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CmaCh18G001990 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh18G001990
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr18:1041910..1085083
RNA-Seq ExpressionCmaCh18G001990
SyntenyCmaCh18G001990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012279.1 hypothetical protein SDJN02_25031, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-3859.04Show/hide
Query:  AKRSSEPLPPAYSDASCLGPTGIIIYPSRTHTLFFRTFSHKNRSAPSTVSSLLNARCRNQTLDNYQAIGGRESRIERSLSPDPGDEKYRKAVDPVGIFES
        AKRSSEPLPPAYSDAS LGPTGIIIYPSRTHTLFFRTFSHKNRSAPS VSSLLNAR RNQTLDNYQAIGGRESRIERSLSPDPGDEKY +       F S
Subjt:  AKRSSEPLPPAYSDASCLGPTGIIIYPSRTHTLFFRTFSHKNRSAPSTVSSLLNARCRNQTLDNYQAIGGRESRIERSLSPDPGDEKYRKAVDPVGIFES

Query:  ARNTVVNCSFSCFIDLRFYLKKDVLKVMMMNDMRDILVPGSIFETDLSQGQNDGNQFVEIEDGNGG
                  +   ++  + K+  L ++  +++  IL  G +    +     DG+  VE+++ N G
Subjt:  ARNTVVNCSFSCFIDLRFYLKKDVLKVMMMNDMRDILVPGSIFETDLSQGQNDGNQFVEIEDGNGG
XP_022988780.1 uncharacterized protein LOC111486017 [Cucurbita maxima]3.4e-0457.38Show/hide
Query:  NRSAPSTVSSLLNARCRNQT-LDNYQAIGGRESRIERSLSPDPGDEKYR-KAVDPVGIFES
        N+SAPST S  L   CRNQT LD+YQ I GR+SRI RS S   GDEK R  A  PV +F +
Subjt:  NRSAPSTVSSLLNARCRNQT-LDNYQAIGGRESRIERSLSPDPGDEKYR-KAVDPVGIFES
TrEMBL top hitse value%identityAlignment
A0A6J1JKJ0 uncharacterized protein LOC1114860171.7e-0457.38Show/hide
Query:  NRSAPSTVSSLLNARCRNQT-LDNYQAIGGRESRIERSLSPDPGDEKYR-KAVDPVGIFES
        N+SAPST S  L   CRNQT LD+YQ I GR+SRI RS S   GDEK R  A  PV +F +
Subjt:  NRSAPSTVSSLLNARCRNQT-LDNYQAIGGRESRIERSLSPDPGDEKYR-KAVDPVGIFES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCAAATTAAGCAGGGAGACACGAGAGACATGAAGCAAATCATGGGAAGTGGGAAAGTTCATTCGATGGGTCCAGAAAAAGAGGCTTTGATGGGAAGAAAA
AGTAGCCATGGAAATGAAGAGATGAAAGCGATGGCTGTGGAAACAAATGGTTCTCATGAATGGAATTGCACAAGGGTTTTGTTAGATCATCAACGAGCTGTTCTT
AGAAGAGCGAAACGGTCTTCAGAGCCGTTACCCCCGGCTTATTCCGACGCCAGCTGTCTCGGCCCCACGGGGATCATTATATATCCCTCCCGAACTCACACTCTC
TTCTTCAGAACATTCTCGCACAAGAATCGGAGCGCTCCATCAACGGTCTCCTCTCTTCTGAACGCTCGTTGCCGAAATCAAACGCTAGATAATTACCAAGCAATT
GGAGGAAGAGAGAGCAGAATCGAAAGGAGTTTGTCGCCTGATCCCGGTGATGAAAAATACAGAAAAGCAGTTGATCCTGTCGGGATTTTCGAATCTGCTAGGAAT
ACTGTTGTGAATTGTAGCTTTAGCTGCTTTATTGATCTTCGGTTTTACTTGAAAAAGGATGTACTGAAAGTCATGATGATGAACGATATGAGAGACATACTAGTG
CCTGGATCAATTTTTGAGACTGATTTGAGTCAAGGGCAGAATGATGGCAATCAATTTGTTGAAATCGAAGATGGAAATGGAGGACATAGATGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCAAATTAAGCAGGGAGACACGAGAGACATGAAGCAAATCATGGGAAGTGGGAAAGTTCATTCGATGGGTCCAGAAAAAGAGGCTTTGATGGGAAGAAAA
AGTAGCCATGGAAATGAAGAGATGAAAGCGATGGCTGTGGAAACAAATGGTTCTCATGAATGGAATTGCACAAGGGTTTTGTTAGATCATCAACGAGCTGTTCTT
AGAAGAGCGAAACGGTCTTCAGAGCCGTTACCCCCGGCTTATTCCGACGCCAGCTGTCTCGGCCCCACGGGGATCATTATATATCCCTCCCGAACTCACACTCTC
TTCTTCAGAACATTCTCGCACAAGAATCGGAGCGCTCCATCAACGGTCTCCTCTCTTCTGAACGCTCGTTGCCGAAATCAAACGCTAGATAATTACCAAGCAATT
GGAGGAAGAGAGAGCAGAATCGAAAGGAGTTTGTCGCCTGATCCCGGTGATGAAAAATACAGAAAAGCAGTTGATCCTGTCGGGATTTTCGAATCTGCTAGGAAT
ACTGTTGTGAATTGTAGCTTTAGCTGCTTTATTGATCTTCGGTTTTACTTGAAAAAGGATGTACTGAAAGTCATGATGATGAACGATATGAGAGACATACTAGTG
CCTGGATCAATTTTTGAGACTGATTTGAGTCAAGGGCAGAATGATGGCAATCAATTTGTTGAAATCGAAGATGGAAATGGAGGACATAGATGGAGATGATAAAGT
GGAGGTCAAGGAATCTAACTCCGGTTGCTACTTTCAACACTCCACAGACATGGCATTGGATTAAGGAGGAGGGGGGTTTTCTTGCGAACAGTGAGCCCATTTTCT
TCTTCGACGCTCAGATCACAGTC
Protein sequenceShow/hide protein sequence
MLQIKQGDTRDMKQIMGSGKVHSMGPEKEALMGRKSSHGNEEMKAMAVETNGSHEWNCTRVLLDHQRAVLRRAKRSSEPLPPAYSDASCLGPTGIIIYPSRTHTL
FFRTFSHKNRSAPSTVSSLLNARCRNQTLDNYQAIGGRESRIERSLSPDPGDEKYRKAVDPVGIFESARNTVVNCSFSCFIDLRFYLKKDVLKVMMMNDMRDILV
PGSIFETDLSQGQNDGNQFVEIEDGNGGHRWR