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CmaCh17G005140 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh17G005140
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionFiber protein fb11
Genome locationCma_Chr17:3478736..3484130
RNA-Seq ExpressionCmaCh17G005140
SyntenyCmaCh17G005140
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013814.1 hypothetical protein SDJN02_23983 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2096.49Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDVSG
        MPVMEKLKMFVVQEPVVVASCLIGG+GLFLPAVVRPILDSYEASKQAPQPVLSDV G
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDVSG

XP_022958795.1 uncharacterized protein LOC111459960 [Cucurbita moschata]2.0e-1998.18Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVVVASCLIGG+GLFLPAVVRPILDSYEASKQAPQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV

XP_023006679.1 uncharacterized protein LOC111499335 [Cucurbita maxima]1.5e-19100Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV

XP_038875382.1 uncharacterized protein At4g00950-like [Benincasa hispida]7.2e-2256.49Show/hide
Query:  SPNLELPPRLLLIDKVARSEYCSSFRMMG-SCLRHDEKSCL-------------RGLNLRGKKEE---------------------ERRRFRRNIGRFSR
        SP+LELPPRLLLIDKV RSE CSSFRMMG S    DEKS L             RGLNLRGK+E+                     E  R RRN G FS 
Subjt:  SPNLELPPRLLLIDKVARSEYCSSFRMMG-SCLRHDEKSCL-------------RGLNLRGKKEE---------------------ERRRFRRNIGRFSR

Query:  LMSTPIRPRFWESVCEGLKHVVPSLRSKRFE
        LMST IRP FWESVCEGLKH+VPS RSKR +
Subjt:  LMSTPIRPRFWESVCEGLKHVVPSLRSKRFE

XP_038875998.1 uncharacterized protein LOC120068338 [Benincasa hispida]6.3e-1892.73Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASCLIGG+GLFLPA VRPILDSYEASKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV

TrEMBL top hitse value%identityAlignment
A0A068UM29 Uncharacterized protein5.2e-1890.91Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASCLIGG+GLFLPAVVRPILDS+E+SKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV

A0A6J1H4H1 uncharacterized protein LOC1114599609.5e-2098.18Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVVVASCLIGG+GLFLPAVVRPILDSYEASKQAPQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV

A0A6J1H9H3 uncharacterized protein LOC1114608334.0e-1890.91Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASC+IGG+GLFLPAVVRPILDS+EASKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV

A0A6J1L1A7 uncharacterized protein LOC1114981904.0e-1890.91Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVV ASC+IGG+GLFLPAVVRPILDS+EASKQ PQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV

A0A6J1L2U6 uncharacterized protein LOC1114993357.3e-20100Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46540.1 unknown protein3.0e-1883.64Show/hide
Query:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV
        MPVMEKL+MFV QEPVV ASCLIGGVGLFLPAVVRPILDS EASKQ   P L+DV
Subjt:  MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTGGTGGTTGCATCTTGTCTAATCGGAGGAGTTGGTCTTTTCCTTCCTGCCGTTGTAAGGCCAAT
TCTGGATTCATACGAAGCATCTAAGCAAGCTCCTCAGCCTGTATTAAGTGATGTAAGTGGTTGCGAGTATGACTGGAAAGAAATGAGGATGATTGGTATCAGTGACATAA
GAAGACCAGAATTCTTCACCTTCAACCCTACCACTGTTTTCAATCCCAATGGACTCACCAGAGCGCTCAGGGATGCTAACTCCGCCAATCTACGCCACTGTCTCGTACTG
CCACTGCCGCCCTCTCCGAACCTTGAGCTGCCTCCAAGGCTTTTGTTAATAGACAAAGTGGCAAGATCTGAGTATTGTTCTTCGTTTAGAATGATGGGATCTTGCTTGAG
ACATGATGAGAAGAGCTGTTTAAGGGGTTTGAATTTGAGAGGCAAGAAAGAAGAAGAAAGAAGAAGATTTAGAAGGAATATTGGGAGGTTTTCAAGGCTAATGAGTACTC
CTATTAGGCCTCGTTTTTGGGAAAGTGTATGTGAAGGTTTGAAGCATGTGGTTCCATCATTGAGAAGTAAAAGGTTTGAGATTCAAGATGAGTATTGA
mRNA sequenceShow/hide mRNA sequence
CTTCTCTGGTCCGGTCCATCCAAAAATCGCAAATCTTTTCACCCATAAATTTTGGACTTCGAAGAATCAAGCCACGAACGTTCAGCTCAGGAAGCGAATCAGACGAAACC
TTCAAGAAAATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCCGTGGTGGTTGCATCTTGTCTAATCGGAGGAGTTGGTCTTTTCCTTCCTGCCGTTGT
AAGGCCAATTCTGGATTCATACGAAGCATCTAAGCAAGCTCCTCAGCCTGTATTAAGTGATGTAAGTGGTTGCGAGTATGACTGGAAAGAAATGAGGATGATTGGTATCA
GTGACATAAGAAGACCAGAATTCTTCACCTTCAACCCTACCACTGTTTTCAATCCCAATGGACTCACCAGAGCGCTCAGGGATGCTAACTCCGCCAATCTACGCCACTGT
CTCGTACTGCCACTGCCGCCCTCTCCGAACCTTGAGCTGCCTCCAAGGCTTTTGTTAATAGACAAAGTGGCAAGATCTGAGTATTGTTCTTCGTTTAGAATGATGGGATC
TTGCTTGAGACATGATGAGAAGAGCTGTTTAAGGGGTTTGAATTTGAGAGGCAAGAAAGAAGAAGAAAGAAGAAGATTTAGAAGGAATATTGGGAGGTTTTCAAGGCTAA
TGAGTACTCCTATTAGGCCTCGTTTTTGGGAAAGTGTATGTGAAGGTTTGAAGCATGTGGTTCCATCATTGAGAAGTAAAAGGTTTGAGATTCAAGATGAGTATTGA
Protein sequenceShow/hide protein sequence
MPVMEKLKMFVVQEPVVVASCLIGGVGLFLPAVVRPILDSYEASKQAPQPVLSDVSGCEYDWKEMRMIGISDIRRPEFFTFNPTTVFNPNGLTRALRDANSANLRHCLVL
PLPPSPNLELPPRLLLIDKVARSEYCSSFRMMGSCLRHDEKSCLRGLNLRGKKEEERRRFRRNIGRFSRLMSTPIRPRFWESVCEGLKHVVPSLRSKRFEIQDEY