; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh18G008580 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh18G008580
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationCma_Chr18:7489921..7491726
RNA-Seq ExpressionCmaCh18G008580
SyntenyCmaCh18G008580
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573801.1 Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-15197.22Show/hide
Query:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA
        MLGLRDVLFLAPTSTSDHH SLPLHSPAALGVSVGIFPLLAATPSL PPPP PPPN+TAEEVSDRTRS +NLK+THDFGFGKGDSFIAGDKGDAGESSMA
Subjt:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA

Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
        VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS

Query:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
        RSFETTSNHQDASFKKSLPGQVR PAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Subjt:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE

XP_022138928.1 protein LATERAL ROOT PRIMORDIUM 1 [Momordica charantia]2.8e-12279.68Show/hide
Query:  MLGLRDVLFLAPTS-----------TSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAG
        MLGLRDVLF+APT            +SDHHPSLPL S AALGVSVGIFPLLAATP LP PPPPPPP   A EVS+R R  +NLKRT DFGFGKGDS IAG
Subjt:  MLGLRDVLFLAPTS-----------TSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAG

Query:  D--------KGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
                 +GDAG+SSM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV A+RRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  D--------KGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTPPAA---ASHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHL
        QST  AA   ASHAS S ATT RSFET+SNHQDASFKKSLPGQVR PAVFR HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG +D KNG+PS+SHL
Subjt:  QSTPPAA---ASHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHL

Query:  HLESGSHHRE
        HLESG+HH +
Subjt:  HLESGSHHRE

XP_022945608.1 protein SHI RELATED SEQUENCE 6-like [Cucurbita moschata]7.1e-15097.22Show/hide
Query:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA
        MLGLRDVLFLAPTSTSDHH SLPLHSPAALGVSVGIFPLLAATPSL PPPP PPPN+TAEEVSDRTRS ENLK+THDFGFGKGDSFIAGDKGDAGESSMA
Subjt:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA

Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
        VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQST PAAASHASASIATTS
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS

Query:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
        RSFETTSNHQDASFKKSLPGQVR PAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Subjt:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE

XP_022967015.1 protein SHI RELATED SEQUENCE 6-like [Cucurbita maxima]7.1e-158100Show/hide
Query:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA
        MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA
Subjt:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA

Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
        VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS

Query:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
        RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Subjt:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE

XP_023541249.1 protein SHI RELATED SEQUENCE 6-like [Cucurbita pepo subsp. pepo]3.4e-15297.57Show/hide
Query:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA
        MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSL  PPPP PPN+TAEEVSDRTRS ENLK+THDFGFGKGDSFIAGDKGDAGESSMA
Subjt:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA

Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
        VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS

Query:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
        RSFETTSNHQDASFKKSLPGQVR PAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Subjt:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE

TrEMBL top hitse value%identityAlignment
A0A0A0KWX6 Uncharacterized protein2.6e-12178.83Show/hide
Query:  MLGLRDVLFLAPTS----------TSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGD
        MLGLRDVLF+APT           +SDHHPSLPL S  ALGVSVGIFPLLAATP L PP  PPP N T ++V+DRTR+ +NLKRT DFGFGKG+S IAG 
Subjt:  MLGLRDVLFLAPTS----------TSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGD

Query:  ---------KGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
                 KGDAG+ SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  ---------KGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTPPAAASHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLE
        QS   AAA+ AS S ATT RSFETTS+HQDASFKKSLPG VR PAVFR HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG  D KN +PS+SHLHL+
Subjt:  QSTPPAAASHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLE

Query:  SGSHHRE
        SG+HHRE
Subjt:  SGSHHRE

A0A1S3BFS5 protein LATERAL ROOT PRIMORDIUM 17.5e-12178.5Show/hide
Query:  MLGLRDVLFLAPTS----------TSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGD
        MLGLRDVLF+APT           +SDHHPSLPL S  ALGVSVGIFPLLAATP L PP  PPP N T ++V+DRTR+ +NLKRT DFGFGKG+S I G 
Subjt:  MLGLRDVLFLAPTS----------TSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGD

Query:  ---------KGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
                 KGDAG+ SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  ---------KGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTPPAAASHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLE
        QS   AAA+ AS S ATT RSFETTS+HQDASFKKSLPG VR PAVFR HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG  D KN +PS+SHLHL+
Subjt:  QSTPPAAASHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLE

Query:  SGSHHRE
        SG+HHRE
Subjt:  SGSHHRE

A0A6J1CEG6 protein LATERAL ROOT PRIMORDIUM 11.4e-12279.68Show/hide
Query:  MLGLRDVLFLAPTS-----------TSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAG
        MLGLRDVLF+APT            +SDHHPSLPL S AALGVSVGIFPLLAATP LP PPPPPPP   A EVS+R R  +NLKRT DFGFGKGDS IAG
Subjt:  MLGLRDVLFLAPTS-----------TSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAG

Query:  D--------KGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
                 +GDAG+SSM VCRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV A+RRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
Subjt:  D--------KGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTPPAA---ASHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHL
        QST  AA   ASHAS S ATT RSFET+SNHQDASFKKSLPGQVR PAVFR HRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG +D KNG+PS+SHL
Subjt:  QSTPPAA---ASHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHL

Query:  HLESGSHHRE
        HLESG+HH +
Subjt:  HLESGSHHRE

A0A6J1G1D4 protein SHI RELATED SEQUENCE 6-like3.4e-15097.22Show/hide
Query:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA
        MLGLRDVLFLAPTSTSDHH SLPLHSPAALGVSVGIFPLLAATPSL PPPP PPPN+TAEEVSDRTRS ENLK+THDFGFGKGDSFIAGDKGDAGESSMA
Subjt:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA

Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
        VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQST PAAASHASASIATTS
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS

Query:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
        RSFETTSNHQDASFKKSLPGQVR PAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Subjt:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE

A0A6J1HT71 protein SHI RELATED SEQUENCE 6-like3.4e-158100Show/hide
Query:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA
        MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA
Subjt:  MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMA

Query:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
        VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS
Subjt:  VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTS

Query:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
        RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE
Subjt:  RSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 14.6e-2741.95Show/hide
Query:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTSR
        C+DCGN+AKK+C++ RCRTCCK RG  C THVKSTWVPA++RRERQ  +           G ++ +++   KR       Q   P+A+S  S  + + + 
Subjt:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTSR

Query:  SFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSL
          E              P +VRT AVF+  ++++I   E +LAYQA V+IGGHVFKG LYDQG   H++ Y ++
Subjt:  SFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSL

O65517 Protein SHI RELATED SEQUENCE 21.5e-3046.67Show/hide
Query:  DKGDAGESSMAV---CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPP
        D  D   SS ++   CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P +RRRERQ  + M    + SG GG SGS  AG       IP +   P
Subjt:  DKGDAGESSMAV---CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPP

Query:  AAASHASAS-IATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQG
             +S+S + + S   E      +ASF    PG+V + A+FR  +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG
Subjt:  AAASHASAS-IATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQG

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 12.1e-4843.46Show/hide
Query:  MLGLRDVLFLAPT---------STSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEV-----SDRTRSSENLKRTHDFGFGKGDSF
        M+GLRDV  +AP          S SDH  S   ++ AA  + VG+ PLL A          P  N    ++     + R +++ N   T    F   +  
Subjt:  MLGLRDVLFLAPT---------STSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEV-----SDRTRSSENLKRTHDFGFGKGDSF

Query:  IAGDKGD-----AGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
          G   +     +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  IAGDKGD-----AGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTPPAAASHASASIATTSRSFETTSNHQD-ASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHL
        Q     A SH S S  T  +SFET+S+ QD    +++ PGQVR  AVF+  RVTA+  G+ E AYQA V IGGHVFKGFLYDQG ++ K G+PS+S LHL
Subjt:  QSTPPAAASHASASIATTSRSFETTSNHQD-ASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHL

Query:  ESGSHH
           +++
Subjt:  ESGSHH

Q9LQZ5 Protein SHI RELATED SEQUENCE 57.9e-2743.18Show/hide
Query:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTSR
        C+DCGN+AKK+C + RCRTCCK RG HC THVKSTWVPA++RRER     +  +A+      SS   +  AKR R      +      S    S    +R
Subjt:  CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTSR

Query:  SFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGE--LAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSL
             SN       + LP +V +PA+FR  RV++I   E +   AYQ  VNIGGH+FKG LYDQG     N + +L
Subjt:  SFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGEGE--LAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSL

Q9M2U4 Protein SHI RELATED SEQUENCE 61.4e-3143.62Show/hide
Query:  DKGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAA
        D    GE    VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P+S  R                      SSS   ++ ++ I  QS+P  + 
Subjt:  DKGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAA

Query:  SHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLS
                       TT++ Q+  F++ LPG++  PAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G VDH   +P LS
Subjt:  SHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLS

Arabidopsis top hitse value%identityAlignment
AT3G54430.1 SHI-related sequence 69.9e-3343.62Show/hide
Query:  DKGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAA
        D    GE    VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P+S  R                      SSS   ++ ++ I  QS+P  + 
Subjt:  DKGDAGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAA

Query:  SHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLS
                       TT++ Q+  F++ LPG++  PAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  G VDH   +P LS
Subjt:  SHASASIATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLS

AT4G36260.1 Lateral root primordium (LRP) protein-related1.1e-3146.67Show/hide
Query:  DKGDAGESSMAV---CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPP
        D  D   SS ++   CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P +RRRERQ  + M    + SG GG SGS  AG       IP +   P
Subjt:  DKGDAGESSMAV---CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPP

Query:  AAASHASAS-IATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQG
             +S+S + + S   E      +ASF    PG+V + A+FR  +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG
Subjt:  AAASHASAS-IATTSRSFETTSNHQDASFKKSLPGQVRTPAVFRYHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQG

AT5G12330.1 Lateral root primordium (LRP) protein-related1.5e-4943.46Show/hide
Query:  MLGLRDVLFLAPT---------STSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEV-----SDRTRSSENLKRTHDFGFGKGDSF
        M+GLRDV  +AP          S SDH  S   ++ AA  + VG+ PLL A          P  N    ++     + R +++ N   T    F   +  
Subjt:  MLGLRDVLFLAPT---------STSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEV-----SDRTRSSENLKRTHDFGFGKGDSF

Query:  IAGDKGD-----AGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
          G   +     +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  IAGDKGD-----AGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTPPAAASHASASIATTSRSFETTSNHQD-ASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHL
        Q     A SH S S  T  +SFET+S+ QD    +++ PGQVR  AVF+  RVTA+  G+ E AYQA V IGGHVFKGFLYDQG ++ K G+PS+S LHL
Subjt:  QSTPPAAASHASASIATTSRSFETTSNHQD-ASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHL

Query:  ESGSHH
           +++
Subjt:  ESGSHH

AT5G12330.2 Lateral root primordium (LRP) protein-related1.5e-4943.46Show/hide
Query:  MLGLRDVLFLAPT---------STSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEV-----SDRTRSSENLKRTHDFGFGKGDSF
        M+GLRDV  +AP          S SDH  S   ++ AA  + VG+ PLL A          P  N    ++     + R +++ N   T    F   +  
Subjt:  MLGLRDVLFLAPT---------STSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEV-----SDRTRSSENLKRTHDFGFGKGDSF

Query:  IAGDKGD-----AGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
          G   +     +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  IAGDKGD-----AGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTPPAAASHASASIATTSRSFETTSNHQD-ASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHL
        Q     A SH S S  T  +SFET+S+ QD    +++ PGQVR  AVF+  RVTA+  G+ E AYQA V IGGHVFKGFLYDQG ++ K G+PS+S LHL
Subjt:  QSTPPAAASHASASIATTSRSFETTSNHQD-ASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHL

Query:  ESGSHH
           +++
Subjt:  ESGSHH

AT5G12330.4 Lateral root primordium (LRP) protein-related1.5e-4943.46Show/hide
Query:  MLGLRDVLFLAPT---------STSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEV-----SDRTRSSENLKRTHDFGFGKGDSF
        M+GLRDV  +AP          S SDH  S   ++ AA  + VG+ PLL A          P  N    ++     + R +++ N   T    F   +  
Subjt:  MLGLRDVLFLAPT---------STSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEV-----SDRTRSSENLKRTHDFGFGKGDSF

Query:  IAGDKGD-----AGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS
          G   +     +G S  A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV A+RRRERQ++        A+   GSS S+S+G K+PR++   
Subjt:  IAGDKGD-----AGESSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPS

Query:  QSTPPAAASHASASIATTSRSFETTSNHQD-ASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHL
        Q     A SH S S  T  +SFET+S+ QD    +++ PGQVR  AVF+  RVTA+  G+ E AYQA V IGGHVFKGFLYDQG ++ K G+PS+S LHL
Subjt:  QSTPPAAASHASASIATTSRSFETTSNHQD-ASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHL

Query:  ESGSHH
           +++
Subjt:  ESGSHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTCTCAGAGATGTTCTGTTTTTAGCTCCGACGTCTACTTCCGATCATCATCCTTCTCTTCCTCTCCACTCCCCTGCCGCTCTCGGTGTCAGCGTTGGC
ATTTTTCCACTTTTAGCGGCAACCCCATCTCTCCCGCCTCCTCCTCCTCCTCCGCCGCCTAATCGGACGGCCGAGGAAGTTAGTGATCGTACTCGGAGTTCGGAG
AATCTGAAGAGAACCCATGATTTTGGGTTTGGGAAAGGGGATTCGTTTATTGCCGGCGACAAAGGAGACGCCGGCGAGAGCTCCATGGCGGTTTGTAGGGACTGT
GGAAACAGAGCAAAAAAAGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGTAAAGGACGTGGGAATCATTGCTCTACTCATGTGAAGAGTACGTGGGTTCCGGCG
TCTCGCCGCCGTGAACGTCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGTGGTTCTTCTGGTTCTTCGTCTGCTGGTGCTAAAAGACCC
AGAGTTTTGATTCCTTCGCAGAGTACTCCTCCCGCCGCCGCCTCTCACGCTTCTGCCTCCATTGCCACCACCTCCCGGAGCTTTGAAACAACCTCCAACCATCAA
GATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGTACCCCGGCGGTGTTCCGGTACCATAGAGTGACAGCCATTAGCAGTGGTGAAGGAGAGTTAGCATAC
CAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTGTATGATCAAGGAGTTGTTGATCACAAAAATGGATACCCATCTCTTTCACATCTTCATTTG
GAAAGTGGTAGCCATCACAGGGAATAG
mRNA sequenceShow/hide mRNA sequence
AAAACAACCTTGTCACTGCAGAGTTTGAAGAATTATTCATTCCACTTCATCTTCTTCCTGTTTTTTCCCTCCTCTGTTACTGTGAATTCAGAGAAATCCCCCGCC
ATGAACACACCAACATCATTCCATTTGCTTTCCTCTTAACAAATTTATTCATCGTTTAAGTACTGTTCTTCCCAAATCTGAAACGCCCTCTTCAGTTTGTTCCAA
TCAATCATCTTCTTCACTCTGTTTTTCAATGTTGGGTCTCAGAGATGTTCTGTTTTTAGCTCCGACGTCTACTTCCGATCATCATCCTTCTCTTCCTCTCCACTC
CCCTGCCGCTCTCGGTGTCAGCGTTGGCATTTTTCCACTTTTAGCGGCAACCCCATCTCTCCCGCCTCCTCCTCCTCCTCCGCCGCCTAATCGGACGGCCGAGGA
AGTTAGTGATCGTACTCGGAGTTCGGAGAATCTGAAGAGAACCCATGATTTTGGGTTTGGGAAAGGGGATTCGTTTATTGCCGGCGACAAAGGAGACGCCGGCGA
GAGCTCCATGGCGGTTTGTAGGGACTGTGGAAACAGAGCAAAAAAAGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGTAAAGGACGTGGGAATCATTGCTCTAC
TCATGTGAAGAGTACGTGGGTTCCGGCGTCTCGCCGCCGTGAACGTCAGATGTTGGTGGTGATGGACGGCGTCGCCACTGCTAGTGGCGACGGTGGTTCTTCTGG
TTCTTCGTCTGCTGGTGCTAAAAGACCCAGAGTTTTGATTCCTTCGCAGAGTACTCCTCCCGCCGCCGCCTCTCACGCTTCTGCCTCCATTGCCACCACCTCCCG
GAGCTTTGAAACAACCTCCAACCATCAAGATGCAAGCTTCAAGAAGTCGTTACCGGGGCAAGTTCGTACCCCGGCGGTGTTCCGGTACCATAGAGTGACAGCCAT
TAGCAGTGGTGAAGGAGAGTTAGCATACCAAGCAACAGTCAACATTGGTGGCCATGTCTTCAAAGGCTTTCTGTATGATCAAGGAGTTGTTGATCACAAAAATGG
ATACCCATCTCTTTCACATCTTCATTTGGAAAGTGGTAGCCATCACAGGGAATAGAGACATTCCTCCTCTTCTTTCTTCCTAAACTCTTCGTCCTAACGATTACC
CGAAACCTCGGTCTCACCTCGGGTCTTGGCTCTCGGCTCGGAACCTTGAAAGATATCATATCTCTACTAGGATGAAGCAAGCTAGCTTGTCCACATCTCTTGTTT
GATTGTCTATCTAAGAAATGCTCGTAACCGTCGAGTATCTACTTGTGAATGCTATCTTTTAGCTACATATGGATCTTTTCTAATTATGATTGAGACCGTGTTCAT
CGTGAATATGTAGTAGGAAGCTATATAAATGAAGTTGAAGCCAACACGAGAAGGCGAACAAAATCCATAGCTCACTATCACACCCTAGTCTTTTCAAGTATTATT
GGCCCCTCATTGTACAAAGTGTAGGAAACAACTCCGACTACATATCATAGCAAATAGCAAAGAAACGTGACTAAACGGTACGCAAAAAAGATGTTCGAGAACCCA
AGGCTCAT
Protein sequenceShow/hide protein sequence
MLGLRDVLFLAPTSTSDHHPSLPLHSPAALGVSVGIFPLLAATPSLPPPPPPPPPNRTAEEVSDRTRSSENLKRTHDFGFGKGDSFIAGDKGDAGESSMAVCRDC
GNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSTPPAAASHASASIATTSRSFETTSNHQ
DASFKKSLPGQVRTPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVVDHKNGYPSLSHLHLESGSHHRE