; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh16G005180 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh16G005180
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionLate embryogenesis abundant protein
Genome locationCma_Chr16:2653399..2654253
RNA-Seq ExpressionCmaCh16G005180
SyntenyCmaCh16G005180
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148978.1 uncharacterized protein LOC101205531 [Cucumis sativus]1.2e-4391Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGA +MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL SIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
XP_022931383.1 uncharacterized protein LOC111437581 [Cucurbita moschata]1.1e-4999.01Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQ+MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
XP_022984605.1 uncharacterized protein LOC111482845 [Cucurbita maxima]5.0e-50100Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
XP_023552297.1 uncharacterized protein LOC111810002 [Cucurbita pepo subsp. pepo]2.5e-4998.02Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAF+RGAQ+MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
XP_038884831.1 uncharacterized protein LOC120075477 [Benincasa hispida]7.0e-4491Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAF RGAQ+MNSMFFKPIGRKGFHRKSSSPDM+RERVETESKE+KSNKS V GE TPWVLDGRTGIYYPKGHE VLESIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
TrEMBL top hitse value%identityAlignment
A0A0A0KX78 Uncharacterized protein5.8e-4491Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGA +MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL SIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
A0A1S3BTQ2 uncharacterized protein LOC1034930562.2e-4389Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGA +MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL+ IP+GGGA VNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
A0A6J1C4X8 uncharacterized protein LOC1110083061.2e-4188.12Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQ+MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKE+KSNKS V GE TPW+LD RTGIYYPKGHE VLESIP+GGGAAVN QVN F+DEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
A0A6J1EYH0 uncharacterized protein LOC1114375815.4e-5099.01Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQ+MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
A0A6J1J914 uncharacterized protein LOC1114828452.4e-50100Show/hide
Query:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
        MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDEN

Query:  S
        S
Subjt:  S
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein8.0e-1440.59Show/hide
Query:  RGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRG---------EETPWVLDGRTGIYYPKGHENVLESI-PNGGGAAVNTQVNWF
        RGAQ+MN+MF KP+ RK  H+KS+S D++R+ V+TE          +RG           + WV    TGIYYPKG E V++ + P   G+  +  VNWF
Subjt:  RGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRG---------EETPWVLDGRTGIYYPKGHENVLESI-PNGGGAAVNTQVNWF

Query:  N
        +
Subjt:  N
AT3G19550.1 unknown protein8.9e-0532.84Show/hide
Query:  GRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGA
        GR G   K++  + M   +    +++  +     GEE  WV   RTGI++P G E+V+E +PNG  +
Subjt:  GRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGCATTTGTGAGAGGGGCTCAGTCAATGAACTCCATGTTCTTCAAGCCGATCGGGCGGAAGGGCTTCCACAGAAAAAGCTCTTCTCCAGATATGATGAGGGA
GAGAGTTGAAACAGAAAGCAAGGAACTGAAGAGCAACAAGAGCCCTGTGAGGGGTGAGGAAACTCCATGGGTGCTTGATGGGCGAACTGGAATTTATTATCCCAAAGGCC
ACGAGAATGTCCTGGAGAGCATTCCCAATGGCGGTGGGGCTGCAGTTAACACCCAGGTCAATTGGTTTAATGACGAAAACAGTTAA
mRNA sequenceShow/hide mRNA sequence
CACTTTTCACCTATATATACAAAACAACCAAATTCCCATTTGTTCATCCCATCTTCACTTACCTCATTGGGAGGAAGGCATGGCCACTGCATTTGTGAGAGGGGCTCAGT
CAATGAACTCCATGTTCTTCAAGCCGATCGGGCGGAAGGGCTTCCACAGAAAAAGCTCTTCTCCAGATATGATGAGGGAGAGAGTTGAAACAGAAAGCAAGGAACTGAAG
AGCAACAAGAGCCCTGTGAGGGGTGAGGAAACTCCATGGGTGCTTGATGGGCGAACTGGAATTTATTATCCCAAAGGCCACGAGAATGTCCTGGAGAGCATTCCCAATGG
CGGTGGGGCTGCAGTTAACACCCAGGTCAATTGGTTTAATGACGAAAACAGTTAAAAGGGTGTTTAACAAAGGGCTGTTGCTCCATCCAGATAACCTTATTGCTTTTGAA
TTCACAAAAGGCAAATAGAGCCAGGCCCCTTTGTTGTTAAACAGATTAAATCAACAGTATCCATTTAAAAAGCAATTGTATTAAATAAACCTCACTAAGTCCACAAGCCA
ACAACAAGTACAGAAAATTTCCCA
Protein sequenceShow/hide protein sequence
MATAFVRGAQSMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSPVRGEETPWVLDGRTGIYYPKGHENVLESIPNGGGAAVNTQVNWFNDENS