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CmaCh14G014360 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G014360
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionTransmembrane protein
Genome locationCma_Chr14:11005451..11005837
RNA-Seq ExpressionCmaCh14G014360
SyntenyCmaCh14G014360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582012.1 hypothetical protein SDJN03_22014, partial [Cucurbita argyrosperma subsp. sororia]9.5e-5496.77Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSP +AIPSSDQ SMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPSRQDIP
        VSCLSMIGRSIFCYATAP RQDIP
Subjt:  VSCLSMIGRSIFCYATAPSRQDIP

KAG7018435.1 hypothetical protein SDJN02_20303, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-5696.88Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSP +AIPSSDQ SMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPSRQDIPGTVV
        VSCLSMIGRSIFCYATAP RQDIPGTVV
Subjt:  VSCLSMIGRSIFCYATAPSRQDIPGTVV

XP_022955758.1 uncharacterized protein LOC111457656 [Cucurbita moschata]7.2e-5497.56Show/hide
Query:  MRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV
        MRRQQQDEQSSVFYELSSLVMNILRSP +AIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV
Subjt:  MRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV

Query:  SCLSMIGRSIFCYATAPSRQDIP
        SCLSMIGRSIFCYATAP RQDIP
Subjt:  SCLSMIGRSIFCYATAPSRQDIP

XP_022979452.1 uncharacterized protein LOC111479165 [Cucurbita maxima]3.5e-56100Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPSRQDIP
        VSCLSMIGRSIFCYATAPSRQDIP
Subjt:  VSCLSMIGRSIFCYATAPSRQDIP

XP_023526129.1 uncharacterized protein LOC111789701 [Cucurbita pepo subsp. pepo]1.6e-5396.77Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSPPSAI SSDQSSMVSAVSSRRPIPMQITPAGFA LLLGISLALMLCGS+TFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPSRQDIP
        VSCLSMIGRSIFCYATAP RQDIP
Subjt:  VSCLSMIGRSIFCYATAPSRQDIP

TrEMBL top hitse value%identityAlignment
A0A1S3BX78 uncharacterized protein LOC103494590 isoform X21.5e-4485.71Show/hide
Query:  MMRRQQQD-EQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM+RQQ+D  +SSVFYELSSLVMNILR+PPS+IP SD S +VS A SSRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMRRQQQD-EQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSCLSMIGRSIFCYATAPSRQDIP
        AVVSCLSMIGRSI CYATAP R+DIP
Subjt:  AVVSCLSMIGRSIFCYATAPSRQDIP

A0A1S3BYH6 uncharacterized protein LOC103494590 isoform X13.0e-4585.83Show/hide
Query:  MMRRQQQD-EQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM+RQQ+D  +SSVFYELSSLVMNILR+PPS+IP SD S +VS A SSRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMRRQQQD-EQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSCLSMIGRSIFCYATAPSRQDIPG
        AVVSCLSMIGRSI CYATAP R+DIPG
Subjt:  AVVSCLSMIGRSIFCYATAPSRQDIPG

A0A5A7TRR9 Uncharacterized protein3.0e-4585.83Show/hide
Query:  MMRRQQQD-EQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
        MM+RQQ+D  +SSVFYELSSLVMNILR+PPS+IP SD S +VS A SSRR IP QITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA
Subjt:  MMRRQQQD-EQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVS-AVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVA

Query:  AVVSCLSMIGRSIFCYATAPSRQDIPG
        AVVSCLSMIGRSI CYATAP R+DIPG
Subjt:  AVVSCLSMIGRSIFCYATAPSRQDIPG

A0A6J1GUW1 uncharacterized protein LOC1114576563.5e-5497.56Show/hide
Query:  MRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV
        MRRQQQDEQSSVFYELSSLVMNILRSP +AIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV
Subjt:  MRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVV

Query:  SCLSMIGRSIFCYATAPSRQDIP
        SCLSMIGRSIFCYATAP RQDIP
Subjt:  SCLSMIGRSIFCYATAPSRQDIP

A0A6J1INR6 uncharacterized protein LOC1114791651.7e-56100Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
        MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAV

Query:  VSCLSMIGRSIFCYATAPSRQDIP
        VSCLSMIGRSIFCYATAPSRQDIP
Subjt:  VSCLSMIGRSIFCYATAPSRQDIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein1.0e-2957.03Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSA----------VSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIG
        MMRRQ+ ++QS VFY+LSSLV+N+LRSPP  I   D      A           SS  P    I+P+GFASLLLGIS+ALMLCGSVTFFIGF++MPWV+ 
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSA----------VSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIG

Query:  LVMFFYVAAVVSCLSMIGRSIFCYATAP
        L++ FYVA +VS +SM+GRSI CY   P
Subjt:  LVMFFYVAAVVSCLSMIGRSIFCYATAP

AT1G27290.2 unknown protein1.0e-2957.03Show/hide
Query:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSA----------VSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIG
        MMRRQ+ ++QS VFY+LSSLV+N+LRSPP  I   D      A           SS  P    I+P+GFASLLLGIS+ALMLCGSVTFFIGF++MPWV+ 
Subjt:  MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSA----------VSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIG

Query:  LVMFFYVAAVVSCLSMIGRSIFCYATAP
        L++ FYVA +VS +SM+GRSI CY   P
Subjt:  LVMFFYVAAVVSCLSMIGRSIFCYATAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGACGGCAGCAGCAAGATGAGCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGTTATGAATATCCTCCGATCGCCCCCGTCGGCGATCCCGTCTTCC
GATCAGTCGTCGATGGTTTCAGCCGTGTCGTCGCGGCGGCCGATTCCGATGCAGATAACTCCGGCGGGGTTTGCGTCGCTACTTCTAGGGATTTCTTTGGCTCTG
ATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTTATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTATGTCGCTGCTGTGGTTTCGTGCCTGTCC
ATGATCGGACGCTCGATTTTCTGCTACGCTACGGCTCCGTCTAGACAGGATATTCCAGGTACGGTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCGACGGCAGCAGCAAGATGAGCAATCGAGTGTTTTCTACGAGCTTTCTTCTCTTGTTATGAATATCCTCCGATCGCCCCCGTCGGCGATCCCGTCTTCC
GATCAGTCGTCGATGGTTTCAGCCGTGTCGTCGCGGCGGCCGATTCCGATGCAGATAACTCCGGCGGGGTTTGCGTCGCTACTTCTAGGGATTTCTTTGGCTCTG
ATGCTCTGTGGATCGGTTACGTTCTTCATCGGCTTTATGATGATGCCTTGGGTTATTGGATTGGTTATGTTTTTCTATGTCGCTGCTGTGGTTTCGTGCCTGTCC
ATGATCGGACGCTCGATTTTCTGCTACGCTACGGCTCCGTCTAGACAGGATATTCCAGGTACGGTGGTTTGA
Protein sequenceShow/hide protein sequence
MMRRQQQDEQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVSAVSSRRPIPMQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLS
MIGRSIFCYATAPSRQDIPGTVV