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CmaCh16G005170 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh16G005170
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr16:2651426..2654072
RNA-Seq ExpressionCmaCh16G005170
SyntenyCmaCh16G005170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015117.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-1392.68Show/hide
Query:  DFAGLNLYLRKQCRHMWEVFIGTLESAIEIAQFHAYRYSNL
        DFAGLNLYLRKQCRHMWEVFIGTLES IEIAQFH YRYS+L
Subjt:  DFAGLNLYLRKQCRHMWEVFIGTLESAIEIAQFHAYRYSNL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTTGGCAAATGTATTAGATCTGATTTTGCAGGCTTGAATCTGTATCTCAGGAAACAATGTCGTCATATGTGGGAGGTTTTCATCGGCACATTGGAATCGGCCAT
AGAAATTGCTCAGTTTCATGCATATAGGTATTCCAATCTATACCCGGTTAGCAAATCAATTTCAGCCACATGGAAGTTGAATAAGCCCTTCATTCTCTCGTTGGACAAAT
ACGCTTCTTGTTTGTATACACCACGTCAGGATATGCTTGTAAGGGCCTGGCTCTATTTGCCTTTTGTGAATTCAAAAGCAATAAGGTTATCTGGATGGAGCAACAGCCCT
TTGTTAAACACCCTTTTAACTGTTTTCGTCATTAAACCAATTGACCTGGGTGTTAACTGCAGCCCCACCGCCATTGGGAATGCTCTCCAGGACATTCTCGTGGCCTTTGG
GATAATAAATTCCAGTTCGCCCATCAAGCACCCATGGAGTTTCCTCACCCCTCACAGGGCTCTTGTTGCTCTTCAGTTCCTTGCTTTCTGTTTCAACTCTCTCCCTCATC
ATATCTGGAGAAGAGCTTTTTCTGTGGAAGCCCTTCCGCCCGATCGGCCTGCGCTAAAGAATTCAACCGAATCAGATAAACAAGCATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTTGGCAAATGTATTAGATCTGATTTTGCAGGCTTGAATCTGTATCTCAGGAAACAATGTCGTCATATGTGGGAGGTTTTCATCGGCACATTGGAATCGGCCAT
AGAAATTGCTCAGTTTCATGCATATAGGTATTCCAATCTATACCCGGTTAGCAAATCAATTTCAGCCACATGGAAGTTGAATAAGCCCTTCATTCTCTCGTTGGACAAAT
ACGCTTCTTGTTTGTATACACCACGTCAGGATATGCTTGTAAGGGCCTGGCTCTATTTGCCTTTTGTGAATTCAAAAGCAATAAGGTTATCTGGATGGAGCAACAGCCCT
TTGTTAAACACCCTTTTAACTGTTTTCGTCATTAAACCAATTGACCTGGGTGTTAACTGCAGCCCCACCGCCATTGGGAATGCTCTCCAGGACATTCTCGTGGCCTTTGG
GATAATAAATTCCAGTTCGCCCATCAAGCACCCATGGAGTTTCCTCACCCCTCACAGGGCTCTTGTTGCTCTTCAGTTCCTTGCTTTCTGTTTCAACTCTCTCCCTCATC
ATATCTGGAGAAGAGCTTTTTCTGTGGAAGCCCTTCCGCCCGATCGGCCTGCGCTAAAGAATTCAACCGAATCAGATAAACAAGCATTCTAA
Protein sequenceShow/hide protein sequence
MKLGKCIRSDFAGLNLYLRKQCRHMWEVFIGTLESAIEIAQFHAYRYSNLYPVSKSISATWKLNKPFILSLDKYASCLYTPRQDMLVRAWLYLPFVNSKAIRLSGWSNSP
LLNTLLTVFVIKPIDLGVNCSPTAIGNALQDILVAFGIINSSSPIKHPWSFLTPHRALVALQFLAFCFNSLPHHIWRRAFSVEALPPDRPALKNSTESDKQAF