; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh17G005390 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh17G005390
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPectin lyase-like superfamily protein
Genome locationCma_Chr17:4252183..4253288
RNA-Seq ExpressionCmaCh17G005390
SyntenyCmaCh17G005390
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927478.1 exopolygalacturonase-like [Cucurbita moschata]1.3e-9176.82Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNS VKRITSLDSKNFHINVLGCNNLTFHNINI A ENSPNTDGIHIGRSN+I IT SKI T DDCISL DGSK I +TNVTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRYTNEEP EGVIVKNCT+ NT NGVRIKTWP S ASGTATNM FL+IIMVN            P++   R +  ++  S VSFKNIRGS ATP+AIKL
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICSRHLPCD+VKV +IDLTYNGIKGSI+SQCTN
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

XP_022932204.1 exopolygalacturonase-like [Cucurbita moschata]4.8e-9176.39Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNS VKRITSLDSKNFHINVLGCNNLTFHNINI A ENSPNTDGIHIGRSN+I IT SKI T DDCISL DGSK I +TNVTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRYTNEEP EGVIVKNCT+ NT NGVRIKTWP S ASGTATNM FL+IIMVN            P++   R +  ++  S VSFKNIRGS ATP+AIKL
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICSRHLPCD+VKV +IDLTYNGIKG I+SQCTN
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

XP_022933034.1 exopolygalacturonase-like [Cucurbita moschata]2.3e-9378.88Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNST+K ITSLD+KNFHINVLGCNNLTFHNINI A EN+PNTDGIHIGRSNKITITKSKI   DDCISL DGSKLIEVTNVTC  GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQP----------YSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKLI
        LGRYTNEEP EGV VKNCTL NT NGVRIKTWP S ASGTATNMHFL+IIM N            ++   R +  ++  S VSFKNIRGSSATPLAIKLI
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQP----------YSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKLI

Query:  CSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        CSRHLPCDDVKVSNIDLTYNGIKG ISSQC N
Subjt:  CSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

XP_022973892.1 exopolygalacturonase-like [Cucurbita maxima]1.1e-9278.97Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNSTVK ITSLDSKNFHINVLGCNNLTFHNINIIA +NSPNTDGIHI RSNKITITK KI   D+CISL DGSKLIEVTNVTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRYTNEEP EGV VKNCTL NT NGVRIKTWP S ASGTATNMHFL+IIMVN            P++   R +  ++    VSFKNIRGSSATPLAI+L
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICSR+LPC DVKVSNIDLTYNGIKGSISSQCTN
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

XP_023548368.1 exopolygalacturonase-like [Cucurbita pepo subsp. pepo]1.0e-9380.26Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNSTVKRITSLDSKNFHIN+L CNNLTFHNINI+A ENSPNTDGIHI RSN ITITKSKI T DDCISL DGSKLIEVTNVTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVN--------QPY---SNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRYTNEEP EGVIVKNCTL NT NGVRIKTWP S ASGTATNMHFL+IIMVN        Q Y   +   R +   +  S +SFKN+RGSSAT LAIKL
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVN--------QPY---SNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICSRHLPCDDVKVSNIDLTYNGIKG ISSQCTN
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

TrEMBL top hitse value%identityAlignment
A0A6J1EL45 exopolygalacturonase-like6.1e-9276.82Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNS VKRITSLDSKNFHINVLGCNNLTFHNINI A ENSPNTDGIHIGRSN+I IT SKI T DDCISL DGSK I +TNVTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRYTNEEP EGVIVKNCT+ NT NGVRIKTWP S ASGTATNM FL+IIMVN            P++   R +  ++  S VSFKNIRGS ATP+AIKL
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICSRHLPCD+VKV +IDLTYNGIKGSI+SQCTN
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

A0A6J1EWD3 exopolygalacturonase-like2.3e-9176.39Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNS VKRITSLDSKNFHINVLGCNNLTFHNINI A ENSPNTDGIHIGRSN+I IT SKI T DDCISL DGSK I +TNVTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRYTNEEP EGVIVKNCT+ NT NGVRIKTWP S ASGTATNM FL+IIMVN            P++   R +  ++  S VSFKNIRGS ATP+AIKL
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICSRHLPCD+VKV +IDLTYNGIKG I+SQCTN
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

A0A6J1EYL7 exopolygalacturonase-like1.1e-9378.88Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNST+K ITSLD+KNFHINVLGCNNLTFHNINI A EN+PNTDGIHIGRSNKITITKSKI   DDCISL DGSKLIEVTNVTC  GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQP----------YSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKLI
        LGRYTNEEP EGV VKNCTL NT NGVRIKTWP S ASGTATNMHFL+IIM N            ++   R +  ++  S VSFKNIRGSSATPLAIKLI
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQP----------YSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKLI

Query:  CSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        CSRHLPCDDVKVSNIDLTYNGIKG ISSQC N
Subjt:  CSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

A0A6J1EZD2 exopolygalacturonase-like3.0e-9176.39Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNS VKRITSLDSKNFHINVLGCNNLTFHNINI A ENSPNTDGIHIGRSN+I IT SKI T DDCISL DGSK I +TNVTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRYTNEEP EGVIVKNCT+ NT NGVRIK WP S ASGTATNM FL+IIMVN            P++   R +  ++  S VSFKNIRGS ATP+AIKL
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICSRHLPCD+VKV +IDLTYNGIKGSI+SQCTN
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

A0A6J1I8R8 exopolygalacturonase-like5.5e-9378.97Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        SLRFNFITNSTVK ITSLDSKNFHINVLGCNNLTFHNINIIA +NSPNTDGIHI RSNKITITK KI   D+CISL DGSKLIEVTNVTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRYTNEEP EGV VKNCTL NT NGVRIKTWP S ASGTATNMHFL+IIMVN            P++   R +  ++    VSFKNIRGSSATPLAI+L
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICSR+LPC DVKVSNIDLTYNGIKGSISSQCTN
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)1.2e-6051.93Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        +LR   +TNS ++ +T+LDSKNFH+NV+GC NLTF    I A E S NTDGIHIGRS+ + I  ++I T DDCISL DGSK I +TN+TCG GHGIS+ S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQ---PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRY NEE   G+ VKNCT+T + NGVRIKTWP S   G A+ MHF +I        I+++Q   PY+     +   +  S +SFKNI+G+S T  A+KL
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQ---PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        +CS+  PC+ V++++IDLTY+G  G  +S C N
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

Q05967 Polygalacturonase8.9e-5647.54Show/hide
Query:  KQLGKRMMATNSLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVT
        KQ  K     N+L FN +TNST+K IT+LDSK+FH+NV  C NLTF   N+ A  NSPNTDGIH+ RS+ + IT S  +T DDCIS+ D ++ + +T VT
Subjt:  KQLGKRMMATNSLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVT

Query:  CGRGHGISIKSLGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIR
        CG GHGIS+ SLG   +E+P  GV V+NCT TNT NGVRIKTWP S   G   ++HF +II+ N            P++   + L  ++  S VSF+NI+
Subjt:  CGRGHGISIKSLGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIR

Query:  GSSATPLAIKLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        G+S T  A+ L+ S+ +PC+ ++V +ID+TY+G +G   S C N
Subjt:  GSSATPLAIKLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

Q39766 Polygalacturonase2.9e-5447.21Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        ++RF+F+TN+ ++ ITS DSK FHINV  C N+T   + I A + SPNTDGIH+G+S  + I  S I T DDCIS+ DG+K + +  +TCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LG++ NEEP EG+ + NCT+TNT+NG RIKTWP     G  + +HF +I M N            P++   +    ++  S +SFKNIRG+SA P AIK 
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICS   PC +V++++ID+ +NG + + +SQC N
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

Q39786 Polygalacturonase3.7e-5447.21Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        ++RF+F+TN+ ++ ITS DSK FHINV  C N+T   + I A + SPNTDGIH+G+S  + I  S I T DDCIS+ DG+K + +  +TCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LG++ NEEP EG+ + NCT+TNT+NG RIKTWP     G  + +HF +I M N            P++   +    ++  S +SFKNIRG+SA P AIK 
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        ICS   PC +V++++ID+ +NG + + +SQC N
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

Q40312 Polygalacturonase5.8e-5546.96Show/hide
Query:  FNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKSLGR
        FNF+ NS V+ +TS DSKNFH+ V GC N+TF    I A  +SPNTDGIH+G+S  + I  + I T DDC+S+ DGSK I V  V CG GHG+S+ SLG+
Subjt:  FNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKSLGR

Query:  YTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVN-----------QPYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKLICS
        +T EE  EG+ VKNCTLT T NGVRIKTWP +  + T +++HF +I M N            P++   +    ++  S +SFKN++G+S T   + LICS
Subjt:  YTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVN-----------QPYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKLICS

Query:  RHLPCDDVKVSNIDLTYNGIKGSISSQCTN
          +PCD V+++N+DL +NG     +++CTN
Subjt:  RHLPCDDVKVSNIDLTYNGIKGSISSQCTN

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein3.6e-6049.36Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        S+RF+FI NS ++ I+S+D+KNFHINVLG  N+T +NI I+A E+SPNTDGIH+GRS+ + I  S I+T DDCIS+ DG K + V  VTCG GHGIS+ S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQPY-----SNRPRVLSVELVQSAVSFKNIRGSSATPLAI
        LGRY +E+   G+ V NCTL  T NG+RIKTWP++  S TA+++HF +I        I+++Q Y      N+ +  +++LV   +SFKNIRG+S    A+
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQPY-----SNRPRVLSVELVQSAVSFKNIRGSSATPLAI

Query:  KLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        KL+CS+  PC +V++ +ID+ YNG  G  +  C+N
Subjt:  KLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

AT3G07830.1 Pectin lyase-like superfamily protein1.7e-5746.81Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        S+RF+F+TN+ ++ I+S+D+KNFHINV+G  N+TF N+ I+A   SPNTDGIH+GRS  ++I  S+I+T DDC+S+ DG   + V NV CG GHGIS+ S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQPY-----SNRPRVLSVELVQSAVSFKNIRGSSATPLAI
        LGRY +E+   G+ V NCTL  T NG+RIKTWP++  S TA+N+HF NI        I+++Q Y      N+ +  S++L    +SF+ IRG+S    A+
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQPY-----SNRPRVLSVELVQSAVSFKNIRGSSATPLAI

Query:  KLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        KL+CS+  PC++V+V +I++ Y G  G  +  C+N
Subjt:  KLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

AT3G07840.1 Pectin lyase-like superfamily protein4.0e-5948.51Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        S+RF+F+ N+ ++ I+S+D+KNFHINVLG  N+TF N+ +IA   SPNTDGIH+GRS  + I  SKI T DDCIS+ DG K + V NV CG GHGIS+ S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQPY-----SNRPRVLSVELVQSAVSFKNIRGSSATPLAI
        LGRY +E+   G+ V NCTL  T NG+RIKTWP++  + TA+ +HF NI        I+++Q Y      N+ +  +++LV   +SFKNIRG+S    A+
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQPY-----SNRPRVLSVELVQSAVSFKNIRGSSATPLAI

Query:  KLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        KL+CS+  PC +V++ NI+L Y G  G  +  C+N
Subjt:  KLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

AT3G14040.1 Pectin lyase-like superfamily protein2.5e-5347.21Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        ++RF  +TNS +  ITS +SK FH+N+L C N+T  +I I A   S NTDGIHIGRSN + +  +KI T DDC+S+ DG++ + V NV CG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL
        LGRY NE+P +GV V+ C + NT NGVRIKTWP S   G A+N+ F +I M N            PY +    +  ++  S V+ KNI+G+SAT +A+KL
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQ-----------PYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKL

Query:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        +CS+ +PC ++ +S+I+L +NG +G   S C+N
Subjt:  ICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN

AT5G48140.1 Pectin lyase-like superfamily protein2.8e-5747.23Show/hide
Query:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS
        S+RF+F+T++ ++ ITSLD+K+FHINV+G  N+TF ++ IIA   SPNTDGIH+GRS+ I I  S I+T DDC+S+ DG K + V  VTCG GHGISI S
Subjt:  SLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTCGRGHGISIKS

Query:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQPY-----SNRPRVLSVELVQSAVSFKNIRGSSATPLAI
        LGRY++EE   G+ + NCTL  T NG+RIKTWP++  + TA+++HF NI        I+++Q Y      N+ +  +++L    +SFK IRG+S    A+
Subjt:  LGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNI--------IMVNQPY-----SNRPRVLSVELVQSAVSFKNIRGSSATPLAI

Query:  KLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN
        KL+CS+  PC +V+V ++++ Y G  G  + QC+N
Subjt:  KLICSRHLPCDDVKVSNIDLTYNGIKGSISSQCTN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAAGGAGTTTCTGATGACCAAGGAAAAGCAGCTTGGAAAAAGAATGATGGCCACAAACAGTTTGAGGTTCAACTTCATCACCAATTCAACCGTTAAGAGAATAACGTC
ACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAATAGCACTAGAAAACAGTCCCAACACTGATGGAATACACA
TCGGTCGATCAAATAAGATCACAATCACAAAGTCCAAAATTACAACCAGAGATGATTGCATTTCTCTTAGAGATGGAAGCAAACTAATTGAAGTCACTAACGTGACGTGC
GGGCGAGGACATGGTATAAGCATCAAAAGTCTTGGAAGATACACTAACGAAGAACCTGCTGAAGGTGTCATCGTAAAGAACTGCACGTTAACTAACACCGCTAATGGTGT
CAGGATCAAAACGTGGCCAACTTCTACTGCTAGCGGCACCGCCACCAATATGCACTTTTTGAACATTATAATGGTCAATCAACCCTATTCTAATAGACCAAGAGTATTGT
CCGTGGAATTAGTGCAATCGGCAGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCACTGGCAATCAAACTTATTTGCAGCCGTCACTTACCATGTGACGATGTA
AAAGTAAGCAACATTGACCTCACTTACAATGGAATAAAAGGTTCTATTTCCTCCCAATGCACGAAT
mRNA sequenceShow/hide mRNA sequence
GTGAAGGAGTTTCTGATGACCAAGGAAAAGCAGCTTGGAAAAAGAATGATGGCCACAAACAGTTTGAGGTTCAACTTCATCACCAATTCAACCGTTAAGAGAATAACGTC
ACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAATAGCACTAGAAAACAGTCCCAACACTGATGGAATACACA
TCGGTCGATCAAATAAGATCACAATCACAAAGTCCAAAATTACAACCAGAGATGATTGCATTTCTCTTAGAGATGGAAGCAAACTAATTGAAGTCACTAACGTGACGTGC
GGGCGAGGACATGGTATAAGCATCAAAAGTCTTGGAAGATACACTAACGAAGAACCTGCTGAAGGTGTCATCGTAAAGAACTGCACGTTAACTAACACCGCTAATGGTGT
CAGGATCAAAACGTGGCCAACTTCTACTGCTAGCGGCACCGCCACCAATATGCACTTTTTGAACATTATAATGGTCAATCAACCCTATTCTAATAGACCAAGAGTATTGT
CCGTGGAATTAGTGCAATCGGCAGTGAGCTTCAAGAACATTAGAGGAAGTTCTGCAACTCCACTGGCAATCAAACTTATTTGCAGCCGTCACTTACCATGTGACGATGTA
AAAGTAAGCAACATTGACCTCACTTACAATGGAATAAAAGGTTCTATTTCCTCCCAATGCACGAAT
Protein sequenceShow/hide protein sequence
VKEFLMTKEKQLGKRMMATNSLRFNFITNSTVKRITSLDSKNFHINVLGCNNLTFHNINIIALENSPNTDGIHIGRSNKITITKSKITTRDDCISLRDGSKLIEVTNVTC
GRGHGISIKSLGRYTNEEPAEGVIVKNCTLTNTANGVRIKTWPTSTASGTATNMHFLNIIMVNQPYSNRPRVLSVELVQSAVSFKNIRGSSATPLAIKLICSRHLPCDDV
KVSNIDLTYNGIKGSISSQCTN