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CmaCh17G013690 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh17G013690
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr17:9160660..9162072
RNA-Seq ExpressionCmaCh17G013690
SyntenyCmaCh17G013690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACR33875.1 unknown [Zea mays]1.1e-3364.22Show/hide
Query:  DELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFGQPHVRHRLFV
        DEL+A+G GV LHE+HE VPL R  HHVLGLD RR +++ELG H+HGL H  ++ HV++ +V  L RRVEHRR LE E+GH+VGAV+G GQPHVR RL V
Subjt:  DELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFGQPHVRHRLFV

Query:  RALDELNLR
        RALDEL+ R
Subjt:  RALDELNLR

ACR35848.1 unknown [Zea mays]1.1e-3364.22Show/hide
Query:  DELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFGQPHVRHRLFV
        DEL+A+G GV LHE+HE VPL R  HHVLGLD RR +++ELG H+HGL H  ++ HV++ +V  L RRVEHRR LE E+GH+VGAV+G GQPHVR RL V
Subjt:  DELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFGQPHVRHRLFV

Query:  RALDELNLR
        RALDEL+ R
Subjt:  RALDELNLR

KAG7014595.1 hypothetical protein SDJN02_24774, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-8793.71Show/hide
Query:  ENTMRSRNRIRRFSFLDELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVG
        E TMRSRNRI RFSFLDELQ IGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIH LNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVG
Subjt:  ENTMRSRNRIRRFSFLDELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVG

Query:  AVSGFGQPHVRHRLFVRALDELNLRQNHEDRIGQPSVGFTSAASDRLAFAARDVKGTAVECGEGAAVESGGGKSC
        AVSGF QPHVRHRL VRALDEL+LRQNHEDRIG+PSVG TSAASDRLAF+ARDVKGTAVECGE AAVESGGGKSC
Subjt:  AVSGFGQPHVRHRLFVRALDELNLRQNHEDRIGQPSVGFTSAASDRLAFAARDVKGTAVECGEGAAVESGGGKSC

TrEMBL top hitse value%identityAlignment
C4IY75 Uncharacterized protein5.5e-3464.22Show/hide
Query:  DELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFGQPHVRHRLFV
        DEL+A+G GV LHE+HE VPL R  HHVLGLD RR +++ELG H+HGL H  ++ HV++ +V  L RRVEHRR LE E+GH+VGAV+G GQPHVR RL V
Subjt:  DELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFGQPHVRHRLFV

Query:  RALDELNLR
        RALDEL+ R
Subjt:  RALDELNLR

C4J3U8 Uncharacterized protein5.5e-3464.22Show/hide
Query:  DELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFGQPHVRHRLFV
        DEL+A+G GV LHE+HE VPL R  HHVLGLD RR +++ELG H+HGL H  ++ HV++ +V  L RRVEHRR LE E+GH+VGAV+G GQPHVR RL V
Subjt:  DELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSGFGQPHVRHRLFV

Query:  RALDELNLR
        RALDEL+ R
Subjt:  RALDELNLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATACAATGAGAAGCAGAAACCGTATTAGGCGATTTTCATTTCTTGACGAATTGCAAGCCATTGGCGTTGGAGTATCGCTCCATGAATCTCATGAACCT
GTCCCACTCCCTCGGAGTCCGCATCACGTACTTGGCCTCGATTCCCGCAGGTTTTCCATTAATGAACTTGGCGTTCACATCCACGGACTGAATCACACCTTCCTC
ATCGATCATGTAGAATCCGGTAATGTCCCCGACCTCCCCCGACGAGTCGAACACCGACGGCTGCTCGAACTTGAAAATGGCCATTCCGTTGGTGCCGTCTCGGGA
TTTGGTCAGCCTCACGTCCGGCACCGTCTGTTCGTCCGTGCCCTGGATGAACTGAATCTTCGGCAGAACCATGAGGATCGTATTGGACAGCCGTCCGTGGGGTTT
ACATCTGCGGCGAGTGACCGTCTGGCATTTGCCGCCAGAGACGTTAAGGGAACGGCCGTGGAATGCGGAGAAGGCGCTGCTGTGGAGTCTGGCGGAGGCAAAAGC
TGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATACAATGAGAAGCAGAAACCGTATTAGGCGATTTTCATTTCTTGACGAATTGCAAGCCATTGGCGTTGGAGTATCGCTCCATGAATCTCATGAACCT
GTCCCACTCCCTCGGAGTCCGCATCACGTACTTGGCCTCGATTCCCGCAGGTTTTCCATTAATGAACTTGGCGTTCACATCCACGGACTGAATCACACCTTCCTC
ATCGATCATGTAGAATCCGGTAATGTCCCCGACCTCCCCCGACGAGTCGAACACCGACGGCTGCTCGAACTTGAAAATGGCCATTCCGTTGGTGCCGTCTCGGGA
TTTGGTCAGCCTCACGTCCGGCACCGTCTGTTCGTCCGTGCCCTGGATGAACTGAATCTTCGGCAGAACCATGAGGATCGTATTGGACAGCCGTCCGTGGGGTTT
ACATCTGCGGCGAGTGACCGTCTGGCATTTGCCGCCAGAGACGTTAAGGGAACGGCCGTGGAATGCGGAGAAGGCGCTGCTGTGGAGTCTGGCGGAGGCAAAAGC
TGCTGA
Protein sequenceShow/hide protein sequence
MENTMRSRNRIRRFSFLDELQAIGVGVSLHESHEPVPLPRSPHHVLGLDSRRFSINELGVHIHGLNHTFLIDHVESGNVPDLPRRVEHRRLLELENGHSVGAVSG
FGQPHVRHRLFVRALDELNLRQNHEDRIGQPSVGFTSAASDRLAFAARDVKGTAVECGEGAAVESGGGKSC