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CmaCh17G002500 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh17G002500
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCyclin T1
Genome locationCma_Chr17:1284176..1285907
RNA-Seq ExpressionCmaCh17G002500
SyntenyCmaCh17G002500
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0007049 - cell cycle (biological process)
GO:0032786 - positive regulation of DNA-templated transcription, elongation (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0051301 - cell division (biological process)
GO:0008024 - cyclin/CDK positive transcription elongation factor complex (cellular component)
GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domainsIPR036915 - Cyclin-like superfamily
IPR043198 - Cyclin/Cyclin-like subunit Ssn8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574995.1 Cyclin-T1-4, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2285.14Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
KAG7013566.1 Cyclin-T1-4 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2285.14Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
XP_022959015.1 cyclin-T1-3-like isoform X1 [Cucurbita moschata]3.5e-2283.78Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNI QEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
XP_023006030.1 cyclin-T1-3-like isoform X1 [Cucurbita maxima]1.2e-2285.14Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
XP_023547552.1 cyclin-T1-3-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-2285.14Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
TrEMBL top hitse value%identityAlignment
A0A0A0KEU6 Uncharacterized protein8.4e-2283.33Show/hide
Query:  LLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L   +LFS    WLRSSLWLQFKP QIAAGAAYLSAKLL++DFAPYQNILQEFQATPAILQDVAQQLMELF
Subjt:  LLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
A0A6J1EUR8 cyclin-T1-5-like isoform X14.9e-2282.43Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLL++DFAPYQNILQEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
A0A6J1H3Q1 cyclin-T1-3-like isoform X11.7e-2283.78Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNI QEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
A0A6J1KBY0 cyclin-T1-5-like4.9e-2282.43Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLL++DFAPYQNILQEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
A0A6J1KZ23 cyclin-T1-3-like isoform X15.8e-2385.14Show/hide
Query:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
        +L+++A+ L S G   LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
Subjt:  VLLDIAI-LFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF
SwissProt top hitse value%identityAlignment
Q2QQS5 Cyclin-T1-41.2e-0650Show/hide
Query:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
        LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L++V+ Q++EL+
Subjt:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
Q2RAC5 Cyclin-T1-31.2e-0650Show/hide
Query:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
        LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L++V+ Q++EL+
Subjt:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
Q56YF8 Cyclin-T1-21.9e-0749.15Show/hide
Query:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL-QEFQATPAILQDVAQQLMELF
        LR++L LQ++PH IAAGA  L+A+L  VD   Y+ +L QEF  TP  L+D+  Q++EL+
Subjt:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL-QEFQATPAILQDVAQQLMELF
Q8GYM6 Cyclin-T1-41.8e-0539.42Show/hide
Query:  FNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQL
        FN+YH    L    ++F             L  +A  F N    LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q+
Subjt:  FNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQL

Query:  MELF
        +EL+
Subjt:  MELF
Q9FKE6 Cyclin-T1-54.3e-0751.67Show/hide
Query:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
        LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Subjt:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
Arabidopsis top hitse value%identityAlignment
AT4G19560.1 Cyclin family protein1.4e-0849.15Show/hide
Query:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL-QEFQATPAILQDVAQQLMELF
        LR++L LQ++PH IAAGA  L+A+L  VD   Y+ +L QEF  TP  L+D+  Q++EL+
Subjt:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL-QEFQATPAILQDVAQQLMELF
AT4G19600.1 Cyclin family protein1.3e-0639.42Show/hide
Query:  FNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQL
        FN+YH    L    ++F             L  +A  F N    LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q+
Subjt:  FNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQL

Query:  MELF
        +EL+
Subjt:  MELF
AT5G45190.1 Cyclin family protein3.1e-0851.67Show/hide
Query:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
        LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Subjt:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
AT5G45190.2 Cyclin family protein3.1e-0851.67Show/hide
Query:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF
        LR+SL LQFKPH IAAGA +L+AK L V        +  QEF  TP  L+DV+ Q++EL+
Subjt:  LRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNIL--QEFQATPAILQDVAQQLMELF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTAACATATATCATATGATAATGATATTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTAGACATTGC
CATCCTATTTAGTAATGGACTCAGATGGCTAAGGAGCTCACTCTGGCTTCAGTTTAAGCCCCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTACTGCATG
TGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCAACGCCTGCTATTCTCCAAGATGTGGCCCAGCAGTTGATGGAGCTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTAACATATATCATATGATAATGATATTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTAGACATTGC
CATCCTATTTAGTAATGGACTCAGATGGCTAAGGAGCTCACTCTGGCTTCAGTTTAAGCCCCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTACTGCATG
TGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCAACGCCTGCTATTCTCCAAGATGTGGCCCAGCAGTTGATGGAGCTTTTCTAAAGTGAAAGCTCGATA
ATGATGAAGCTTTTAGTCTGGTGAAATGATGTGCAATGATGGGTAAACATAACATATTTATGATTTAACATGAATCCTGACAGTCTTAAATGGTTAAATCCTGACAGTTT
CCTTAGGTTATGTAGTGACTGTTGGTAGTTTTAACATGAATGGTTCTCAATTCATTTCCATGTGCAAAACAGTGGTTTAGAAGTACCGTAGGAAGACCTGTACTCAATTG
GCGAACGGATGGTTATGTTATACAAAATGGCTCGCTTCTGATCTGCTCTGCTCTCTCCTTTAAATGTCATTGCCTTTTGATTCCTTTTTTTATTTATAGTCGTTCCGTCG
TACATCTATTCCATAATGTTAGAATAGTTGATCCGCAGATATTCTCTTTTTTGGGCTTTCCCTTTCAAGCTCCTTCTCATGGTTTTAAAATGTGTCTTCTAGGGAAAAGT
TTTCACATCTAGAGAATGTTTTGTTTTCCTCTTCAACCGATGTAAGATCTCACAATCCACCTCTTTTGGTGCTCATAGTCCCCGTTGACATTGATACCATTTGTAACAGC
TCAAACTTCACTAACTTCTTTGAGTTTTTCCTTCTAG
Protein sequenceShow/hide protein sequence
MGFNIYHMIMILSAIFQRFLEIFYLSCCFLVVLLDIAILFSNGLRWLRSSLWLQFKPHQIAAGAAYLSAKLLHVDFAPYQNILQEFQATPAILQDVAQQLMELF