; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh18G004530 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh18G004530
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationCma_Chr18:2507598..2509482
RNA-Seq ExpressionCmaCh18G004530
SyntenyCmaCh18G004530
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AXF54227.1 COR1 [Cucurbita pepo]9.4e-11399.12Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSPFL KSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS AGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSFLLVI
        FRRAFDQNSIVATVAIICVTAVSFLLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSFLLVI

XP_022955155.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita moschata]6.1e-11298.25Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSFLLVI
        FRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSFLLVI

XP_022994878.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 [Cucurbita maxima]4.2e-11398.28Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
        MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPI    RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS

Query:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
        VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
Subjt:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS

Query:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI
        RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI
Subjt:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]7.7e-115100Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSFLLVI
        FRRAFDQNSIVATVAIICVTAVSFLLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSFLLVI

XP_023542165.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurbita pepo subsp. pepo]1.6e-11298.68Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        +VCVLSSAISLHSPFL KSKLSAPLSLRSSLPNAKLTFNPAAKQ SICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSFLLVI
        FRRAFDQNSIVATVAIICVTAVSFLLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSFLLVI

TrEMBL top hitse value%identityAlignment
A0A345BTH0 COR14.5e-11399.12Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSPFL KSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS AGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSFLLVI
        FRRAFDQNSIVATVAIICVTAVSFLLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSFLLVI

A0A6J1GT59 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X11.6e-11096.55Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
        MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPI    RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS

Query:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
        VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
Subjt:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS

Query:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI
        RAGSFRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI

A0A6J1GUE0 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X22.9e-11298.25Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSFLLVI
        FRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSFLLVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X23.7e-115100Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSFLLVI
        FRRAFDQNSIVATVAIICVTAVSFLLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSFLLVI

A0A6J1K438 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X12.0e-11398.28Show/hide
Query:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
        MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPI    RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
Subjt:  MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS

Query:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
        VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
Subjt:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS

Query:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI
        RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI
Subjt:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic1.3e-5958.26Show/hide
Query:  VCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVI
        +C+ SS I      LH  K    L LR   P            S +C NP+R       ++T++    K+R+RG S VCYA P LS  NLQWISTIS V 
Subjt:  VCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVI

Query:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRA
        LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRA
Subjt:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRA

Query:  GSFRRAFDQNSIVATVAIICVTAVSFLLVI
        G+ ++AFDQNS++ATVAII VT VSFL +I
Subjt:  GSFRRAFDQNSIVATVAIICVTAVSFLLVI

O23164 Cold-regulated 413 plasma membrane protein 43.3e-1232.86Show/hide
Query:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT
        LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G 
Subjt:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV
        +I L+IA YL  +H   +G F+ +F Q N I  T+ I+ +
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic2.1e-5956.47Show/hide
Query:  VCVLSSAI-SLH--SPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISS
        +C+ SS I SLH   PFL     S P  L S L             S +C NP+R       ++T++  + K+R+RG S VCYA P+SA +LQWISTIS 
Subjt:  VCVLSSAI-SLH--SPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISS

Query:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
        + LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFS
Subjt:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS

Query:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI
        RAGS  +A+++ S++ATVAII VT VS LL++
Subjt:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 22.6e-1232.61Show/hide
Query:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGT
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  GT
Subjt:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAII
        +ISL I  YL  +H   +G FR +F Q   +  T+ II
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAII

Q9XIM7 Cold-regulated 413 plasma membrane protein 11.4e-1035Show/hide
Query:  LQWISTISSV-ILMLAR---GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT
        L+W+++I+++ +L+L R    T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R +  G 
Subjt:  LQWISTISSV-ILMLAR---GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV
         I L I  YL  +H   +G FR AF + N I  TV IIC+
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 28.9e-6158.26Show/hide
Query:  VCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVI
        +C+ SS I      LH  K    L LR   P            S +C NP+R       ++T++    K+R+RG S VCYA P LS  NLQWISTIS V 
Subjt:  VCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVI

Query:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRA
        LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRA
Subjt:  LMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRA

Query:  GSFRRAFDQNSIVATVAIICVTAVSFLLVI
        G+ ++AFDQNS++ATVAII VT VSFL +I
Subjt:  GSFRRAFDQNSIVATVAIICVTAVSFLLVI

AT1G29390.2 cold regulated 314 thylakoid membrane 23.7e-5972.22Show/hide
Query:  KKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVA
        K+R+RG S VCYA P LS  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVA
Subjt:  KKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVA

Query:  PYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI
        PYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVAII VT VSFL +I
Subjt:  PYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 11.5e-6056.47Show/hide
Query:  VCVLSSAI-SLH--SPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISS
        +C+ SS I SLH   PFL     S P  L S L             S +C NP+R       ++T++  + K+R+RG S VCYA P+SA +LQWISTIS 
Subjt:  VCVLSSAI-SLH--SPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISS

Query:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
        + LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFS
Subjt:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS

Query:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI
        RAGS  +A+++ S++ATVAII VT VS LL++
Subjt:  RAGSFRRAFDQNSIVATVAIICVTAVSFLLVI

AT3G50830.1 cold-regulated 413-plasma membrane 21.8e-1332.61Show/hide
Query:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGT
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  GT
Subjt:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAII
        +ISL I  YL  +H   +G FR +F Q   +  T+ II
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAII

AT4G37220.1 Cold acclimation protein WCOR413 family2.4e-1332.86Show/hide
Query:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT
        LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G 
Subjt:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV
        +I L+IA YL  +H   +G F+ +F Q N I  T+ I+ +
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTGTATTATCTTCTGCTATTTCACTTCACAGTCCCTTTCTACACAAATCCAAGCTATCCGCCCCTCTCTCTCTAAGATCCTCTCTGCCGAATGCAAAA
CTCACGTTTAATCCTGCCGCTAAACAGAGCTCGATATGTTCTAATCCGATCAGGTTTGGTTTCGGTAGCGACGTGAGTTCGACGTTGGCGATTAATAAGAAGAGG
AGGCGTGGTTTGAGTGCTGTATGTTACGCGATGCCTCTTTCTGCTCGCAATCTTCAGTGGATCTCTACTATTTCTTCTGTGATTTTAATGCTCGCAAGGGGGACT
GGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCTCCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATTTGGAGCGCATTTTTGGCC
CTTCTTGTTCGTCTGTTTTTCTTCATCCCTGGTGAACTCGAAATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGA
ACTCAAGAAGGGACCATCATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATT
GTTGCAACAGTGGCAATCATTTGTGTAACGGCTGTCTCATTCCTGCTCGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
TAATATTTCTGCTATCCATTATAAATTGAAGAAACTGAAAATAAGATTGACGTGTTCGAGTTGAACGACAATTGGCCCAATCACTACACTTCGGTTAGGCGGCTC
TGGATTCTTCGTGTTCATCAGTCAGGCAAGCGACGATTTGCTTGTTGAATCAAAACTAGAGAATCGAAAGCATCGTTTACGGTCCAAATCTGAGAGAAGATAGAA
GCTGAACCAGACAACGGAAGAAAGGGGAAATGGTTTGTGTATTATCTTCTGCTATTTCACTTCACAGTCCCTTTCTACACAAATCCAAGCTATCCGCCCCTCTCT
CTCTAAGATCCTCTCTGCCGAATGCAAAACTCACGTTTAATCCTGCCGCTAAACAGAGCTCGATATGTTCTAATCCGATCAGGTTTGGTTTCGGTAGCGACGTGA
GTTCGACGTTGGCGATTAATAAGAAGAGGAGGCGTGGTTTGAGTGCTGTATGTTACGCGATGCCTCTTTCTGCTCGCAATCTTCAGTGGATCTCTACTATTTCTT
CTGTGATTTTAATGCTCGCAAGGGGGACTGGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCTCCTGCAAGTGTTATCTCGTGGATTAAAGGAG
AATATGGCATTTGGAGCGCATTTTTGGCCCTTCTTGTTCGTCTGTTTTTCTTCATCCCTGGTGAACTCGAAATACCATTCATATCATTACTTTTGGTGATTGTGG
CCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGACCATCATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCT
TTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTGGCAATCATTTGTGTAACGGCTGTCTCATTCCTGCTCGTGATCTGA
Protein sequenceShow/hide protein sequence
MVCVLSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGT
GIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSI
VATVAIICVTAVSFLLVI