; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh17G004860 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh17G004860
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionagamous-like MADS-box protein AGL62
Genome locationCma_Chr17:3016126..3016575
RNA-Seq ExpressionCmaCh17G004860
SyntenyCmaCh17G004860
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022974284.1 agamous-like MADS-box protein AGL62 [Cucurbita maxima]2.8e-6597.69Show/hide
Query:  VFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK
        VFCFGHPNVD+ LDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK
Subjt:  VFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK

Query:  KVEKMIRGPLLPSSFHLAKNHHVATRLGFF
        KVEKMIRGPLLPSSFHLAKNH+VATRLGFF
Subjt:  KVEKMIRGPLLPSSFHLAKNHHVATRLGFF

XP_022975744.1 agamous-like MADS-box protein AGL62, partial [Cucurbita maxima]1.3e-5996.72Show/hide
Query:  VFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK
        VFCFGHPNVD+LLDRYLTRNLS PKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNG FWREEAIE MRLEEWKEFRLSFMDSRAKVAK
Subjt:  VFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK

Query:  KVEKMIRGPLLPSSFHLAKNHH
        KVEKMIRGPLLPSSFHLAKNHH
Subjt:  KVEKMIRGPLLPSSFHLAKNHH

XP_023006019.1 agamous-like MADS-box protein AGL62 [Cucurbita maxima]5.1e-7597.99Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL
        MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLS PKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL

Query:  EEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVATRLGFF
        EEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHH  TRLGFF
Subjt:  EEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVATRLGFF

XP_023006252.1 agamous-like MADS-box protein AGL62 [Cucurbita maxima]2.2e-5471.34Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL
        ++VLCGAEVA I FSPNDKVFCFGHPNVD+LLDRYLT NLSPPKPAE++VPV EFNRDFADLV +FE  KKRAEEL   SE+SRN+G FW EEA+E MRL
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL

Query:  EEWKEFRLSFMDSRAKVAKKVEKM----IRGPLLPS-----------SFHLAKNHHVATRLGFF
        EE KEFR S MD RAKVA+KVEK+    I GPLLP+           SFHLA NHHVAT LGFF
Subjt:  EEWKEFRLSFMDSRAKVAKKVEKM----IRGPLLPS-----------SFHLAKNHHVATRLGFF

XP_023549141.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]1.4e-5369.88Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL
        ++VLCGAEVA I FSPNDKVFCFGHP+VD+LLDRYLT NLSPPKPAE++VPV EFNRDFADLV +FE  KKRAEEL   SE+SRN+G FW EEA+E MRL
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL

Query:  EEWKEFRLSFMDSRAKVAKKVEKM----IRGPLLPS-------------SFHLAKNHHVATRLGFF
        EE KEFR S MD RAKVA+KVEK+    I GPLLP+             SFHLA NHHVAT LGFF
Subjt:  EEWKEFRLSFMDSRAKVAKKVEKM----IRGPLLPS-------------SFHLAKNHHVATRLGFF

TrEMBL top hitse value%identityAlignment
A0A6J1H4M6 agamous-like MADS-box protein AGL627.0e-5469.88Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL
        ++VLCGAEVA I FSPNDKVFCFGHP+VD+LLDRYLT NLSPPKPAE++VPV EFNRDFADLV +FE  KKRAEEL   SE+SRN+G FW EEA+E MRL
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL

Query:  EEWKEFRLSFMDSRAKVAKKVEKM----IRGPLLPS-------------SFHLAKNHHVATRLGFF
        EE KEFR S MD RAKVA+KVEK+    I GPLLP+             SFHLA NHHVAT LGFF
Subjt:  EEWKEFRLSFMDSRAKVAKKVEKM----IRGPLLPS-------------SFHLAKNHHVATRLGFF

A0A6J1IH57 agamous-like MADS-box protein AGL621.4e-6597.69Show/hide
Query:  VFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK
        VFCFGHPNVD+ LDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK
Subjt:  VFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK

Query:  KVEKMIRGPLLPSSFHLAKNHHVATRLGFF
        KVEKMIRGPLLPSSFHLAKNH+VATRLGFF
Subjt:  KVEKMIRGPLLPSSFHLAKNHHVATRLGFF

A0A6J1ILG9 agamous-like MADS-box protein AGL626.5e-6096.72Show/hide
Query:  VFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK
        VFCFGHPNVD+LLDRYLTRNLS PKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNG FWREEAIE MRLEEWKEFRLSFMDSRAKVAK
Subjt:  VFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKEFRLSFMDSRAKVAK

Query:  KVEKMIRGPLLPSSFHLAKNHH
        KVEKMIRGPLLPSSFHLAKNHH
Subjt:  KVEKMIRGPLLPSSFHLAKNHH

A0A6J1KVC9 agamous-like MADS-box protein AGL621.1e-5471.34Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL
        ++VLCGAEVA I FSPNDKVFCFGHPNVD+LLDRYLT NLSPPKPAE++VPV EFNRDFADLV +FE  KKRAEEL   SE+SRN+G FW EEA+E MRL
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL

Query:  EEWKEFRLSFMDSRAKVAKKVEKM----IRGPLLPS-----------SFHLAKNHHVATRLGFF
        EE KEFR S MD RAKVA+KVEK+    I GPLLP+           SFHLA NHHVAT LGFF
Subjt:  EEWKEFRLSFMDSRAKVAKKVEKM----IRGPLLPS-----------SFHLAKNHHVATRLGFF

A0A6J1L0Z5 agamous-like MADS-box protein AGL622.5e-7597.99Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL
        MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLS PKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRL

Query:  EEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVATRLGFF
        EEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHH  TRLGFF
Subjt:  EEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVATRLGFF

SwissProt top hitse value%identityAlignment
O64703 Agamous-like MADS-box protein AGL297.5e-0528.57Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTR----NLSPPKPAENFVPVTEFNRDFADLVS-KFEVAKKRAEELTHVSEKSRNNGEFWREEAI
        +A LC AE+  + FSP  K F +G PN+D + +R++      +    + + N+ P  +   +  DL++ + E  K+R E+     EK  + G+   +E+I
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTR----NLSPPKPAENFVPVTEFNRDFADLVS-KFEVAKKRAEELTHVSEKSRNNGEFWREEAI

Query:  ERMRLEEWKEFR
        E + L+E  E++
Subjt:  ERMRLEEWKEFR

O80807 Agamous-like MADS-box protein AGL232.1e-0730.93Show/hide
Query:  LCGAEVASIAFSPNDKVFCFGHPNVDMLLDRY----LTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIE
        LC A++A I FSP  KVF FGHPNVD+LLD +    +  N +    +   + V   N+ + ++ ++ E  +K  +       ++ N  E+W +  +E
Subjt:  LCGAEVASIAFSPNDKVFCFGHPNVDMLLDRY----LTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIE

Q4PSU4 Agamous-like MADS-box protein AGL617.8e-1030.33Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENF----VPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKS-RNNGEFWREEAI
        +  LCGAE+  I FSP  K F FGHP+V+ +LDRY++RN      ++          E N     ++S+ E  KK+ + +  + ++S R +   W E+ +
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENF----VPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKS-RNNGEFWREEAI

Query:  ERMRLEEWKEFRLSFMDSRAKV
        E M + + +E + +  + R  V
Subjt:  ERMRLEEWKEFRLSFMDSRAKV

Q9FKK2 Agamous-like MADS-box protein AGL621.0e-1436.52Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENF--------VPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWRE
        +  LCGAEVA + FSP  KVF FGHPNVD ++DR++  N  PP    N           V + N     ++S+ E  KK+ +EL  + EK++  G +W E
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENF--------VPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWRE

Query:  EAIERMRLEEWKEFR
        + +E + L + + F+
Subjt:  EAIERMRLEEWKEFR

Q9LMM8 Agamous-like MADS-box protein AGL286.8e-0623.13Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLD----RYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIE
        +  LC AE+A I FSP+ K + FGHPNV+ LLD    R +  N +    +   + +   N    +++++ E  ++  + +     ++++  ++WR    E
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLD----RYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIE

Query:  RMRLEEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVA
         + L +    +      + +V +KV ++    L   +F++  + +VA
Subjt:  RMRLEEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVA

Arabidopsis top hitse value%identityAlignment
AT1G01530.1 AGAMOUS-like 284.8e-0723.13Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLD----RYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIE
        +  LC AE+A I FSP+ K + FGHPNV+ LLD    R +  N +    +   + +   N    +++++ E  ++  + +     ++++  ++WR    E
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLD----RYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIE

Query:  RMRLEEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVA
         + L +    +      + +V +KV ++    L   +F++  + +VA
Subjt:  RMRLEEWKEFRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVA

AT1G65360.1 AGAMOUS-like 231.5e-0830.93Show/hide
Query:  LCGAEVASIAFSPNDKVFCFGHPNVDMLLDRY----LTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIE
        LC A++A I FSP  KVF FGHPNVD+LLD +    +  N +    +   + V   N+ + ++ ++ E  +K  +       ++ N  E+W +  +E
Subjt:  LCGAEVASIAFSPNDKVFCFGHPNVDMLLDRY----LTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIE

AT2G24840.1 AGAMOUS-like 615.5e-1130.33Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENF----VPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKS-RNNGEFWREEAI
        +  LCGAE+  I FSP  K F FGHP+V+ +LDRY++RN      ++          E N     ++S+ E  KK+ + +  + ++S R +   W E+ +
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENF----VPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKS-RNNGEFWREEAI

Query:  ERMRLEEWKEFRLSFMDSRAKV
        E M + + +E + +  + R  V
Subjt:  ERMRLEEWKEFRLSFMDSRAKV

AT2G34440.1 AGAMOUS-like 295.3e-0628.57Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTR----NLSPPKPAENFVPVTEFNRDFADLVS-KFEVAKKRAEELTHVSEKSRNNGEFWREEAI
        +A LC AE+  + FSP  K F +G PN+D + +R++      +    + + N+ P  +   +  DL++ + E  K+R E+     EK  + G+   +E+I
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTR----NLSPPKPAENFVPVTEFNRDFADLVS-KFEVAKKRAEELTHVSEKSRNNGEFWREEAI

Query:  ERMRLEEWKEFR
        E + L+E  E++
Subjt:  ERMRLEEWKEFR

AT5G60440.1 AGAMOUS-like 627.4e-1636.52Show/hide
Query:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENF--------VPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWRE
        +  LCGAEVA + FSP  KVF FGHPNVD ++DR++  N  PP    N           V + N     ++S+ E  KK+ +EL  + EK++  G +W E
Subjt:  MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENF--------VPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWRE

Query:  EAIERMRLEEWKEFR
        + +E + L + + F+
Subjt:  EAIERMRLEEWKEFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGCTTTGCGGAGCAGAGGTTGCCAGCATTGCCTTCTCTCCAAACGATAAGGTTTTTTGTTTTGGTCATCCGAATGTTGACATGCTTTTGGATCGGTAT
CTGACTCGAAATTTGTCGCCGCCGAAGCCGGCCGAGAATTTTGTTCCTGTAACGGAGTTTAATCGCGATTTCGCCGATTTAGTGTCTAAGTTTGAAGTGGCGAAG
AAGCGAGCAGAAGAATTAACTCACGTGTCGGAGAAATCGAGAAATAACGGCGAATTTTGGCGGGAGGAGGCGATAGAAAGGATGAGATTAGAGGAATGGAAGGAG
TTCCGATTGTCATTCATGGATTCGAGAGCTAAAGTGGCAAAGAAAGTCGAGAAAATGATCCGAGGGCCTCTGTTGCCATCGTCGTTTCACCTAGCCAAGAACCAC
CACGTCGCGACAAGGTTAGGGTTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGCTTTGCGGAGCAGAGGTTGCCAGCATTGCCTTCTCTCCAAACGATAAGGTTTTTTGTTTTGGTCATCCGAATGTTGACATGCTTTTGGATCGGTAT
CTGACTCGAAATTTGTCGCCGCCGAAGCCGGCCGAGAATTTTGTTCCTGTAACGGAGTTTAATCGCGATTTCGCCGATTTAGTGTCTAAGTTTGAAGTGGCGAAG
AAGCGAGCAGAAGAATTAACTCACGTGTCGGAGAAATCGAGAAATAACGGCGAATTTTGGCGGGAGGAGGCGATAGAAAGGATGAGATTAGAGGAATGGAAGGAG
TTCCGATTGTCATTCATGGATTCGAGAGCTAAAGTGGCAAAGAAAGTCGAGAAAATGATCCGAGGGCCTCTGTTGCCATCGTCGTTTCACCTAGCCAAGAACCAC
CACGTCGCGACAAGGTTAGGGTTTTTCTAG
Protein sequenceShow/hide protein sequence
MAVLCGAEVASIAFSPNDKVFCFGHPNVDMLLDRYLTRNLSPPKPAENFVPVTEFNRDFADLVSKFEVAKKRAEELTHVSEKSRNNGEFWREEAIERMRLEEWKE
FRLSFMDSRAKVAKKVEKMIRGPLLPSSFHLAKNHHVATRLGFF