| GenBank top hits | e value | %identity | Alignment |
|---|
| CAB4269460.1 unnamed protein product [Prunus armeniaca] | 2.4e-179 | 88.11 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEP++WEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRR V + L ++ SN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
HFGMAYTSHILDQ+KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| CAB4274708.1 unnamed protein product [Prunus armeniaca] | 2.4e-179 | 88.11 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEP++WEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRR V + L ++ SN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
HFGMAYTSHILDQ+KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| CAB4299884.1 unnamed protein product [Prunus armeniaca] | 2.4e-179 | 88.11 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEP++WEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRR V + L ++ SN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
HFGMAYTSHILDQ+KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| CAB4320153.1 unnamed protein product [Prunus armeniaca] | 2.4e-179 | 88.11 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEP++WEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRR V + L ++ SN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
HFGMAYTSHILDQ+KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| KAF6151621.1 hypothetical protein GIB67_012980 [Kingdonia uniflora] | 1.4e-179 | 87.06 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF D+ EGKEGRFRET+LGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREK+PI+WEILQ+VMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRD------------------REKEVFQSLTQTSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLI
AIGDPI VPTQDML+GLYVLT GNRR+ R ++ +T SNLLSNPT RNMEVLMAERADLVFHNK IDGTA+KRLISRLI
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRD------------------REKEVFQSLTQTSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLI
Query: DHFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
DHFGMAYTSHILDQ+KTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: DHFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J5TZC9 DNA-directed RNA polymerase subunit | 1.1e-179 | 88.11 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEP++WEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRR V + L ++ SN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
HFGMAYTSHILDQ+KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| A0A6J5UKR1 DNA-directed RNA polymerase subunit | 1.1e-179 | 88.11 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEP++WEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRR V + L ++ SN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
HFGMAYTSHILDQ+KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| A0A6J5WKL9 DNA-directed RNA polymerase | 1.1e-179 | 88.11 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEP++WEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRR V + L ++ SN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
HFGMAYTSHILDQ+KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| A0A6J5Y6V4 DNA-directed RNA polymerase subunit | 1.1e-179 | 88.11 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEP++WEIL EVMQGHPVLLNRAPTLHRLGIQAFQPILVEG AICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
AIGDPISVPTQDMLIGLYVLTSGNRR V + L ++ SN LSNPTQRN EVLMAERA+LVFHNKVIDGTAIKRLI RLID
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR------DREKEVFQSLTQT-----------SNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLID
Query: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
HFGMAYTSHILDQ+KTLGF+QATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: HFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| A0A7J7M9Q4 DNA-directed RNA polymerase subunit | 6.7e-180 | 87.06 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF D+ EGKEGRFRET+LGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREK+PI+WEILQ+VMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRRD------------------REKEVFQSLTQTSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLI
AIGDPI VPTQDML+GLYVLT GNRR+ R ++ +T SNLLSNPT RNMEVLMAERADLVFHNK IDGTA+KRLISRLI
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRRD------------------REKEVFQSLTQTSNLLSNPTQRNMEVLMAERADLVFHNKVIDGTAIKRLISRLI
Query: DHFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
DHFGMAYTSHILDQ+KTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: DHFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| SwissProt top hits | e value | %identity | Alignment |
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| A6MM27 DNA-directed RNA polymerase subunit beta' | 1.3e-124 | 96.92 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPI+WEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR
AIGDPISVPTQDMLIGLYVLTSGNRR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR
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| A9LYH6 DNA-directed RNA polymerase subunit beta' | 6.5e-124 | 95.59 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIG+AKSKIREKEPI+WEILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR
AIGDPISVPTQDMLIGLYVLT GNRR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR
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| Q4VZP2 DNA-directed RNA polymerase subunit beta' | 2.4e-126 | 98.24 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPI+WEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR
SAIGDPISVPTQDMLIGLYVLTSGNRR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR
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| Q8HVY4 DNA-directed RNA polymerase subunit beta' | 2.9e-124 | 95.59 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF D+ EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIR+HFAS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIG+AKSKIREKEPI+WEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSH NLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR
AIGDPISVPTQDMLIGLY+LTSGNRR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR
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| Q8S8Y0 DNA-directed RNA polymerase subunit beta' | 3.8e-124 | 96.04 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKSKIREKEPI+WEILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQM VHVPLSLEAQ EARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR
AIGDPISVPTQDMLIGLYVLTSGNRR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G35800.1 RNA polymerase II large subunit | 1.3e-23 | 30.27 | Show/hide |
Query: KLVQEAVDTLLDNGIRGQP-MRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQTFLIRGLI-
+L+Q + T DN + GQP + KS C + KEGR R L+GKRVD+S R+VI P++++ G+P IA+ L + ++ L+
Subjt: KLVQEAVDTLLDNGIRGQP-MRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL--------FQTFLIRGLI-
Query: -RQHFASNIGVAKSKIREKEPII----------------WEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVH
H AK IR+ + +++ + + G VL NR P+LH++ I + ++ L+ V +NADFDGD+M +H
Subjt: -RQHFASNIGVAKSKIREKEPII----------------WEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVH
Query: VPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLYVLTSGNRRDR--EKEVFQS
VP S E +AE LM ++S P+ QD L+G +T +RD EK+VF +
Subjt: VPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDMLIGLYVLTSGNRRDR--EKEVFQS
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| AT5G60040.1 nuclear RNA polymerase C1 | 3.3e-22 | 31.88 | Show/hide |
Query: EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEPI
+GK GRFR L GKRV+++GR+VI P+L + G+P +A IE + + G + A N +G + +I ++ I
Subjt: EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEPI
Query: IWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDML
+ + + +G VL NR P+LHR+ I + ++ R + + VC +NADFDGD+M +HVP + EA+ EA LM NL + G+ + TQD L
Subjt: IWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDML
Query: IGLYVLT
+++T
Subjt: IGLYVLT
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| AT5G60040.2 nuclear RNA polymerase C1 | 3.3e-22 | 31.88 | Show/hide |
Query: EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEPI
+GK GRFR L GKRV+++GR+VI P+L + G+P +A IE + + G + A N +G + +I ++ I
Subjt: EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIA-------------IELFQTFLIRGLIRQHFASN-----------IGVAKSKIREKEPI
Query: IWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDML
+ + + +G VL NR P+LHR+ I + ++ R + + VC +NADFDGD+M +HVP + EA+ EA LM NL + G+ + TQD L
Subjt: IWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLSSAIGDPISVPTQDML
Query: IGLYVLT
+++T
Subjt: IGLYVLT
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| ATCG00170.1 DNA-directed RNA polymerase family protein | 7.1e-49 | 96.94 | Show/hide |
Query: MAERADLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
MAERA+LVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQ+KTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQS ILEKHHHYGNVHAVEKLR
Subjt: MAERADLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQIKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLR
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| ATCG00180.1 DNA-directed RNA polymerase family protein | 2.0e-123 | 94.71 | Show/hide |
Query: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSF DV EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQH AS
Subjt: MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFCDVTEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFAS
Query: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
NIGVAKS+IREK+PI+WEILQEVMQGHPVLLNRAPTLHRLGIQ+FQPILVEGR ICLHPLVCKGFNADFDGDQM VHVPLSLEAQAEARLLMFSHMNLLS
Subjt: NIGVAKSKIREKEPIIWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMVVHVPLSLEAQAEARLLMFSHMNLLS
Query: SAIGDPISVPTQDMLIGLYVLTSGNRR
AIGDPISVPTQDMLIGLYVLTSG RR
Subjt: SAIGDPISVPTQDMLIGLYVLTSGNRR
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