; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh17G010880 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh17G010880
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionserine/arginine-rich-splicing factor SR34-like
Genome locationCma_Chr17:7688794..7691689
RNA-Seq ExpressionCmaCh17G010880
SyntenyCmaCh17G010880
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575826.1 Serine/arginine-rich-splicing factor SR34, partial [Cucurbita argyrosperma subsp. sororia]7.1e-15099.65Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGICFLHPSIIGQNVRLGQIDNINVLKVN
        RSYSRGRSYSRS SRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGICFLHPSIIGQNVRLGQIDNINVLKVN
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGICFLHPSIIGQNVRLGQIDNINVLKVN

KAG7014363.1 Serine/arginine-rich-splicing factor SR34, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-13399.62Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRS SRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

XP_016901086.1 PREDICTED: serine/arginine-rich-splicing factor SR34-like isoform X3 [Cucumis melo]6.4e-14394.77Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHG SR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSD+RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+YVRVREYDSKRD S+SPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGICFLHPSIIGQNVRLGQIDNINVLKVN
        RSYSRGRSYSRS SRGRSRSKS SRSKSPK KSSQRSPVKSRSRSASPARSRSKSSSLSG+C LHPS IGQNVRLG+I+N  VLKVN
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGICFLHPSIIGQNVRLGQIDNINVLKVN

XP_022148221.1 serine/arginine-rich-splicing factor SR34-like isoform X3 [Momordica charantia]7.1e-14294.79Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHG SR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSD+RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRD S+SPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG-ICFLHPSIIGQNVRLGQIDNINVLKVN
        RS+SRGRSYSRS SRGRSRSKSRSRSKSPK KSSQRSPVKSRSRSASPARSRSKSSSLSG +C LHPS IGQNVRLG+I++I VLKVN
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG-ICFLHPSIIGQNVRLGQIDNINVLKVN

XP_022991236.1 serine/arginine-rich-splicing factor SR34-like [Cucurbita maxima]1.4e-134100Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

TrEMBL top hitse value%identityAlignment
A0A1S4DYM7 serine/arginine-rich-splicing factor SR34-like isoform X33.1e-14394.77Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHG SR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSD+RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSR+YVRVREYDSKRD S+SPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGICFLHPSIIGQNVRLGQIDNINVLKVN
        RSYSRGRSYSRS SRGRSRSKS SRSKSPK KSSQRSPVKSRSRSASPARSRSKSSSLSG+C LHPS IGQNVRLG+I+N  VLKVN
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGICFLHPSIIGQNVRLGQIDNINVLKVN

A0A6J1D4Q8 serine/arginine-rich-splicing factor SR34-like isoform X33.4e-14294.79Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHG SR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSD+RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRD S+SPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG-ICFLHPSIIGQNVRLGQIDNINVLKVN
        RS+SRGRSYSRS SRGRSRSKSRSRSKSPK KSSQRSPVKSRSRSASPARSRSKSSSLSG +C LHPS IGQNVRLG+I++I VLKVN
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG-ICFLHPSIIGQNVRLGQIDNINVLKVN

A0A6J1GP36 serine/arginine-rich-splicing factor SR34-like isoform X12.9e-13399.23Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAI GRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRS SRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

A0A6J1GQG9 serine/arginine-rich-splicing factor SR34-like isoform X22.9e-13399.23Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAI GRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRS SRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

A0A6J1JQ69 serine/arginine-rich-splicing factor SR34-like6.9e-135100Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
        GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
        RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG
Subjt:  RSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSG

SwissProt top hitse value%identityAlignment
A2RVS6 Serine/arginine-rich splicing factor SR34A7.8e-8364.44Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR--YSSHGS
        MS R SR++YVGNLPGDIRE E+ED+FYKYGRI  I+LKVPPRPP Y FVEFE + DA+DAI+GRDGY+ DG RLRVELAHGGRG SSS  R  Y   GS
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR--YSSHGS

Query:  SRGGR---------GVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDS
          GG          GVSR S+FRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD  GT G+VDYTNYDDMKYAI+KLDD+EFRN ++R ++RV++Y+S
Subjt:  SRGGR---------GVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDS

Query:  KRDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS
         R  S+SPSR RS SR RS SR   R  SRS+S SRSKSP+ K   +SP +S SRS S +RS S     S
Subjt:  KRDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS

F4JHI7 Serine/arginine-rich splicing factor SR34B9.8e-9473.23Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRT+YVGNLPGDIRE+EVEDLF KYG +  IDLK+PPRPPGYAFVEFEDA DA DAI GRDGYDFDGH LRVELAHGGR  SS   R S  G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG----------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSK
        GG          RG SRRS++RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMKYA   LDD+EFRNAFS  YVRVREYDS+
Subjt:  GG----------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSK

Query:  RDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS
        RD S+SPSRGRSYS+ RS  RS SR RSRS+SRS+S+SPK KS +RSP KS SRS   +RSRSKS SLS
Subjt:  RDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS

O22315 Serine/arginine-rich-splicing factor SR341.1e-9773.09Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+DAI GRDGYDFDGHRLRVELAHGGR  SS   R S +G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR
        GG         RG SRRS+FRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+EFRNAFS  YVRVREYDS++
Subjt:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR

Query:  DSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS
        D S+SPSRGRSYS+ RS SR  S  RSRS+SRSRS+SPK KSS+RSP K         S+SRS SP RSRS+S S
Subjt:  DSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS

Q6NYA0 Serine/arginine-rich splicing factor 1B7.6e-5455.23Show/hide
Query:  VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRG-VSR
        +YVGNLP DIR K+VED+FYKYG I  IDLK     P +AFVEFED  DA+DA+ GRDGYD+DG+RLRVE    GRG           G+ RG  G  SR
Subjt:  VYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRG-VSR

Query:  RSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFR-NAFSRSYVRVREYDSKRDSSKSPSRGRSYSRG
        RS++RV+V+GLP S SWQDLKDHMR AGDVC++ VFRDG   TG+V++   +DM YA++KLD+++FR +    +Y+RV     K D  +SPS GRS SR 
Subjt:  RSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFR-NAFSRSYVRVREYDSKRDSSKSPSRGRSYSRG

Query:  RSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRS
        RS SRS S  RSRS S  RS+     S + SP  SRSRS
Subjt:  RSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRS

Q9XFR5 Serine/arginine-rich splicing factor SR302.8e-8068.46Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR +RT+YVGNLPGDIR+ EVEDLFYKYG I  IDLK+PPRPPGYAFVEFED  DA DAI GRDGYDFDG RLRVE+AHGGR  S S DRYSS  S  
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG
          R  SRRSD+RVLVTGLP SASWQDLKDHMR+AGDVCFS+VF D  G +G+VDY+NYDDMKYAI+KLD +EFRNAFS +Y+RVREY+S R  S+SP   
Subjt:  GGRGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRG

Query:  RSYSRGRSYSRSHSRGRSRS-KSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS
        +SY      SRS SRG S S  S+SRS SP    S RS   SRSRS   + SRS+S S S
Subjt:  RSYSRGRSYSRSHSRGRSRS-KSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS

Arabidopsis top hitse value%identityAlignment
AT1G02840.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.9e-9973.09Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+DAI GRDGYDFDGHRLRVELAHGGR  SS   R S +G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR
        GG         RG SRRS+FRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+EFRNAFS  YVRVREYDS++
Subjt:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR

Query:  DSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS
        D S+SPSRGRSYS+ RS SR  S  RSRS+SRSRS+SPK KSS+RSP K         S+SRS SP RSRS+S S
Subjt:  DSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS

AT1G02840.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-9874.81Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+DAI GRDGYDFDGHRLRVELAHGGR  SS   R S +G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR
        GG         RG SRRS+FRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+EFRNAFS  YVRVREYDS++
Subjt:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR

Query:  DSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSS
        D S+SPSRGRSYS+ RS SR  S  RSRS+SRSRS+SPK KSS+RSP KS SRS  P RS+S+S S
Subjt:  DSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSS

AT1G02840.3 RNA-binding (RRM/RBD/RNP motifs) family protein7.9e-9973.09Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRTVYVGNLPGDIRE+EVEDLF KYG +  IDLKVPPRPPGYAFVEF+DA DA+DAI GRDGYDFDGHRLRVELAHGGR  SS   R S +G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR
        GG         RG SRRS+FRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD  GTTG+VDYT Y+DMKYA+KKLDD+EFRNAFS  YVRVREYDS++
Subjt:  GG---------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKR

Query:  DSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS
        D S+SPSRGRSYS+ RS SR  S  RSRS+SRSRS+SPK KSS+RSP K         S+SRS SP RSRS+S S
Subjt:  DSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVK---------SRSRSASPARSRSKSSS

AT3G49430.1 SER/ARG-rich protein 34A5.5e-8464.44Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR--YSSHGS
        MS R SR++YVGNLPGDIRE E+ED+FYKYGRI  I+LKVPPRPP Y FVEFE + DA+DAI+GRDGY+ DG RLRVELAHGGRG SSS  R  Y   GS
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDR--YSSHGS

Query:  SRGGR---------GVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDS
          GG          GVSR S+FRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD  GT G+VDYTNYDDMKYAI+KLDD+EFRN ++R ++RV++Y+S
Subjt:  SRGGR---------GVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDS

Query:  KRDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS
         R  S+SPSR RS SR RS SR   R  SRS+S SRSKSP+ K   +SP +S SRS S +RS S     S
Subjt:  KRDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS

AT4G02430.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-9573.23Show/hide
Query:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR
        MSSR+SRT+YVGNLPGDIRE+EVEDLF KYG +  IDLK+PPRPPGYAFVEFEDA DA DAI GRDGYDFDGH LRVELAHGGR  SS   R S  G  R
Subjt:  MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSR

Query:  GG----------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSK
        GG          RG SRRS++RV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRDG GTTGIVDYT+Y+DMKYA   LDD+EFRNAFS  YVRVREYDS+
Subjt:  GG----------RGVSRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSK

Query:  RDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS
        RD S+SPSRGRSYS+ RS  RS SR RSRS+SRS+S+SPK KS +RSP KS SRS   +RSRSKS SLS
Subjt:  RDSSKSPSRGRSYSRGRSYSRSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCCGTGCCAGCAGAACAGTCTATGTTGGCAATCTCCCGGGTGATATTCGTGAGAAAGAAGTGGAAGATTTATTTTACAAGTATGGTCGCATAGCCCAC
ATTGATCTCAAGGTTCCACCGAGGCCTCCTGGTTATGCATTTGTTGAGTTCGAAGATGCGGAAGATGCTCAAGATGCAATTCGTGGTCGCGATGGCTATGATTTT
GATGGCCATAGGTTGCGCGTGGAACTTGCTCATGGTGGTCGTGGTCATTCATCGTCTAGTGATCGTTATAGTAGTCATGGAAGCAGCCGAGGTGGGCGTGGAGTA
TCTCGACGCTCTGATTTTCGTGTATTAGTCACAGGGTTACCTTCTTCTGCTTCGTGGCAAGACTTAAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCC
CAAGTGTTCCGTGATGGTAGTGGAACCACAGGGATTGTGGATTACACCAACTATGATGACATGAAGTATGCAATTAAAAAACTGGATGACTCTGAGTTCCGTAAT
GCATTTTCCCGGTCTTATGTTCGTGTGAGGGAATATGATTCAAAGAGGGATTCATCCAAGAGTCCTAGTCGTGGGCGGTCATACTCTAGAGGGCGGAGTTACAGT
CGCAGTCATAGTAGAGGTCGAAGTAGGAGCAAGAGTCGCAGTAGGAGCAAGTCTCCTAAGGGTAAATCTTCCCAGCGGTCACCTGTAAAATCCCGATCAAGGTCT
GCTTCCCCTGCTCGTTCACGATCGAAGTCATCATCTCTTTCAGGGATTTGTTTTTTGCACCCGTCTATCATTGGGCAGAATGTTAGACTGGGTCAAATAGACAAC
ATTAATGTACTGAAAGTGAACTAA
mRNA sequenceShow/hide mRNA sequence
TATTCAGTCCTCTCGTCTCTGCGCTTTGTCACCTACAGATCGGATTTGAGGGAAAATGAGCAGCCGTGCCAGCAGAACAGTCTATGTTGGCAATCTCCCGGGTGA
TATTCGTGAGAAAGAAGTGGAAGATTTATTTTACAAGTATGGTCGCATAGCCCACATTGATCTCAAGGTTCCACCGAGGCCTCCTGGTTATGCATTTGTTGAGTT
CGAAGATGCGGAAGATGCTCAAGATGCAATTCGTGGTCGCGATGGCTATGATTTTGATGGCCATAGGTTGCGCGTGGAACTTGCTCATGGTGGTCGTGGTCATTC
ATCGTCTAGTGATCGTTATAGTAGTCATGGAAGCAGCCGAGGTGGGCGTGGAGTATCTCGACGCTCTGATTTTCGTGTATTAGTCACAGGGTTACCTTCTTCTGC
TTCGTGGCAAGACTTAAAGGATCACATGCGGCGAGCTGGGGATGTTTGTTTCTCCCAAGTGTTCCGTGATGGTAGTGGAACCACAGGGATTGTGGATTACACCAA
CTATGATGACATGAAGTATGCAATTAAAAAACTGGATGACTCTGAGTTCCGTAATGCATTTTCCCGGTCTTATGTTCGTGTGAGGGAATATGATTCAAAGAGGGA
TTCATCCAAGAGTCCTAGTCGTGGGCGGTCATACTCTAGAGGGCGGAGTTACAGTCGCAGTCATAGTAGAGGTCGAAGTAGGAGCAAGAGTCGCAGTAGGAGCAA
GTCTCCTAAGGGTAAATCTTCCCAGCGGTCACCTGTAAAATCCCGATCAAGGTCTGCTTCCCCTGCTCGTTCACGATCGAAGTCATCATCTCTTTCAGGGATTTG
TTTTTTGCACCCGTCTATCATTGGGCAGAATGTTAGACTGGGTCAAATAGACAACATTAATGTACTGAAAGTGAACTAA
Protein sequenceShow/hide protein sequence
MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRGV
SRRSDFRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRSYVRVREYDSKRDSSKSPSRGRSYSRGRSYS
RSHSRGRSRSKSRSRSKSPKGKSSQRSPVKSRSRSASPARSRSKSSSLSGICFLHPSIIGQNVRLGQIDNINVLKVN