; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh18G013380 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh18G013380
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionhomeobox-leucine zipper protein ATHB-12-like
Genome locationCma_Chr18:10196929..10197525
RNA-Seq ExpressionCmaCh18G013380
SyntenyCmaCh18G013380
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR003106 - Leucine zipper, homeobox-associated
IPR009057 - Homeobox-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013331.1 Homeobox-leucine zipper protein ATHB-7, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-6176.74Show/hide
Query:  MERQEYIKIQNFEVTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMENDFR
        MERQEYIKIQ+ EV  SQTCPTPRR+KKKKKKSNNMNKRRFSDEQ+                       + +GLQPRQISIWFQNRRARWKSKQMENDFR
Subjt:  MERQEYIKIQNFEVTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMENDFR

Query:  RLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
         LRASY+NLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYS +FGKNADENQAK EILEDEPEQN +T+
Subjt:  RLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

XP_022923068.1 homeobox-leucine zipper protein ATHB-12-like isoform X1 [Cucurbita moschata]1.5e-3957.39Show/hide
Query:  MERQEYIKIQNFE---VTPSQTCPTP-RRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQME
        MER+EY  + NFE   V  SQTC TP RRR+++KKK+NNMNKRRFSDEQ+                       + +GLQPRQI+IWFQNRRARWKSK+ME
Subjt:  MERQEYIKIQNFE---VTPSQTCPTP-RRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQME

Query:  NDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
        N+FR LRA+Y+NLASQF+TLQEE NSLLSQLQKL ELV E P EG YSN+  +   E + K +   DE  QN +TY
Subjt:  NDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

XP_022923069.1 homeobox-leucine zipper protein ATHB-12-like isoform X2 [Cucurbita moschata]1.5e-3957.39Show/hide
Query:  MERQEYIKIQNFE---VTPSQTCPTP-RRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQME
        MER+EY  + NFE   V  SQTC TP RRR+++KKK+NNMNKRRFSDEQ+                       + +GLQPRQI+IWFQNRRARWKSK+ME
Subjt:  MERQEYIKIQNFE---VTPSQTCPTP-RRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQME

Query:  NDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
        N+FR LRA+Y+NLASQF+TLQEE NSLLSQLQKL ELV E P EG YSN+  +   E + K +   DE  QN +TY
Subjt:  NDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

XP_022945963.1 homeobox-leucine zipper protein ATHB-12-like [Cucurbita moschata]6.4e-6277.33Show/hide
Query:  MERQEYIKIQNFEVTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMENDFR
        MER EYIKIQN EV  SQTCPTPRR+KKKKKKSNNMNKRRFSDEQ+                       + +GLQPRQISIWFQNRRARWKSKQMENDFR
Subjt:  MERQEYIKIQNFEVTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMENDFR

Query:  RLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
         LRASY+NLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYS +FGKNADENQAK EILEDEPEQN +TY
Subjt:  RLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

XP_023541562.1 homeobox-leucine zipper protein ATHB-12-like [Cucurbita pepo subsp. pepo]1.4e-6175.28Show/hide
Query:  MERQEYIKIQNFEVTPSQTCPTPRR------RKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQ
        MERQEYIKIQNFEV  SQTCPTPRR      +KKKKKKSNNMNKRRFSDEQ+                       + +GLQPRQIS+WFQNRRARWKSKQ
Subjt:  MERQEYIKIQNFEVTPSQTCPTPRR------RKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQ

Query:  MENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
        MENDFR LRASY+NLASQFRTLQEENNSLLSQLQKLGELV+EEPGEGCYSN+FGKNADENQAK EILEDEPEQN +TY
Subjt:  MENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

TrEMBL top hitse value%identityAlignment
A0A6J1E599 homeobox-leucine zipper protein ATHB-12-like isoform X27.5e-4057.39Show/hide
Query:  MERQEYIKIQNFE---VTPSQTCPTP-RRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQME
        MER+EY  + NFE   V  SQTC TP RRR+++KKK+NNMNKRRFSDEQ+                       + +GLQPRQI+IWFQNRRARWKSK+ME
Subjt:  MERQEYIKIQNFE---VTPSQTCPTP-RRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQME

Query:  NDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
        N+FR LRA+Y+NLASQF+TLQEE NSLLSQLQKL ELV E P EG YSN+  +   E + K +   DE  QN +TY
Subjt:  NDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

A0A6J1E8K2 homeobox-leucine zipper protein ATHB-12-like isoform X17.5e-4057.39Show/hide
Query:  MERQEYIKIQNFE---VTPSQTCPTP-RRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQME
        MER+EY  + NFE   V  SQTC TP RRR+++KKK+NNMNKRRFSDEQ+                       + +GLQPRQI+IWFQNRRARWKSK+ME
Subjt:  MERQEYIKIQNFE---VTPSQTCPTP-RRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQME

Query:  NDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
        N+FR LRA+Y+NLASQF+TLQEE NSLLSQLQKL ELV E P EG YSN+  +   E + K +   DE  QN +TY
Subjt:  NDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

A0A6J1G2H1 homeobox-leucine zipper protein ATHB-12-like3.1e-6277.33Show/hide
Query:  MERQEYIKIQNFEVTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMENDFR
        MER EYIKIQN EV  SQTCPTPRR+KKKKKKSNNMNKRRFSDEQ+                       + +GLQPRQISIWFQNRRARWKSKQMENDFR
Subjt:  MERQEYIKIQNFEVTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMENDFR

Query:  RLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
         LRASY+NLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYS +FGKNADENQAK EILEDEPEQN +TY
Subjt:  RLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

A0A6J1J3H1 homeobox-leucine zipper protein ATHB-12-like isoform X21.4e-3857.14Show/hide
Query:  MERQEYIKIQNFE---VTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMEN
        MERQEY  + NFE   V  SQ C TPRRR  +KKK+NN NKRRFSDEQ+                       + +GLQPRQI+IWFQNRR RWKSK+MEN
Subjt:  MERQEYIKIQNFE---VTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMEN

Query:  DFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
        +FR LRA+Y+NLASQF+TLQEE NSLLSQLQKL ELVQE P EG YSN+  K   E + K +   DE  Q+ +TY
Subjt:  DFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

A0A6J1J6P1 homeobox-leucine zipper protein ATHB-12-like isoform X11.4e-3857.14Show/hide
Query:  MERQEYIKIQNFE---VTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMEN
        MERQEY  + NFE   V  SQ C TPRRR  +KKK+NN NKRRFSDEQ+                       + +GLQPRQI+IWFQNRR RWKSK+MEN
Subjt:  MERQEYIKIQNFE---VTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQV-----------------------SRVGLQPRQISIWFQNRRARWKSKQMEN

Query:  DFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY
        +FR LRA+Y+NLASQF+TLQEE NSLLSQLQKL ELVQE P EG YSN+  K   E + K +   DE  Q+ +TY
Subjt:  DFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY

SwissProt top hitse value%identityAlignment
P46667 Homeobox-leucine zipper protein ATHB-51.7e-1243.62Show/hide
Query:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQ---AKQEILE
        +GLQPRQ++IWFQNRRARWK+KQ+E D+  L+++++ L     +LQ +N+SLL Q+++L   +  E  +G   N   K  + NQ   A  E+LE
Subjt:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQ---AKQEILE

P46897 Homeobox-leucine zipper protein ATHB-75.9e-1843.41Show/hide
Query:  EVTPSQTCPTPRRRKKKKKKSNN--MNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLAS
        E +P+     P    KK KKSN+   N+RRFSDEQ+                        +GLQPRQ++IWFQN+RARWKSKQ+E ++  LR +Y+NLAS
Subjt:  EVTPSQTCPTPRRRKKKKKKSNN--MNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLAS

Query:  QFRTLQEENNSLLSQLQKLGELVQEEPGE
        QF +L++E  +L+S+LQ+L E  Q++  E
Subjt:  QFRTLQEENNSLLSQLQKLGELVQEEPGE

Q651Z5 Homeobox-leucine zipper protein HOX66.8e-1447.5Show/hide
Query:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNA
        +GLQPRQ++IWFQN+RARWKSKQ+E ++  LR  Y+ L   + +L++E  +L+ QL+KL E++QE  G+  Y ++ G +A
Subjt:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNA

Q9M276 Homeobox-leucine zipper protein ATHB-125.9e-1846.9Show/hide
Query:  KKKKKKSNNMNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQL
        KKK KKSN  N++RFS+EQ+                        +GLQPRQ++IWFQN+RARWK+KQ+E ++  LRA+YNNLASQF  +++E  SL+S+L
Subjt:  KKKKKKSNNMNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQL

Query:  QKLGELVQEEPGE
        Q+L E +Q    E
Subjt:  QKLGELVQEEPGE

Q9XH35 Homeobox-leucine zipper protein HOX66.8e-1447.5Show/hide
Query:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNA
        +GLQPRQ++IWFQN+RARWKSKQ+E ++  LR  Y+ L   + +L++E  +L+ QL+KL E++QE  G+  Y ++ G +A
Subjt:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNA

Arabidopsis top hitse value%identityAlignment
AT2G46680.1 homeobox 74.2e-1943.41Show/hide
Query:  EVTPSQTCPTPRRRKKKKKKSNN--MNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLAS
        E +P+     P    KK KKSN+   N+RRFSDEQ+                        +GLQPRQ++IWFQN+RARWKSKQ+E ++  LR +Y+NLAS
Subjt:  EVTPSQTCPTPRRRKKKKKKSNN--MNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLAS

Query:  QFRTLQEENNSLLSQLQKLGELVQEEPGE
        QF +L++E  +L+S+LQ+L E  Q++  E
Subjt:  QFRTLQEENNSLLSQLQKLGELVQEEPGE

AT2G46680.2 homeobox 71.5e-1641.86Show/hide
Query:  EVTPSQTCPTPRRRKKKKKKSNN--MNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLAS
        E +P+     P    KK KKSN+   N+RRFSDEQ+                        +GLQPRQ++IWFQN+RARWKSKQ+E ++  LR +Y+NLAS
Subjt:  EVTPSQTCPTPRRRKKKKKKSNN--MNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLAS

Query:  QFRTLQEENNSLLSQLQKLGELVQEEPGE
        QF +L++E  +L+S  ++L E  Q++  E
Subjt:  QFRTLQEENNSLLSQLQKLGELVQEEPGE

AT3G61890.1 homeobox 124.2e-1946.9Show/hide
Query:  KKKKKKSNNMNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQL
        KKK KKSN  N++RFS+EQ+                        +GLQPRQ++IWFQN+RARWK+KQ+E ++  LRA+YNNLASQF  +++E  SL+S+L
Subjt:  KKKKKKSNNMNKRRFSDEQVS----------------------RVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQL

Query:  QKLGELVQEEPGE
        Q+L E +Q    E
Subjt:  QKLGELVQEEPGE

AT5G65310.1 homeobox protein 51.2e-1343.62Show/hide
Query:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQ---AKQEILE
        +GLQPRQ++IWFQNRRARWK+KQ+E D+  L+++++ L     +LQ +N+SLL Q+++L   +  E  +G   N   K  + NQ   A  E+LE
Subjt:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQ---AKQEILE

AT5G65310.2 homeobox protein 51.2e-1343.62Show/hide
Query:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQ---AKQEILE
        +GLQPRQ++IWFQNRRARWK+KQ+E D+  L+++++ L     +LQ +N+SLL Q+++L   +  E  +G   N   K  + NQ   A  E+LE
Subjt:  VGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQKLGELVQEEPGEGCYSNDFGKNADENQ---AKQEILE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGACAGGAGTACATCAAAATACAAAATTTTGAAGTAACCCCTTCGCAGACATGTCCAACTCCTAGGAGGAGGAAGAAGAAGAAGAAGAAGAGCAACAAC
ATGAACAAAAGAAGGTTTAGTGATGAACAAGTCAGCCGAGTTGGACTCCAACCTCGCCAGATTTCTATCTGGTTTCAGAATAGAAGAGCAAGATGGAAGTCGAAG
CAGATGGAGAACGATTTCAGGAGACTCAGAGCTAGTTATAATAATCTAGCTTCTCAGTTTAGAACTTTACAGGAAGAGAACAACTCCTTGCTCTCACAGTTGCAA
AAGTTAGGTGAGCTTGTTCAAGAAGAACCTGGTGAGGGATGTTATTCGAATGATTTTGGAAAAAACGCTGATGAGAATCAAGCAAAGCAAGAAATCTTAGAAGAT
GAACCGGAACAGAATAGAATCACTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGACAGGAGTACATCAAAATACAAAATTTTGAAGTAACCCCTTCGCAGACATGTCCAACTCCTAGGAGGAGGAAGAAGAAGAAGAAGAAGAGCAACAAC
ATGAACAAAAGAAGGTTTAGTGATGAACAAGTCAGCCGAGTTGGACTCCAACCTCGCCAGATTTCTATCTGGTTTCAGAATAGAAGAGCAAGATGGAAGTCGAAG
CAGATGGAGAACGATTTCAGGAGACTCAGAGCTAGTTATAATAATCTAGCTTCTCAGTTTAGAACTTTACAGGAAGAGAACAACTCCTTGCTCTCACAGTTGCAA
AAGTTAGGTGAGCTTGTTCAAGAAGAACCTGGTGAGGGATGTTATTCGAATGATTTTGGAAAAAACGCTGATGAGAATCAAGCAAAGCAAGAAATCTTAGAAGAT
GAACCGGAACAGAATAGAATCACTTATTGA
Protein sequenceShow/hide protein sequence
MERQEYIKIQNFEVTPSQTCPTPRRRKKKKKKSNNMNKRRFSDEQVSRVGLQPRQISIWFQNRRARWKSKQMENDFRRLRASYNNLASQFRTLQEENNSLLSQLQ
KLGELVQEEPGEGCYSNDFGKNADENQAKQEILEDEPEQNRITY