; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh17G009190 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh17G009190
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein UPSTREAM OF FLC-like
Genome locationCma_Chr17:6924170..6925242
RNA-Seq ExpressionCmaCh17G009190
SyntenyCmaCh17G009190
Gene Ontology termsGO:0051258 - protein polymerization (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR010369 - Protein SOSEKI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575652.1 hypothetical protein SDJN03_26291, partial [Cucurbita argyrosperma subsp. sororia]5.8e-8093.37Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITCR VDANDAVLINNLSP+ASPNP P EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKS DDSRKKRQKES GRK AA P Y
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

KAG7014201.1 hypothetical protein SDJN02_24376, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-7389.16Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITCR VDANDAVLINNLSP+ASPNP P EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKS DDSRKKRQKES GRK AA P Y
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CS       PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

XP_022953921.1 uncharacterized protein LOC111456325 [Cucurbita moschata]3.2e-7892.17Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITCR VDANDAVLINNLSP+ASPNP   EKS NAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKS DDSRKKRQKES GRK AA P Y
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

XP_022991936.1 uncharacterized protein LOC111488428 [Cucurbita maxima]3.2e-86100Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

XP_023548453.1 uncharacterized protein LOC111807110 [Cucurbita pepo subsp. pepo]1.3e-7690.36Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITCR VDANDAVLINNLSP+ASPNP P EKSINAAVFCRDD+FG SARVPRNSWDGNLQIRRHYSHPSFRKS D SRKKRQKES  RK A  PTY
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSS STTTPTSDKDSASTYLLTH
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

TrEMBL top hitse value%identityAlignment
A0A6J1CV58 protein UPSTREAM OF FLC isoform X12.8e-4365.81Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKV-AATPT
        +LRQWITC  VD ND VLI N S    P P+  EK  N AV CRDD  GGSARV R+SWDG L I RH +  + RKS D+ RKKR KES GRKV AAT  
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKV-AATPT

Query:  YKPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTS
        +K + GP+CS CGK+F+PEKMH+HMKSCRGL+SL KT STSNKTTSSKSTTT TS
Subjt:  YKPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTS

A0A6J1GPF9 uncharacterized protein LOC1114563251.6e-7892.17Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITCR VDANDAVLINNLSP+ASPNP   EKS NAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKS DDSRKKRQKES GRK AA P Y
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

A0A6J1H7K3 protein UPSTREAM OF FLC-like2.2e-4866.87Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITC  +D +D+VLI N SP+ S      EK  N AVFCRDDE GGSARV RNSWDGNL++   +S  + RKSLDDSRKKRQKES G KVA   T+
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CSLCGK+F+PEKMHSHMKSC+GL+SLTKTA+TS   T SKSTT  +SDK+  STYLLT+
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

A0A6J1JS66 uncharacterized protein LOC1114884281.5e-86100Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

A0A6J1KVT1 protein UPSTREAM OF FLC-like2.5e-4462.65Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY
        MLRQWITC  +D +D++LI N SP+ S     S+K  N  VFCRD+E GGSARV RNSWDGNL++ R +S  + RK+LDDSRKKRQKES   KVA   T+
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTY

Query:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CSLCGK+F+PEKMHSHMKSC+GL+SLTKT +TS   T SKST   +SDK+  ST LLT+
Subjt:  KPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

SwissProt top hitse value%identityAlignment
Q9SYJ8 Protein SOSEKI 13.1e-0732.7Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSH---PSFRKSLDDSRKKRQKESSGRKVAAT
        +LR  + C  +D NDAVL+            P  KS       R   FG        +W+   + + H  H    SF  +    + K   E    KVA +
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSH---PSFRKSLDDSRKKRQKESSGRKVAAT

Query:  PTYKPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDK
           KP   P CS CGK F+PEKMHSHMK CRG+    K +S +N   +S +T  P   +
Subjt:  PTYKPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDK

Arabidopsis top hitse value%identityAlignment
AT1G05577.1 Domain of unknown function (DUF966)2.2e-0832.7Show/hide
Query:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSH---PSFRKSLDDSRKKRQKESSGRKVAAT
        +LR  + C  +D NDAVL+            P  KS       R   FG        +W+   + + H  H    SF  +    + K   E    KVA +
Subjt:  MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSH---PSFRKSLDDSRKKRQKESSGRKVAAT

Query:  PTYKPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDK
           KP   P CS CGK F+PEKMHSHMK CRG+    K +S +N   +S +T  P   +
Subjt:  PTYKPIAGPSCSLCGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGCCAGTGGATCACGTGCAGGGAAGTAGATGCAAACGACGCTGTTTTGATCAACAATCTATCTCCAAGAGCTTCACCGAATCCCCACCCATCGGAAAAATCCAT
AAACGCCGCCGTGTTTTGCAGAGACGACGAGTTTGGTGGCTCCGCCCGAGTTCCTCGAAATTCTTGGGATGGGAACCTCCAAATCCGACGCCATTACAGCCACCCAAGTT
TTCGGAAAAGCTTGGACGATTCAAGGAAGAAGAGGCAGAAGGAGAGCAGTGGCAGAAAGGTGGCAGCCACCCCAACTTACAAGCCAATAGCAGGACCGAGCTGCTCGTTA
TGTGGGAAGACTTTCAGGCCGGAGAAGATGCATTCACACATGAAATCGTGTAGAGGACTCAGGTCTCTGACCAAGACTGCTTCAACGTCCAACAAAACGACATCGTCTAA
GTCAACCACGACACCAACTTCCGACAAGGATTCGGCTTCCACCTACTTGTTGACCCACTGA
mRNA sequenceShow/hide mRNA sequence
AAGAGCTACTCAAGCGGAGCTTCCACTTCCAACATGCTTCGCCAGTGGATCACGTGCAGGGAAGTAGATGCAAACGACGCTGTTTTGATCAACAATCTATCTCCAAGAGC
TTCACCGAATCCCCACCCATCGGAAAAATCCATAAACGCCGCCGTGTTTTGCAGAGACGACGAGTTTGGTGGCTCCGCCCGAGTTCCTCGAAATTCTTGGGATGGGAACC
TCCAAATCCGACGCCATTACAGCCACCCAAGTTTTCGGAAAAGCTTGGACGATTCAAGGAAGAAGAGGCAGAAGGAGAGCAGTGGCAGAAAGGTGGCAGCCACCCCAACT
TACAAGCCAATAGCAGGACCGAGCTGCTCGTTATGTGGGAAGACTTTCAGGCCGGAGAAGATGCATTCACACATGAAATCGTGTAGAGGACTCAGGTCTCTGACCAAGAC
TGCTTCAACGTCCAACAAAACGACATCGTCTAAGTCAACCACGACACCAACTTCCGACAAGGATTCGGCTTCCACCTACTTGTTGACCCACTGAGAATCTCATGGTGTTA
GCTACAAACAATATTGTACTATTTGAAGGGATGTTTGTGTGGAAGAATTTGCCATATAAAAAATGAGCTGAAATAAAGCTTATTTTATTGAATTA
Protein sequenceShow/hide protein sequence
MLRQWITCREVDANDAVLINNLSPRASPNPHPSEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSLDDSRKKRQKESSGRKVAATPTYKPIAGPSCSL
CGKTFRPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH