; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh18G000340 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh18G000340
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like
Genome locationCma_Chr18:133053..134936
RNA-Seq ExpressionCmaCh18G000340
SyntenyCmaCh18G000340
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572932.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.4e-8398.72Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKP TEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASD
        MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPAS+
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASD

XP_022136971.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Momordica charantia]1.2e-7993.04Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGR+PLSP HFFN TRPGDKYYFHKQCRNRS L MLSVAELGKGGGLLEKPT EKTTPGRESEF+VRKSRK APPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022954871.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucurbita moschata]2.0e-8599.37Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKP TEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022994956.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima]5.2e-86100Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_038894047.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Benincasa hispida]5.2e-7891.14Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGR+ LSP HFF+ST+PGDKYYFHKQCRNRS+L MLSVAELGKGGGLLEKPT EKTTPGRESEF+VRK RK +PPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

TrEMBL top hitse value%identityAlignment
A0A0A0LSY6 ClpS domain-containing protein2.8e-7790.51Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGR+PLSP  FF ST+PGDKYYFHKQCRNRS L M+SVAELGKGGGLLEKP  EKTTPGRESEF+VRKSRK +PPYRVLLHNDN NKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A1S3C561 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like7.3e-7891.14Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGR+PLSP  FF ST+PGDKYYFHKQCRNRS L M+SVAELGKGGGLLEKPT EKTTPGRESEF+VRKSRK +PPYRVLLHNDN NKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1C511 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X16.0e-8093.04Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGR+PLSP HFFN TRPGDKYYFHKQCRNRS L MLSVAELGKGGGLLEKPT EKTTPGRESEF+VRKSRK APPYRVLLHNDN+NKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMT+DNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1GS56 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic9.6e-8699.37Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKP TEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1K0P0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like2.5e-86100Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
        MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVL

Query:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  MKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.1e-2252.29Show/hide
Query:  GGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLS
        GG+++ PTT      ++    V +S+K  P Y+VLLHNDN+NKREYVV+VL+KV+  +TVD+AV  MQEAH  G+A+V+ C Q +AE +C  LR NGL S
Subjt:  GGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLS

Query:  SIEPASDGC
        +IEP   GC
Subjt:  SIEPASDGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS2.8e-1859.49Show/hide
Query:  RKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP
        RKIAP YRVLLHND+ N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL SSIEP
Subjt:  RKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.3e-1557.53Show/hide
Query:  RKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGL
        RKIAP YRVLLHND+ N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL
Subjt:  RKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGL

Q7NML9 ATP-dependent Clp protease adapter protein ClpS4.7e-1351.19Show/hide
Query:  RKS--RKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP
        RKS  RK  P Y+VLLHND+H    YV++VLMK IP M    A  IM EAH  G+AVVI+CA   AE +   L  + L S+ EP
Subjt:  RKS--RKIAPPYRVLLHNDNHNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.6e-6175.62Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHK-QCRNRSILTMLSV-AELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQ
        ME AICGRL L+P   FNS + GDK+   K  C NRSIL  LS  A LGKGGG+L+KP  EKTTPGRESEF++RKS+KIAPPYRV+LHNDN NKREYVVQ
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHK-QCRNRSILTMLSV-AELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQ

Query:  VLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMKVIPGMTVDNAVNIMQEAH NG+AVVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.1e-6275.62Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHK-QCRNRSILTMLSV-AELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQ
        ME AICGRL L+P   FNS + GDK+   K  C NRSIL  LS  A LGKGGG+L+KP  EKTTPGRESEF++RKS+KIAPPYRV+LHNDN NKREYVVQ
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHK-QCRNRSILTMLSV-AELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQ

Query:  VLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMKVIPGMTVDNAVNIMQEAH NG+AVVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.1e-4158.75Show/hide
Query:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHK-QCRNRSILTMLSV-AELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQ
        ME AICGRL L+P   FNS + GDK+   K  C NRSIL  LS  A LGKGGG+L+KP  EKTTPGRESEF++RKS+KIAPPYRV+LHNDN NKREYVVQ
Subjt:  MEAAICGRLPLSPYHFFNSTRPGDKYYFHK-QCRNRSILTMLSV-AELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQ

Query:  VLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        VLMK                               DAE HCMQLRGNGLLSS+EP   GC
Subjt:  VLMKVIPGMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTGCGATTTGCGGTCGACTGCCTCTTTCACCCTACCATTTCTTCAATTCCACCAGGCCAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGG
AGCATCTTAACGATGCTATCAGTTGCTGAGCTCGGAAAAGGAGGAGGGTTGTTAGAAAAGCCAACCACAGAGAAGACAACGCCTGGCCGCGAATCTGAGTTTAAT
GTTAGGAAATCAAGGAAAATTGCTCCACCTTACCGAGTGTTGCTACACAACGACAATCACAATAAGCGGGAATATGTTGTGCAAGTTCTGATGAAGGTGATCCCT
GGAATGACAGTTGACAATGCAGTCAACATAATGCAGGAGGCGCATTACAATGGGATGGCAGTGGTAATTATCTGCGCCCAAGTGGATGCAGAAGATCACTGCATG
CAGCTGAGAGGCAATGGTCTTCTTAGTTCAATTGAGCCTGCAAGCGATGGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
GGGTGGCCTATAATCACTACCATTCCTATGCATTTTCTTTCATTCATCCGCCATTGCAGAATTGGAATCCAAACCTCTCACCTATGGATCCAGAATTAGAAGAAT
GCATGGATGGATCTACCATTAGAAGAACGCATCAAAATCAAATATGATTTTAGTCCAATTTTACGAAAAGAAAATATAGTACGAGTATTTTTTAAAACAGAGGGG
TCTAAAAGTAAATGGAAAACAAAAGGTGAAACGGCGTCGTAAAAGGATGAATGGCTGAGACGCCAGGTTCATTATCCCCTTGAAAAGATCGCGGGAGGGTGGGCT
CGTTTAGCGAAGAGGAAACCCACGCGTCAGTAACTAAACCACTCAGTCGAAGCTCGTTTACATTTTTCTGTAAATCTGCGCCTCCAAATCACTCTTCATCCTGCA
ACAGTTCTTCAAGCAGAGCGACAGAGATTGAGAGAGGGAGAGTGGCCATGGAAGCTGCGATTTGCGGTCGACTGCCTCTTTCACCCTACCATTTCTTCAATTCCA
CCAGGCCAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGCATCTTAACGATGCTATCAGTTGCTGAGCTCGGAAAAGGAGGAGGGTTGTTAGAAA
AGCCAACCACAGAGAAGACAACGCCTGGCCGCGAATCTGAGTTTAATGTTAGGAAATCAAGGAAAATTGCTCCACCTTACCGAGTGTTGCTACACAACGACAATC
ACAATAAGCGGGAATATGTTGTGCAAGTTCTGATGAAGGTGATCCCTGGAATGACAGTTGACAATGCAGTCAACATAATGCAGGAGGCGCATTACAATGGGATGG
CAGTGGTAATTATCTGCGCCCAAGTGGATGCAGAAGATCACTGCATGCAGCTGAGAGGCAATGGTCTTCTTAGTTCAATTGAGCCTGCAAGCGATGGTTGTTGAA
TAGGGAGAATAGATTATGCAATGTACTCTCTTCTGCCCATATTAAAATATTGAATGTCATCAACTGCTACAAAATTATGTACATAAATAGAGATACTTCATAAAG
AAATAAACTTCAATTTACGAATGCATGCTTCACTATTCTCTGGTTTCAA
Protein sequenceShow/hide protein sequence
MEAAICGRLPLSPYHFFNSTRPGDKYYFHKQCRNRSILTMLSVAELGKGGGLLEKPTTEKTTPGRESEFNVRKSRKIAPPYRVLLHNDNHNKREYVVQVLMKVIP
GMTVDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC