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CmaCh16G010260 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh16G010260
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionF-box protein At4g35733-like
Genome locationCma_Chr16:7888925..7889518
RNA-Seq ExpressionCmaCh16G010260
SyntenyCmaCh16G010260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577576.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4749.09Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------
        MRDETLGIVLFNPF+          TYD+IE I GHIIKAILTKDPSLYPN+YMVV IFGTYKRLCLIR                               
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------

Query:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------
         Y NVWK E+ENS+DESSSI I VKMVHTIE   +V SYIT        VVLRILD GEEQFE VDFEVYKLIHENEDEMR AVE +             
Subjt:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------

Query:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD
                            D     + V  LDG                      AQ NLPSP+WIIPTIC  D
Subjt:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD

XP_022923263.1 probable F-box protein At4g22165 [Cucurbita moschata]2.5e-4950.18Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------
        MRDETLGIVLFNPF+          TYD+IE I GHIIKAILTKDPSLYPN+YMVVAIFGTYKRLCLIR                               
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------

Query:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------
         Y NVWK E+ENS+DESSSI I VKMVHTIEM  +V SYIT        VVLRILD GEEQFE VDFEVYKLIHENEDEMR AVE +             
Subjt:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------

Query:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD
                            D     + V  LDG                      AQ NLPSPIWIIPTIC  D
Subjt:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD

XP_022923264.1 uncharacterized protein LOC111431008 [Cucurbita moschata]5.1e-4760.2Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------
        MRDETLGIVLFNPF+          TYD+IE I GHIIKAILTKDPSLYPN+YMVV IFGTYKRLCLIR                               
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------

Query:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENEDEMRTAVEVKSLD
         Y NVWK E+ENS+DESSSI I VKMVHTIEM  +V SYIT        VVLRILD GEEQFE VDFEVYKLIH          ENEDEMR AVE+KSLD
Subjt:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENEDEMRTAVEVKSLD

Query:  G
        G
Subjt:  G

XP_023552958.1 probable F-box protein At4g22165 [Cucurbita pepo subsp. pepo]9.3e-4950.18Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------
        MRDETLGIVLFNPF+          TYD+IE I GHIIKAILTKDPSLYPN+YMVVAIFGTYKRLCLIR                               
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------

Query:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------
         Y NVWK E+ENS+DESSSI I VKMVHTIEM   V SYIT        VVLRILD GEEQFE VDFEVYKLIHENEDEMR AVE +             
Subjt:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------

Query:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD
                            D     + V  LDG                      AQ NLPSPIWIIPTIC  D
Subjt:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD

XP_023552959.1 F-box protein At2g17036-like [Cucurbita pepo subsp. pepo]6.0e-4849.45Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------
        MRDETLGIVLFNPF+          TY++IE I GHIIKAILTKDPSLYPN+YMVVAIFGTYKRLCLIR                               
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------

Query:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------
         Y NVWK E+ENS+DESSSI I VKMVHTIEM  +V SYIT        VVLRILD GEEQFE VDFEVYKLIHENEDEMR AVE +             
Subjt:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------

Query:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD
                            D     + V  LDG                      AQ NL SPIWIIPTIC +D
Subjt:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD

TrEMBL top hitse value%identityAlignment
A0A6J1E5P5 probable F-box protein At1g657401.7e-4346.55Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR--------YW---------------------
        MRDETLGIVLFNPF+          TYD+IE I GHIIKAILTKDPSLYPN+YMVV IFGTYKRLCLIR        Y+                     
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR--------YW---------------------

Query:  ---NVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------
           +VWK E++NS+DESSSI I VKMVHT  +R I  +YIT        VVLRI + GEEQFE VDFEVYKLIHENEDE+R AVE +             
Subjt:  ---NVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------

Query:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD
                            D     + V  LDG                      AQ NLPSP+WIIPTIC  D
Subjt:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD

A0A6J1E5W8 uncharacterized protein LOC1114310082.5e-4760.2Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------
        MRDETLGIVLFNPF+          TYD+IE I GHIIKAILTKDPSLYPN+YMVV IFGTYKRLCLIR                               
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------

Query:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENEDEMRTAVEVKSLD
         Y NVWK E+ENS+DESSSI I VKMVHTIEM  +V SYIT        VVLRILD GEEQFE VDFEVYKLIH          ENEDEMR AVE+KSLD
Subjt:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENEDEMRTAVEVKSLD

Query:  G
        G
Subjt:  G

A0A6J1E6C7 probable F-box protein At1g657401.5e-2335.06Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR----YWN------------------------
        M +ETL + LFNPF+            DE +     I+KAILTKDPSLYPN+YMVVAI+ +Y RLCL+R     W                         
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR----YWN------------------------

Query:  ----VWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE----------DEM
            VWK E++N DDESSSI I +KMVH     D V+SYIT        +VLR +   + Q E   F+VYKLI E E++M  AV+ +          D  
Subjt:  ----VWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE----------DEM

Query:  RTAVEVKSL-----------------------------------------DGAQTNLPSPIWIIPTICLDD
           V  K                                           D A  NLP PIWIIPTIC  D
Subjt:  RTAVEVKSL-----------------------------------------DGAQTNLPSPIWIIPTICLDD

A0A6J1E923 probable F-box protein At4g221651.2e-4950.18Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------
        MRDETLGIVLFNPF+          TYD+IE I GHIIKAILTKDPSLYPN+YMVVAIFGTYKRLCLIR                               
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------

Query:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------
         Y NVWK E+ENS+DESSSI I VKMVHTIEM  +V SYIT        VVLRILD GEEQFE VDFEVYKLIHENEDEMR AVE +             
Subjt:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------

Query:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD
                            D     + V  LDG                      AQ NLPSPIWIIPTIC  D
Subjt:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD

A0A6J1EBA6 F-box protein At4g35733-like1.2e-4648.36Show/hide
Query:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------
        MRDETLGIVLFNPF+          TYD+IE I GHIIKAILTKDPSLYPN+YMVV+IFGTYKRL LIR                               
Subjt:  MRDETLGIVLFNPFT----------TYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIR-------------------------------

Query:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------
         Y NVWK E+ENS+DESSSI I VKMVHTIEM  +V SYIT        +VLRILD GEEQFE V FEVYKLIHENEDEMR AVE +             
Subjt:  -YWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYIT--------VVLRILDFGEEQFEMVDFEVYKLIHENEDEMRTAVENE-------------

Query:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD
                            D     + V  LDG                      AQ NLPSP+WIIPTIC  D
Subjt:  --------------------DEMRTAVEVKSLDG----------------------AQTNLPSPIWIIPTICLDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGATGAGACACTCGGTATTGTTTTATTCAACCCTTTTACTACCTATGATGAAATTGAGGGAATTCTAGGCCACATAATTAAAGCAATACTAACCAAAGATCCATC
GTTATATCCAAACAATTATATGGTTGTAGCTATCTTTGGTACATATAAAAGATTGTGTCTGATAAGATACTGGAATGTTTGGAAATTTGAAATTGAGAATAGTGACGATG
AAAGTTCATCTATTTTTATTTATGTAAAGATGGTCCACACAATAGAAATGAGGGACATAGTTATGTCGTATATTACGGTTGTTTTGAGGATATTAGACTTTGGAGAAGAA
CAATTCGAGATGGTGGACTTTGAAGTTTACAAACTTATCCATGAGAATGAAGATGAGATGCGAACCGCGGTAGAGAATGAAGATGAGATGCGAACCGCGGTAGAGGTGAA
GAGCTTAGATGGTGCACAAACAAATTTGCCTAGTCCCATATGGATCATCCCAACCATATGCTTGGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTGATGAGACACTCGGTATTGTTTTATTCAACCCTTTTACTACCTATGATGAAATTGAGGGAATTCTAGGCCACATAATTAAAGCAATACTAACCAAAGATCCATC
GTTATATCCAAACAATTATATGGTTGTAGCTATCTTTGGTACATATAAAAGATTGTGTCTGATAAGATACTGGAATGTTTGGAAATTTGAAATTGAGAATAGTGACGATG
AAAGTTCATCTATTTTTATTTATGTAAAGATGGTCCACACAATAGAAATGAGGGACATAGTTATGTCGTATATTACGGTTGTTTTGAGGATATTAGACTTTGGAGAAGAA
CAATTCGAGATGGTGGACTTTGAAGTTTACAAACTTATCCATGAGAATGAAGATGAGATGCGAACCGCGGTAGAGAATGAAGATGAGATGCGAACCGCGGTAGAGGTGAA
GAGCTTAGATGGTGCACAAACAAATTTGCCTAGTCCCATATGGATCATCCCAACCATATGCTTGGATGATTAA
Protein sequenceShow/hide protein sequence
MRDETLGIVLFNPFTTYDEIEGILGHIIKAILTKDPSLYPNNYMVVAIFGTYKRLCLIRYWNVWKFEIENSDDESSSIFIYVKMVHTIEMRDIVMSYITVVLRILDFGEE
QFEMVDFEVYKLIHENEDEMRTAVENEDEMRTAVEVKSLDGAQTNLPSPIWIIPTICLDD