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CmaCh17G001090 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh17G001090
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCLAVATA3/ESR-related protein
Genome locationCma_Chr17:529756..535895
RNA-Seq ExpressionCmaCh17G001090
SyntenyCmaCh17G001090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3595.4Show/hide
Query:  MAKFEDHYFSTSLTTSTKSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSKAMAEQAFSRPQFEASMHEVPSGPNPTSN
        MAKFED+YFSTSLTTSTKSQACFFLFLLVLLLL VPYRFST PSSMASTSNPSRPPSSKAMAEQAF RPQFEASMHEVPSGPNPTSN
Subjt:  MAKFEDHYFSTSLTTSTKSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSKAMAEQAFSRPQFEASMHEVPSGPNPTSN

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1867.71Show/hide
Query:  MAKFEDHYFSTSLTTSTKSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSK-AMAEQAFSRP--------QFEASMHEVPSGPNPTSN
        MA+ ++HYFSTSL TSTKS+ACFFLFLL+L     PY FST PSS AS S PSRPPSS  AM EQAFS P        QFEA+MHEVPSGPNPT+N
Subjt:  MAKFEDHYFSTSLTTSTKSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSK-AMAEQAFSRP--------QFEASMHEVPSGPNPTSN

KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]1.4e-0964.29Show/hide
Query:  KSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSKAMAEQAFSRPQFEASMHEVPSGPNPTSN
        KSQACFFLFLLVLLLLVVP+R ST P++      PSRPPS+            FEA+MHEVPSGPNPTSN
Subjt:  KSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSKAMAEQAFSRPQFEASMHEVPSGPNPTSN

TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein7.0e-1064.29Show/hide
Query:  KSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSKAMAEQAFSRPQFEASMHEVPSGPNPTSN
        KSQACFFLFLLVLLLLVVP+R ST P++      PSRPPS+            FEA+MHEVPSGPNPTSN
Subjt:  KSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSKAMAEQAFSRPQFEASMHEVPSGPNPTSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAATTTGAAGATCATTATTTCTCGACATCCTTAACTACTTCAACCAAGTCTCAAGCTTGCTTCTTCCTCTTCCTCCTCGTTCTTCTCCTCCTCGTCGTTCCTTA
TCGATTCTCAACTGGGCCGAGCTCCATGGCTTCAACTAGTAATCCATCCCGTCCTCCTTCGTCTAAGGCCATGGCAGAACAAGCCTTCTCTAGACCTCAGTTTGAAGCAT
CTATGCATGAAGTTCCTAGTGGCCCAAATCCCACATCCAACAACTCCCCCAGCTCTCTGCTTCTTCTTCTTCCTCCATTTTCCCTTCTTGGGCTCTGCAACTTTCTTCTT
CAATCCCTTCTGTGTTGGGGCCATTTCCTTCGGTTTGTGTCTGGTTCGCTAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAATTTGAAGATCATTATTTCTCGACATCCTTAACTACTTCAACCAAGTCTCAAGCTTGCTTCTTCCTCTTCCTCCTCGTTCTTCTCCTCCTCGTCGTTCCTTA
TCGATTCTCAACTGGGCCGAGCTCCATGGCTTCAACTAGTAATCCATCCCGTCCTCCTTCGTCTAAGGCCATGGCAGAACAAGCCTTCTCTAGACCTCAGTTTGAAGCAT
CTATGCATGAAGTTCCTAGTGGCCCAAATCCCACATCCAACAACTCCCCCAGCTCTCTGCTTCTTCTTCTTCCTCCATTTTCCCTTCTTGGGCTCTGCAACTTTCTTCTT
CAATCCCTTCTGTGTTGGGGCCATTTCCTTCGGTTTGTGTCTGGTTCGCTAACTTCATGA
Protein sequenceShow/hide protein sequence
MAKFEDHYFSTSLTTSTKSQACFFLFLLVLLLLVVPYRFSTGPSSMASTSNPSRPPSSKAMAEQAFSRPQFEASMHEVPSGPNPTSNNSPSSLLLLLPPFSLLGLCNFLL
QSLLCWGHFLRFVSGSLTS