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CmaCh14G013260 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G013260
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionBeta-galactosidase
Genome locationCma_Chr14:10395002..10395542
RNA-Seq ExpressionCmaCh14G013260
SyntenyCmaCh14G013260
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055125.1 beta-galactosidase 7-like [Cucumis melo var. makuwa]4.2e-2356.56Show/hide
Query:  PTQTEPLV-NSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQ
        P   +P+V + Q   K Q    WVNGQSI RF PSFIA N SCS TCD      PSKCVGNCGNPSQRWYHVPRS                 N QQ+SVQ
Subjt:  PTQTEPLV-NSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQ

Query:  TITVGYVHGNANEGSTLKLNVQ
        TIT+G + GNANEGSTL+L+ Q
Subjt:  TITVGYVHGNANEGSTLKLNVQ

KAE8653552.1 hypothetical protein Csa_007631 [Cucumis sativus]1.2e-2260Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRSNL-----------------QQLSVQTITVGYVHGNANEGSTLKLNVQ
        W+NGQSI RF PSFIA N +CS TC      DPSKCVGNCGNPSQRWYH+PRS L                 QQ+SVQTIT+G + GNANEGSTL+L+ Q
Subjt:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRSNL-----------------QQLSVQTITVGYVHGNANEGSTLKLNVQ

XP_004135782.3 beta-galactosidase 15 [Cucumis sativus]4.2e-2362Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ
        WVNGQSI RF PSFIASN SCS TCD      PSKCV NCGNPSQRWYH+PRS                 N QQ+SVQTIT+G + GNANEGSTL+L+ Q
Subjt:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ

XP_004139151.2 beta-galactosidase 7 [Cucumis sativus]1.2e-2260Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRSNL-----------------QQLSVQTITVGYVHGNANEGSTLKLNVQ
        W+NGQSI RF PSFIA N +CS TC      DPSKCVGNCGNPSQRWYH+PRS L                 QQ+SVQTIT+G + GNANEGSTL+L+ Q
Subjt:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRSNL-----------------QQLSVQTITVGYVHGNANEGSTLKLNVQ

XP_008437707.1 PREDICTED: beta-galactosidase 7-like, partial [Cucumis melo]2.1e-2261Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ
        WVNGQSI RF PSFIA N SC+ TC      DPSKCV NCGNPSQRWYHVPRS                 N QQ+SVQTIT+G + GNANEGSTL+L+ Q
Subjt:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KRM6 Beta-galactosidase4.5e-2362Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ
        WVNGQSI RF PSFIA N SCS TCD      PSKCV NCGNPSQRWYHVPRS                 N QQ+SVQTIT+G + GNANEGSTL+L+ Q
Subjt:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ

A0A0A0LXX7 Beta-galactosidase5.9e-2360Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRSNL-----------------QQLSVQTITVGYVHGNANEGSTLKLNVQ
        W+NGQSI RF PSFIA N +CS TC      DPSKCVGNCGNPSQRWYH+PRS L                 QQ+SVQTIT+G + GNANEGSTL+L+ Q
Subjt:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRSNL-----------------QQLSVQTITVGYVHGNANEGSTLKLNVQ

A0A1S3AUN1 Beta-galactosidase1.0e-2261Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ
        WVNGQSI RF PSFIA N SC+ TC      DPSKCV NCGNPSQRWYHVPRS                 N QQ+SVQTIT+G + GNANEGSTL+L+ Q
Subjt:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ

A0A5A7UJD2 Beta-galactosidase1.3e-2260Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ
        WVNGQSI RF PSF+A N SC+ TC      DPSKCV NCGNPSQRWYHVPRS                 N QQ+SVQTIT+G + GNANEGSTL+L+ Q
Subjt:  WVNGQSICRFTPSFIASNGSCSVTC------DPSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQTITVGYVHGNANEGSTLKLNVQ

A0A5A7UNA7 Beta-galactosidase2.0e-2356.56Show/hide
Query:  PTQTEPLV-NSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQ
        P   +P+V + Q   K Q    WVNGQSI RF PSFIA N SCS TCD      PSKCVGNCGNPSQRWYHVPRS                 N QQ+SVQ
Subjt:  PTQTEPLV-NSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRS-----------------NLQQLSVQ

Query:  TITVGYVHGNANEGSTLKLNVQ
        TIT+G + GNANEGSTL+L+ Q
Subjt:  TITVGYVHGNANEGSTLKLNVQ

SwissProt top hitse value%identityAlignment
P45582 Beta-galactosidase4.7e-0950Show/hide
Query:  APTQTEPL-VNSQTSSKEQNEKEWVNGQSICRFTPSFIASN--GSCSV--TCDPSKCVGNCGNPSQRWYHVPRS
        AP   EPL ++  T  K Q    W+NGQSI R+ P++ AS   GSC    T +  KC+ NCG  SQRWYHVPRS
Subjt:  APTQTEPL-VNSQTSSKEQNEKEWVNGQSICRFTPSFIASN--GSCSV--TCDPSKCVGNCGNPSQRWYHVPRS

P48981 Beta-galactosidase1.0e-0856.86Show/hide
Query:  WVNGQSICRFTPSFIA--SNGSCSV--TCDPSKCVGNCGNPSQRWYHVPRS
        W+NGQS+ R  P +IA  S G CS   T D  KC  +CG PSQRWYH+PRS
Subjt:  WVNGQSICRFTPSFIA--SNGSCSV--TCDPSKCVGNCGNPSQRWYHVPRS

P49676 Beta-galactosidase1.1e-1049.23Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITV
        W+NGQSI R+ PSF +S+  C+  CD        KC   CG P+QRWYHVPRS L      TIT+
Subjt:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITV

Q9SCV4 Beta-galactosidase 85.5e-1046.15Show/hide
Query:  APTQTEPLVNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQ
        AP+ +EP+    T + +     WVNGQSI R+ P+ IA NG C+ +CD       +KC+ NCG PSQ  YHVPRS L+
Subjt:  APTQTEPLVNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQ

Q9SCV5 Beta-galactosidase 71.9e-1049.23Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITV
        W+NGQSI R+ PSF +S+  C   CD        KC   CG P+QRWYHVPRS L      TIT+
Subjt:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITV

Arabidopsis top hitse value%identityAlignment
AT1G45130.1 beta-galactosidase 58.2e-0937.25Show/hide
Query:  APTQTEPL-VNSQTSSKEQNEKEWVNGQSICRFTPSFIASN-GSCSV--TCDPSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITVGYVHGNANEGSTLKL
        AP   EPL ++ ++  K Q    W+NGQSI R+  +F   + GSC+   T   +KC   CG P+QRWYHVPRS L+      +    + G+ ++ S +K 
Subjt:  APTQTEPL-VNSQTSSKEQNEKEWVNGQSICRFTPSFIASN-GSCSV--TCDPSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITVGYVHGNANEGSTLKL

Query:  NV
        +V
Subjt:  NV

AT2G28470.1 beta-galactosidase 83.9e-1146.15Show/hide
Query:  APTQTEPLVNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQ
        AP+ +EP+    T + +     WVNGQSI R+ P+ IA NG C+ +CD       +KC+ NCG PSQ  YHVPRS L+
Subjt:  APTQTEPLVNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQ

AT2G28470.2 beta-galactosidase 83.9e-1146.15Show/hide
Query:  APTQTEPLVNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQ
        AP+ +EP+    T + +     WVNGQSI R+ P+ IA NG C+ +CD       +KC+ NCG PSQ  YHVPRS L+
Subjt:  APTQTEPLVNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQ

AT4G26140.1 beta-galactosidase 122.8e-0939.6Show/hide
Query:  APTQTEPL-VNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSC-----SVTCDPSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITVGYVHGNANEGSTL
        +PT  EPL ++  T  K Q    W+NGQ+I R  P++ A  G C     + T    KC+ NCG  SQRWYHVPRS L+  +   I +    G  N  S +
Subjt:  APTQTEPL-VNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSC-----SVTCDPSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITVGYVHGNANEGSTL

Query:  K
        K
Subjt:  K

AT5G20710.1 beta-galactosidase 71.3e-1149.23Show/hide
Query:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITV
        W+NGQSI R+ PSF +S+  C   CD        KC   CG P+QRWYHVPRS L      TIT+
Subjt:  WVNGQSICRFTPSFIASNGSCSVTCD------PSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCCACTCAGACCGAACCTTTGGTTAATTCTCAGACATCATCGAAGGAACAAAATGAGAAGGAATGGGTAAATGGGCAAAGCATATGCCGATTTACGCCTTCTTT
CATTGCTAGCAACGGTAGTTGCAGTGTTACTTGTGACCCTAGCAAATGTGTTGGAAATTGTGGGAATCCTTCTCAAAGATGGTATCACGTCCCACGATCAAATCTTCAAC
AACTTTCAGTTCAAACTATTACTGTAGGATATGTACATGGAAATGCTAATGAAGGAAGCACTTTAAAACTCAATGTCCAATCAAGCCTATTTGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCCACTCAGACCGAACCTTTGGTTAATTCTCAGACATCATCGAAGGAACAAAATGAGAAGGAATGGGTAAATGGGCAAAGCATATGCCGATTTACGCCTTCTTT
CATTGCTAGCAACGGTAGTTGCAGTGTTACTTGTGACCCTAGCAAATGTGTTGGAAATTGTGGGAATCCTTCTCAAAGATGGTATCACGTCCCACGATCAAATCTTCAAC
AACTTTCAGTTCAAACTATTACTGTAGGATATGTACATGGAAATGCTAATGAAGGAAGCACTTTAAAACTCAATGTCCAATCAAGCCTATTTGAAAATTGA
Protein sequenceShow/hide protein sequence
MAPTQTEPLVNSQTSSKEQNEKEWVNGQSICRFTPSFIASNGSCSVTCDPSKCVGNCGNPSQRWYHVPRSNLQQLSVQTITVGYVHGNANEGSTLKLNVQSSLFEN