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

Q9SCV4 Beta-galactosidase 82.8e-1747.42Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIV++ KQ   +A + GPII +QIENEY N+ + YG                    VPW MCQQ+DA  P+INTCN FYC  FTPN+   P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

Q9SCV5 Beta-galactosidase 75.3e-1645.36Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIV M K+   FA + GPII AQIENEY NV++ YG                    VPW+MCQQ +A  P++ TCN FYC  + P N  +P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

Arabidopsis top hitse value%identityAlignment
AT1G31740.1 beta-galactosidase 151.4e-1949.48Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F T IV M K+   FA + GPII AQIENEY NV+  YG+                   VPWIMCQQ DA  P++NTCN +YC NF+PNN  +P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

AT2G28470.1 beta-galactosidase 82.0e-1847.42Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIV++ KQ   +A + GPII +QIENEY N+ + YG                    VPW MCQQ+DA  P+INTCN FYC  FTPN+   P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

AT2G28470.2 beta-galactosidase 82.0e-1847.42Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIV++ KQ   +A + GPII +QIENEY N+ + YG                    VPW MCQQ+DA  P+INTCN FYC  FTPN+   P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

AT5G20710.1 beta-galactosidase 73.8e-1745.36Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        MQ F TKIV M K+   FA + GPII AQIENEY NV++ YG                    VPW+MCQQ +A  P++ TCN FYC  + P N  +P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYG-------------------DVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP

AT5G63810.1 beta-galactosidase 109.3e-1644.33Show/hide
Query:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP
        M+ F T IVN+ KQ   FA + GPII +Q+ENEY      YG+                   VPW+MCQQ DA P +I+TCN FYC  FTPN    P
Subjt:  MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGD-------------------VPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTTTTCAAAACAAAAATAGTGAATATGGGTAAACAAGCCATCCACTTTGCATTGGAAGAAGGGCCAATAATCTTTGCTCAAATAGAGAACGAGTATGTA
AATGTGATGACACTTTATGGAGACGTTCCATGGATCATGTGCCAACAAAGTGATGCCCGACCGCCTATCATTAATACATGCAATAAATTCTATTGCCATAACTTT
ACTCCTAACAATTTTAAGAGCCCACCTGATATCCAACAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTTTTCAAAACAAAAATAGTGAATATGGGTAAACAAGCCATCCACTTTGCATTGGAAGAAGGGCCAATAATCTTTGCTCAAATAGAGAACGAGTATGTA
AATGTGATGACACTTTATGGAGACGTTCCATGGATCATGTGCCAACAAAGTGATGCCCGACCGCCTATCATTAATACATGCAATAAATTCTATTGCCATAACTTT
ACTCCTAACAATTTTAAGAGCCCACCTGATATCCAACAACCATAA
Protein sequenceShow/hide protein sequence
MQFFKTKIVNMGKQAIHFALEEGPIIFAQIENEYVNVMTLYGDVPWIMCQQSDARPPIINTCNKFYCHNFTPNNFKSPPDIQQP