CuGenDBv2

Gene ID	CmaCh19G000340
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	F-box domain-containing protein
Genome location	Cma_Chr19:186711..190644
RNA-Seq Expression	CmaCh19G000340
Synteny	CmaCh19G000340
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571465.1 hypothetical protein SDJN03_28193, partial [Cucurbita argyrosperma subsp. sororia]

9.4e-78

97.39

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKV
        LTGSLVIASSWLLIKSIAVTAVVLALIC+WWYIFLYSYPKAY+DMIAERRRK+
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKV

KAG7011228.1 hypothetical protein SDJN02_26131 [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-86

98.2

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALIC+WWYIFLYSYPKAY+DMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ

XP_022963485.1 uncharacterized protein LOC111463803 [Cucurbita moschata]

4.2e-86

97.6

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALIC+WWYIFLYSYPKAY+DMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ

XP_022967429.1 uncharacterized protein LOC111466970 [Cucurbita maxima]

3.5e-117

100

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Query:  MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVV
        MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVV
Subjt:  MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVV

Query:  FGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAER
        FGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAER
Subjt:  FGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAER

Query:  RRKVSDGVEDTFGVKRTQ
        RRKVSDGVEDTFGVKRTQ
Subjt:  RRKVSDGVEDTFGVKRTQ

XP_023553740.1 uncharacterized protein LOC111811218 [Cucurbita pepo subsp. pepo]

1.6e-85

97.6

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
        LTG LVIASSWLLIKSIAVTAVVL LIC+WWYIFLYSYPKAY+DMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KED9 Uncharacterized protein

4.4e-73

83.33

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Query:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MG VS FLA+SLR + FP STQTLLSNFAASSQ++SFTP CT+FR K++VFGKQS N+++SQFLDENG VNDMDGYLNYHSFEYDSVWDTKP+WCQPWTI
Subjt:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
        TLTG LVIASSW+ IKSIAVTAV+L LIC WWYIFLYSYPKAYS+MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ

A0A1S3BLE6 uncharacterized protein LOC103491324 isoform X1

4.4e-73

83.33

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Query:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTI
        MG +SL LATSL S+HFP STQTLLSNFAASSQ++SFTPKCT+FR K++VFGKQS  +++SQFLDENG V+DMDGYLNYHSFEYDSVWDTKPSWCQPWTI
Subjt:  MGTVSLFLATSLRSHHFP-STQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTI

Query:  TLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
        TLTG LVIASSW+ IKS+AVTAV+L LIC WWYIFLYSYPKAYS+MIAERRRKVSDG+EDTFGVKRTQ
Subjt:  TLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1CY32 uncharacterized protein LOC111015275

1.1e-68

78.24

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Query:  SMGTVSLFLATSLRSHHFP--STQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPW
        ++  V LFLATSLRSHHFP  STQTLL+NF A+SQVVS TP+CT+FRRK+VVFGKQS+N +ESQFLDENG V+DMDGYLNY S EYDSVWDTKPSWCQPW
Subjt:  SMGTVSLFLATSLRSHHFP--STQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPW

Query:  TITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
        TITLTG L+ ASSW +IKSIAVTAV+L++I  WWYIFLYSYPKAYS+MIAERR+KV+DG EDTFGV++TQ
Subjt:  TITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1HI50 uncharacterized protein LOC111463803

2.0e-86

97.6

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Query:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT
        MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQ VSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWT+T
Subjt:  MGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTIT

Query:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ
        LTGSLVIASSWLLIKSIAVTAVVLALIC+WWYIFLYSYPKAY+DMIAERRRKVSDGVEDTFGVKRTQ
Subjt:  LTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ

A0A6J1HWP2 uncharacterized protein LOC111466970

1.7e-117

100

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Query:  MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVV
        MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVV
Subjt:  MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVV

Query:  FGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAER
        FGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAER
Subjt:  FGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAER

Query:  RRKVSDGVEDTFGVKRTQ
        RRKVSDGVEDTFGVKRTQ
Subjt:  RRKVSDGVEDTFGVKRTQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02725.1 unknown protein

7.0e-39

49.37

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Query:  SLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGS
        SL ++    S   P T+ LLS  +  + + SF  K  R   K   FG       +S+F+DE G V+DM+G+L+  S EYDSVWDTKPSWCQPWTI LTG 
Subjt:  SLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGS

Query:  LVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFG
         ++A SW+++ S+ V+++ + +I  WWYIFLYSYPK+YS+MIAERR++V+DG ED +G
Subjt:  LVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFG

AT4G02725.2 unknown protein

2.9e-29

47.06

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Query:  SLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGS
        SL ++    S   P T+ LLS  +  + + SF  K  R   K   FG       +S+F+DE G V+DM+G+L+  S EYDSVWDTKPSWCQPWTI LTG 
Subjt:  SLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDESQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGS

Query:  LVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPK
         ++A SW+++ S+ V+++ + +I  WWYIFLYSYPK
Subjt:  LVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPK

Sequences

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CDS sequence

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ATGGGGTATGGCTCAGCCGGTGCATCGAATTTTGTGGGCCACGAAGTTTATCCTTTGCTAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATAAT
TAGCAGACTACTTGGAAGTGGCCGCCATACAAAACCCAAATCTATGGGAACTGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCACCATTTTCCTTCAACACAAACCC
TTCTTTCTAACTTCGCAGCTTCGTCGCAAGTCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTGGTTTTCGGTAAGCAATCAAGCAACGAGGATGAA
TCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAACC
ATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCACATGGTGGTACA
TCTTTCTTTACTCATACCCAAAGGCTTATTCTGATATGATTGCGGAGAGAAGAAGAAAGGTTAGTGATGGAGTCGAAGACACATTTGGAGTGAAAAGGACACAGTGA

mRNA sequence

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TGATGGGGTATGGCTCAGCCGGTGCATCGAATTTTGTGGGCCACGAAGTTTATCCTTTGCTAAGCTTACTGGAACTCCCCAATTCGGCAGCTCAGCTCCATGCCGCCATA
ATTAGCAGACTACTTGGAAGTGGCCGCCATACAAAACCCAAATCTATGGGAACTGTTTCTCTATTCCTCGCAACGTCCCTACGATCGCACCATTTTCCTTCAACACAAAC
CCTTCTTTCTAACTTCGCAGCTTCGTCGCAAGTCGTTTCGTTTACTCCCAAATGCACTAGATTCCGCCGGAAAAGCGTGGTTTTCGGTAAGCAATCAAGCAACGAGGATG
AATCTCAGTTTCTAGATGAAAATGGTGCCGTCAATGATATGGATGGATATTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTTCTTGGTGTCAA
CCATGGACTATAACACTGACAGGATCACTAGTAATTGCCTCTAGCTGGTTACTTATAAAGTCGATAGCAGTGACCGCAGTAGTACTCGCATTGATATGCACATGGTGGTA
CATCTTTCTTTACTCATACCCAAAGGCTTATTCTGATATGATTGCGGAGAGAAGAAGAAAGGTTAGTGATGGAGTCGAAGACACATTTGGAGTGAAAAGGACACAGTGAT
TACCGACTGCTTCTCTTCTTCTACGAGGCTTTTGCTGACTTCTCTGTGCTTTGTGCTCTATGATCTATAAAGAACTGTAAACGCAGGTGGTATGAGAAACATATAGCTAA
GCGAACCAAGTGTTTCTTCTTGAGACTCTTAAACCAATGCATAGTTTTTTTAAATTCTGTGATTTTAGATACTATTTTGGTTTTGATTCATTTTCGTTCGCAGACTTTCA
AAGTATTCGTTTTAGTCCTTTTACATTTATAAAGTGACTGTTATGATCTCTGATTGCCAACTTTTCCATAC

Protein sequence

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MGYGSAGASNFVGHEVYPLLSLLELPNSAAQLHAAIISRLLGSGRHTKPKSMGTVSLFLATSLRSHHFPSTQTLLSNFAASSQVVSFTPKCTRFRRKSVVFGKQSSNEDE
SQFLDENGAVNDMDGYLNYHSFEYDSVWDTKPSWCQPWTITLTGSLVIASSWLLIKSIAVTAVVLALICTWWYIFLYSYPKAYSDMIAERRRKVSDGVEDTFGVKRTQ

CmaCh19G000340 (gene) of Cucurbita maxima (Rimu) v1.1 genome