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CmaCh14G014580 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G014580
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNuclear transport factor 2B
Genome locationCma_Chr14:11104795..11105662
RNA-Seq ExpressionCmaCh14G014580
SyntenyCmaCh14G014580
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582033.1 hypothetical protein SDJN03_22035, partial [Cucurbita argyrosperma subsp. sororia]9.3e-7895.78Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL
        MAEAAAEEMELISLAIRRLMEE NNRT SHRSSG +DLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKN+TEKEIVKEIKEV+RQNFITHCLVSAMVVL
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL

Query:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ
        TVAWQVSEVSFILKLRDGLSNPFK+LARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ
Subjt:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ

XP_022956151.1 uncharacterized protein LOC111457933 [Cucurbita moschata]7.4e-6795.3Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL
        MAEAAAEEMELISLAIRRLMEE NNRT SHRSSGG+DLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKN+TEKEIVKEIKEV+RQNFITHCLVSAMVVL
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL

Query:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPA
         VAWQVSEVSFILKLRDGLSNPFK+LARILKRNTTSAIQHKIEATELPA
Subjt:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPA

XP_022979951.1 uncharacterized protein LOC111479485 [Cucurbita maxima]8.2e-82100Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL
        MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL

Query:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ
        TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ
Subjt:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ

XP_023526027.1 uncharacterized protein LOC111789626 [Cucurbita pepo subsp. pepo]3.5e-7795.18Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL
        MAEAAAEEMELISLAIRRLMEE  NRT SHRS GG+DLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKN+TEKEIVKEIKEVKRQNFITHCLVSA VVL
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL

Query:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ
        TVAWQVSEVSFILKLRDGLSNPFK+LARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ
Subjt:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ

XP_038895500.1 uncharacterized protein LOC120083719 [Benincasa hispida]1.1e-5169.31Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSG--GNDLQFLSRLLSQVESTREQGRRKHS-----QQDDKIIQKNL----------------TEKEIV
        MAE A EEMELISLAIRRLMEE +NRT SHRSSG   +DLQ LSRLLSQVESTRE+ R  HS     Q+D+KII+  L                 EK IV
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSG--GNDLQFLSRLLSQVESTREQGRRKHS-----QQDDKIIQKNL----------------TEKEIV

Query:  KEIKEVKRQNFITHCLVSAMVVLTVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATEL-----PALPHVNLPDFHLN
        KE+KEVKRQNFITHCLVSAM++LTVAWQVSEVSFILKLR+GLSNPFKSL  ILKR TTSAIQH+IEATEL     PALPHVNLP+F L+
Subjt:  KEIKEVKRQNFITHCLVSAMVVLTVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATEL-----PALPHVNLPDFHLN

TrEMBL top hitse value%identityAlignment
A0A0A0KTW6 Uncharacterized protein3.4e-4967.2Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSS------GGNDLQFLSRLLSQVESTREQGRRKHSQQDD-KIIQKN---------------LTEKEIVK
        MAEAAA EMELISLAIRRLMEE  +RT SHRSS        +D+Q LSRLLS+VESTR + R  HS+Q+D +II+ N               L  +EIVK
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSS------GGNDLQFLSRLLSQVESTREQGRRKHSQQDD-KIIQKN---------------LTEKEIVK

Query:  EIKEVKRQNFITHCLVSAMVVLTVAWQVSEVSFILKLRDG-LSNPFKSLARILKRNTTSAIQHKIEATEL-----PALPHVNLPDF
        E+KEVK+QNFITHCLVSAM++LTVAWQ+SEVSFILKLRDG LSNPFKSLA ILKR TTSAIQH+IEATEL     PALPHV LPDF
Subjt:  EIKEVKRQNFITHCLVSAMVVLTVAWQVSEVSFILKLRDG-LSNPFKSLARILKRNTTSAIQHKIEATEL-----PALPHVNLPDF

A0A1S3BXR6 uncharacterized protein LOC1034945628.3e-4864.86Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSS----GGNDLQFLSRLLSQVESTREQGRRKH--SQQDDKIIQKNL---------------TEKEIVKE
        M +AA EEMELISLAIRRLMEE  NRT SHRSS      +D+Q LS+LLS+VESTRE+ R  H   Q+D +II+ NL                 +EIVKE
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSS----GGNDLQFLSRLLSQVESTREQGRRKH--SQQDDKIIQKNL---------------TEKEIVKE

Query:  IKEVKRQNFITHCLVSAMVVLTVAWQVSEVSFILKLRDG-LSNPFKSLARILKRNTTSAIQHKIEATEL-----PALPHVNLPDF
        +KEVK+QNF+THCLVSAM++LTVAWQ+SEVSFILKLRDG LSNPFKSL  ILKR TTSAIQH+IEATEL     PA+PHV+LPDF
Subjt:  IKEVKRQNFITHCLVSAMVVLTVAWQVSEVSFILKLRDG-LSNPFKSLARILKRNTTSAIQHKIEATEL-----PALPHVNLPDF

A0A5A7TSP6 Uncharacterized protein1.0e-4564.97Show/hide
Query:  MELISLAIRRLMEEKNNRTGSHRSS----GGNDLQFLSRLLSQVESTREQGRRKH--SQQDDKIIQKNL---------------TEKEIVKEIKEVKRQN
        MELISLAIRRLMEE  NRT SHRSS      +D+Q LS+LLS+VESTRE+ R  H   Q+D +II+ NL                 +EIVKE+KEVK+QN
Subjt:  MELISLAIRRLMEEKNNRTGSHRSS----GGNDLQFLSRLLSQVESTREQGRRKH--SQQDDKIIQKNL---------------TEKEIVKEIKEVKRQN

Query:  FITHCLVSAMVVLTVAWQVSEVSFILKLRDG-LSNPFKSLARILKRNTTSAIQHKIEATEL-----PALPHVNLPDF
        F+THCLVSAM++LTVAWQ+SEVSFILKLRDG LSNPFKSL  ILKR TTSAIQH+IEATEL     PA+PHV+LPDF
Subjt:  FITHCLVSAMVVLTVAWQVSEVSFILKLRDG-LSNPFKSLARILKRNTTSAIQHKIEATEL-----PALPHVNLPDF

A0A6J1GVS4 uncharacterized protein LOC1114579333.6e-6795.3Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL
        MAEAAAEEMELISLAIRRLMEE NNRT SHRSSGG+DLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKN+TEKEIVKEIKEV+RQNFITHCLVSAMVVL
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL

Query:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPA
         VAWQVSEVSFILKLRDGLSNPFK+LARILKRNTTSAIQHKIEATELPA
Subjt:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPA

A0A6J1IS75 uncharacterized protein LOC1114794853.9e-82100Show/hide
Query:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL
        MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL
Subjt:  MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVL

Query:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ
        TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ
Subjt:  TVAWQVSEVSFILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein1.2e-1436.3Show/hide
Query:  AAEEMELISLAIRRLMEEKNNR--TGSHRSSGGNDLQFLSRLLSQVESTREQGR---------RKHSQQDDKIIQKNLTE---------KEIVKEIKEVK
        ++E++E +S AI +L+ EK  R  +G       +D  FLS L+SQ+ES   +G+          K  +  D    K  +E         +EI K+IK+VK
Subjt:  AAEEMELISLAIRRLMEEKNNR--TGSHRSSGGNDLQFLSRLLSQVESTREQGR---------RKHSQQDDKIIQKNLTE---------KEIVKEIKEVK

Query:  RQNFITHCLVSAMVVLTVAWQVSEVSFILKLRDGLSNPFKSLARIL
        +QN ITH L+SA ++LT+ WQ+SE S I  L+D +S+P +S+  +L
Subjt:  RQNFITHCLVSAMVVLTVAWQVSEVSFILKLRDGLSNPFKSLARIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGCGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGGTTGATGGAAGAGAAAAACAACAGAACCGGCTCTCACCGGAGCTCCGGCGGCAACGA
TCTGCAATTCCTTTCCCGATTACTCTCTCAGGTGGAATCAACAAGAGAACAGGGGCGGCGCAAGCACTCCCAACAGGATGATAAAATAATTCAGAAAAACTTAACAGAGA
AGGAGATAGTGAAAGAGATAAAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCCGCCATGGTTGTCCTCACCGTTGCTTGGCAAGTTTCTGAGGTGTCC
TTTATTTTGAAGCTCAGAGATGGGCTGAGTAACCCATTCAAGTCCCTGGCTAGAATCCTGAAAAGAAACACAACTTCAGCAATACAACATAAGATTGAAGCTACTGAATT
GCCTGCCTTACCTCATGTGAACCTACCAGATTTTCACTTGAATGACCACAAAATCCAGTAG
mRNA sequenceShow/hide mRNA sequence
AAAATAAAATTGGTAAAGAAAACCATTGGATGGCGGAAGCGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGGTTGATGGAAGAGAAAAACAACAGAACC
GGCTCTCACCGGAGCTCCGGCGGCAACGATCTGCAATTCCTTTCCCGATTACTCTCTCAGGTGGAATCAACAAGAGAACAGGGGCGGCGCAAGCACTCCCAACAGGATGA
TAAAATAATTCAGAAAAACTTAACAGAGAAGGAGATAGTGAAAGAGATAAAAGAAGTGAAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCCGCCATGGTTGTCCTCA
CCGTTGCTTGGCAAGTTTCTGAGGTGTCCTTTATTTTGAAGCTCAGAGATGGGCTGAGTAACCCATTCAAGTCCCTGGCTAGAATCCTGAAAAGAAACACAACTTCAGCA
ATACAACATAAGATTGAAGCTACTGAATTGCCTGCCTTACCTCATGTGAACCTACCAGATTTTCACTTGAATGACCACAAAATCCAGTAGTAGCATCATCAAGATCCCAA
GTTGTTTGTAATTTTTCAGGCATTATAACAATGTCTGTAATTTTCGGTCATTCATATTTCAATTTTCATGCTGTAGAAGTTCAAAGTTGCAATTTTTACGACGGGTATAA
TAGCATATAGTAGTATGAGCAAATCACTTGAATTTGAAGAAAGCATCTATTTCATCAATACTCAATGACAATCAAGAAATTCG
Protein sequenceShow/hide protein sequence
MAEAAAEEMELISLAIRRLMEEKNNRTGSHRSSGGNDLQFLSRLLSQVESTREQGRRKHSQQDDKIIQKNLTEKEIVKEIKEVKRQNFITHCLVSAMVVLTVAWQVSEVS
FILKLRDGLSNPFKSLARILKRNTTSAIQHKIEATELPALPHVNLPDFHLNDHKIQ