; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh14G017770 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh14G017770
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationCma_Chr14:12870885..12872905
RNA-Seq ExpressionCmaCh14G017770
SyntenyCmaCh14G017770
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582352.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.5e-10396.46Show/hide
Query:  VYTIWEMFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGV
        +Y IWEMF EVELVR+VEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK EVKNESESQCVSFPITFSCRTFLPLEGEILHGV
Subjt:  VYTIWEMFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGV

Query:  VRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        VRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCI KEFVMLASLEGNTSLGPIS SDSDEFDL
Subjt:  VRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

KAG7018763.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-13196.67Show/hide
Query:  TNVRGRCEANVSFFDLFHLYPPSDGWRYDSKSQSETLSPSGWVYTIWEMFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAV
        TNVRG+CEANVSFFDLFHL PPSDGW YDSKSQSETLSPSGWVYTIWEMFCEVELVR+VEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAV
Subjt:  TNVRGRCEANVSFFDLFHLYPPSDGWRYDSKSQSETLSPSGWVYTIWEMFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAV

Query:  TSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVL
        TSLKSIGK EVKNESESQCVSFPITF CRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVL
Subjt:  TSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVL

Query:  GVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        GVRWLEKRGCI KEFVMLASLEGNTSLGPIS SDSDEFDL
Subjt:  GVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

XP_022924760.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita moschata]1.5e-10197.92Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MFCEVELVR+VEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK EVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCI KEFVMLASLEGNTSLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

XP_022980115.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita maxima]2.4e-104100Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

XP_038877103.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]1.1e-9183.98Show/hide
Query:  LSPSGWVY--TIWEMFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPL
        L P  +++   IWEMF EVELV++VE+T EKEKRD +N QRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGK  V   S+SQCVSFPITFSCRTFLP 
Subjt:  LSPSGWVY--TIWEMFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPL

Query:  EGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSD
        EGEILHGVV HIFRRGLLLKCGPIKYVFLSA KMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSD
Subjt:  EGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSD

Query:  SDEFDL
        SDEFDL
Subjt:  SDEFDL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A3 Uncharacterized protein1.4e-8988.02Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF EVELVR+VE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFL+VTSL+SIGK  VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like1.4e-8988.02Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF EVELVR+VE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFL+VTSLKSIGK  VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        RGLLLKCGPIKY FLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like1.4e-8988.02Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF EVELVR+VE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFL+VTSLKSIGK  VKN  ESQCVSFPITF CRTFLP EGEILHGVVRHIF+
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        RGLLLKCGPIKY FLSARKMPTY YVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like7.1e-10297.92Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MFCEVELVR+VEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGK EVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCI KEFVMLASLEGNTSLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X11.2e-104100Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 71.6e-3441.53Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF +V+L  NV +  E     G+ L+R I+  LLE    +KA+K+ GY++AVT+L  IG+ +++  +    V FP+ FS  TF   +GEI+HGVV  + +
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPIS
         G+ ++CGPI+ V+LS  KMP Y Y+ GENP+F + +++ I  +  VR  V+G++W+E    + +EF  LASLEG+  LGP+S
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPIS

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein7.7e-3740.7Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKE-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV
        MF EVE+ R+V +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKE-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+      ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDE

Q8LE42 DNA-directed RNA polymerase IV subunit 71.1e-2739.23Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF +V+L  +V +  E +   G+ LQR I+  LLE   KEKA+KD GY +  T L++IG+ ++K ++    + FP+ F+   F   +GEI+HGVV  + +
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGP
         G+ LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E      K+F+ LAS++G+ +LGP
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain7.9e-2939.23Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF +V+L  +V +  E +   G+ LQR I+  LLE   KEKA+KD GY +  T L++IG+ ++K ++    + FP+ F+   F   +GEI+HGVV  + +
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGP
         G+ LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E      K+F+ LAS++G+ +LGP
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGP

AT4G14520.1 DNA-directed RNA polymerase II-related5.5e-3840.7Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKE-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV
        MF EVE+ R+V +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKE-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+      ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDE

AT4G14520.2 DNA-directed RNA polymerase II-related5.5e-3840.7Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKE-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV
        MF EVE+ R+V +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKE-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+      ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDE

AT4G14520.3 DNA-directed RNA polymerase II-related5.5e-3840.7Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKE-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV
        MF EVE+ R+V +    +  +G +  + I+  LL++L+ EKA ++HG++L +T+LKSIG       + +N  +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKE-----EVKNESESQCVSFPITFSCRTFLPLEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F     + I   VVVRF VL VR+ E+      ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain1.1e-3541.53Show/hide
Query:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR
        MF +V+L  NV +  E     G+ L+R I+  LLE    +KA+K+ GY++AVT+L  IG+ +++  +    V FP+ FS  TF   +GEI+HGVV  + +
Subjt:  MFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLENLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPIS
         G+ ++CGPI+ V+LS  KMP Y Y+ GENP+F + +++ I  +  VR  V+G++W+E    + +EF  LASLEG+  LGP+S
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSATIGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAACCATCAGCCCTCACTTATCCACTGCAATGCTTTTCACCAATCACAACATGGCCACACACTAATGTTAGAGGCCGATGTGAAGCAAATGTTTCCTTC
TTTGATTTATTTCATCTTTATCCTCCAAGTGATGGTTGGAGGTATGACTCAAAATCTCAGTCTGAAACACTTTCTCCAAGTGGATGGGTTTACACGATCTGGGAA
ATGTTTTGTGAAGTGGAACTAGTGAGAAATGTGGAAGTCACGGTGGAAAAGGAAAAGAGAGATGGTGTCAACTTGCAGAGGTACATTATAACATGTCTATTAGAA
AACCTCTTGAAGGAGAAGGCCAGCAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGGAAGGAAGAGGTCAAGAATGAGTCTGAGTCACAA
TGTGTTTCATTCCCCATTACCTTTAGTTGCCGAACCTTTTTGCCTTTGGAGGGAGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTA
AAATGTGGACCGATCAAGTACGTGTTTCTTTCAGCTCGTAAAATGCCAACCTACCATTATGTTGGAGGTGAAAATCCTGTCTTCTCGAGCACCCAATCTGCAACG
ATTGGAAATGATGTCGTTGTACGGTTCAGTGTGCTGGGTGTGAGATGGTTAGAGAAAAGAGGATGCATCAACAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGT
AACACCTCACTTGGACCCATTTCATTGTCCGACTCCGACGAGTTTGACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAACCATCAGCCCTCACTTATCCACTGCAATGCTTTTCACCAATCACAACATGGCCACACACTAATGTTAGAGGCCGATGTGAAGCAAATGTTTCCTTC
TTTGATTTATTTCATCTTTATCCTCCAAGTGATGGTTGGAGGTATGACTCAAAATCTCAGTCTGAAACACTTTCTCCAAGTGGATGGGTTTACACGATCTGGGAA
ATGTTTTGTGAAGTGGAACTAGTGAGAAATGTGGAAGTCACGGTGGAAAAGGAAAAGAGAGATGGTGTCAACTTGCAGAGGTACATTATAACATGTCTATTAGAA
AACCTCTTGAAGGAGAAGGCCAGCAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGGAAGGAAGAGGTCAAGAATGAGTCTGAGTCACAA
TGTGTTTCATTCCCCATTACCTTTAGTTGCCGAACCTTTTTGCCTTTGGAGGGAGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTA
AAATGTGGACCGATCAAGTACGTGTTTCTTTCAGCTCGTAAAATGCCAACCTACCATTATGTTGGAGGTGAAAATCCTGTCTTCTCGAGCACCCAATCTGCAACG
ATTGGAAATGATGTCGTTGTACGGTTCAGTGTGCTGGGTGTGAGATGGTTAGAGAAAAGAGGATGCATCAACAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGT
AACACCTCACTTGGACCCATTTCATTGTCCGACTCCGACGAGTTTGACTTGTAAATTTAGAAACAAACCCACAGAGTTGGTAATATTTCAATGTAATATATTCTT
ACGCGCCTTGCTCATTTCTTCCTCTCTTTCTTTGTCTTCCTGTTTGTTGTTCTTCATGGCAATGATAATTCAAGATTCTTGTGGAATATCCAAATAAAGCAACAG
AAATCTTCTTTTATTTTTCTGAATG
Protein sequenceShow/hide protein sequence
MAKPSALTYPLQCFSPITTWPHTNVRGRCEANVSFFDLFHLYPPSDGWRYDSKSQSETLSPSGWVYTIWEMFCEVELVRNVEVTVEKEKRDGVNLQRYIITCLLE
NLLKEKASKDHGYFLAVTSLKSIGKEEVKNESESQCVSFPITFSCRTFLPLEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSTQSAT
IGNDVVVRFSVLGVRWLEKRGCINKEFVMLASLEGNTSLGPISLSDSDEFDL