CuGenDBv2

Gene ID	CmaCh17G010860
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	outer envelope pore protein 16-4, chloroplastic
Genome location	Cma_Chr17:7683811..7686475
RNA-Seq Expression	CmaCh17G010860
Synteny	CmaCh17G010860
Gene Ontology terms	GO:0045039 - protein insertion into mitochondrial inner membrane (biological process) GO:0055085 - transmembrane transport (biological process) GO:0009527 - plastid outer membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component) GO:0008320 - protein transmembrane transporter activity (molecular function) GO:0030943 - mitochondrion targeting sequence binding (molecular function) GO:0042803 - protein homodimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022991252.1 uncharacterized protein LOC111487964 isoform X1 [Cucurbita maxima]

5.2e-46

73.24

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV                                  
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------

Query:  -AKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYRRKNDWLN
         AKSVGIYGFQC VAKDIDCSATFTLTHCGIQRYRRKNDW++
Subjt:  -AKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYRRKNDWLN

XP_022991253.1 uncharacterized protein LOC111487964 isoform X2 [Cucurbita maxima]

2.1e-47

73.76

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV                                  
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------

Query:  -AKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLN
         AKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDW++
Subjt:  -AKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLN

XP_022991254.1 uncharacterized protein LOC111487964 isoform X3 [Cucurbita maxima]

6.6e-57

76.92

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV                                  
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------

Query:  -AKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICGCGRRSCNCY
         AKSVGIYGFQC VAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICGCGRRSCNCY
Subjt:  -AKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICGCGRRSCNCY

XP_022991256.1 uncharacterized protein LOC111487964 isoform X5 [Cucurbita maxima]

2.4e-51

97.2

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYR
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQC VAKDIDCSATFTLTHCGIQRYR
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYR

Query:  RKNDWLN
        RKNDW++
Subjt:  RKNDWLN

XP_022991257.1 uncharacterized protein LOC111487964 isoform X6 [Cucurbita maxima]

9.8e-53

98.11

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRR
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRR
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRR

Query:  KNDWLN
        KNDW++
Subjt:  KNDWLN

TrEMBL top hits

e value

%identity

Alignment

A0A6J1JL98 uncharacterized protein LOC111487964 isoform X1

2.5e-46

73.24

Show/hide

Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV                                  
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------

Query:  -AKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYRRKNDWLN
         AKSVGIYGFQC VAKDIDCSATFTLTHCGIQRYRRKNDW++
Subjt:  -AKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYRRKNDWLN

A0A6J1JLA3 uncharacterized protein LOC111487964 isoform X6

4.7e-53

98.11

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRR
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRR
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRR

Query:  KNDWLN
        KNDW++
Subjt:  KNDWLN

A0A6J1JQ87 uncharacterized protein LOC111487964 isoform X5

1.2e-51

97.2

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYR
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQC VAKDIDCSATFTLTHCGIQRYR
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYR

Query:  RKNDWLN
        RKNDW++
Subjt:  RKNDWLN

A0A6J1JUB3 uncharacterized protein LOC111487964 isoform X3

3.2e-57

76.92

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV                                  
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------

Query:  -AKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICGCGRRSCNCY
         AKSVGIYGFQC VAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICGCGRRSCNCY
Subjt:  -AKSVGIYGFQC-VAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICGCGRRSCNCY

A0A6J1JVP6 uncharacterized protein LOC111487964 isoform X2

1.0e-47

73.76

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Query:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------
        METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV                                  
Subjt:  METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFV----------------------------------

Query:  -AKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLN
         AKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDW++
Subjt:  -AKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLN

SwissProt top hits

e value

%identity

Alignment

Q9LZH8 Outer envelope pore protein 16-4, chloroplastic

1.5e-11

58.93

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Query:  GLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICG
        GLSGV  A FVAKS+G +GFQC       S  FT+THCG+QRYR KNDW+N  + G
Subjt:  GLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICG

Arabidopsis top hits

e value

%identity

Alignment

AT3G62880.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

1.1e-12

58.93

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Query:  GLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICG
        GLSGV  A FVAKS+G +GFQC       S  FT+THCG+QRYR KNDW+N  + G
Subjt:  GLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICG

AT3G62880.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein

1.1e-12

58.93

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Query:  GLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICG
        GLSGV  A FVAKS+G +GFQC       S  FT+THCG+QRYR KNDW+N  + G
Subjt:  GLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWLNGSICG

Sequences

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CDS sequence

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ATGGAAACGAGCTCAACGGCGTCGTTCCATGTTCTTCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGCTTGTGTATGGACCCTT
TATTCCTTTGATTCTTCTTTGCAATTTCTCTTCTTCATTTCTTTCTTTTTCTCTCTTACAGGCCTCAGTGGCGTCGACCATGCTGTTTTCGTGGCGAAATCTGTT
GGAATATACGGCTTTCAATGTGTAGCTAAAGATATAGATTGTTCTGCAACTTTTACTCTGACTCACTGTGGCATTCAAAGATATAGAAGGAAGAATGATTGGCTA
AATGGATCGATTTGCGGGTGCGGTCGGAGGAGCTGCAATTGCTACTAG

mRNA sequence

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TCTGCATACGACTCCCGATGGAACTTGAGAATTGAAAGATGGAAACGAGCTCAACGGCGTCGTTCCATGTTCTTCCCTCGCCGTCGAATCCACCATTCGCGTCGG
AACGGCCGGCGCTCTATGGGGCTTGTGTATGGACCCTTTATTCCTTTGATTCTTCTTTGCAATTTCTCTTCTTCATTTCTTTCTTTTTCTCTCTTACAGGCCTCA
GTGGCGTCGACCATGCTGTTTTCGTGGCGAAATCTGTTGGAATATACGGCTTTCAATGTGTAGCTAAAGATATAGATTGTTCTGCAACTTTTACTCTGACTCACT
GTGGCATTCAAAGATATAGAAGGAAGAATGATTGGCTAAATGGATCGATTTGCGGGTGCGGTCGGAGGAGCTGCAATTGCTACTAGGACTAGAAGAAGTTGGTCG
CAGGTTGTTGTGATGCCTGCCCTTGTGTCTGCCTTCAGTGCTGCAGCTGAATATTCAAGATCACTTTAGAATACCTCTTGTGGGAAGAACAAAACCATGAGGTAT
TCACCATTCAATCCATTTCCATTGCTTGTGAATGATATGCCGCATGCCCAAAATTCAGCAAATGTTGGTCCTATATCGGTTGAAGGAGGGACCGGAACCTCATCA
TGTCGATTCCACTCAATTCTTCACAATTGCAGCTAGCTTCTGGTGAGTTAAAAGCTGTAAATGATGGAAAAGCCGTGTAACAGCTTTCTCGTGCTTACAATATCT
TGCATGATTGAGGATATTTTACCTTCCATTACCGTTTACTATATGCATCATATTTAATTTTTATTATAGACAAATATCTTGTATAGCCTTCCATTATGATTTACA
CAAGAGGGATCACGACTTTCTTATTTATAAAAAAGTAGATGGAGGAACCAAATTGCAACC

Protein sequence

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METSSTASFHVLPSPSNPPFASERPALYGACVWTLYSFDSSLQFLFFISFFFSLTGLSGVDHAVFVAKSVGIYGFQCVAKDIDCSATFTLTHCGIQRYRRKNDWL
NGSICGCGRRSCNCY

CmaCh17G010860 (gene) of Cucurbita maxima (Rimu) v1.1 genome