; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh19G006010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh19G006010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationCma_Chr19:6595273..6598692
RNA-Seq ExpressionCmaCh19G006010
SyntenyCmaCh19G006010
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011651.1 hypothetical protein SDJN02_26557 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-12887.46Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMS PVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSE-------------------SMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSE-------------------SMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHI

Query:  RNKTNSCQSARSSQQIPPCCRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
        RNKTNS QSARSSQQIPPCCRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  RNKTNSCQSARSSQQIPPCCRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]4.2e-13394.23Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
        CRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ

XP_022972372.1 uncharacterized protein LOC111470946 isoform X1 [Cucurbita maxima]1.5e-143100Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
        CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ

XP_022972373.1 uncharacterized protein LOC111470946 isoform X2 [Cucurbita maxima]4.0e-136100Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRV
        CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRV
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRV

XP_023553838.1 uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo]4.2e-13394.23Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLD+LEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        K+RRK IMPNISSSES+VLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAG   T ETTDVLEECGSCSDR HIRNKTNSCQSARSSQQIP C
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
        CRDSHTI  EVSDQNFVDTHPGELS GTPITKRLKKASSDS GNDRVKLGIAFDLSLENQ
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ

TrEMBL top hitse value%identityAlignment
A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X23.7e-12794.74Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRV
        CRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RV
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRV

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X12.0e-13394.23Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
        CRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ

A0A6J1I4M4 uncharacterized protein LOC111470946 isoform X17.4e-144100Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
        CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X22.0e-136100Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRV
        CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRV
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRV

A0A6J1IBB9 uncharacterized protein LOC111470946 isoform X39.8e-11285Show/hide
Query:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
        KMRRKPIMPNISSSE  V Q                                H  S  NQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPC

Query:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
        CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ
Subjt:  CRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 272.1e-1029.49Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMR--------RKPIMPNISSSESMVLQD
        R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L ++EASFV  L  Y  L A    + +         RKP     S  +  VL D
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMR--------RKPIMPNISSSESMVLQD

Query:  ASWQKANIGRTDPLLH--KTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQ--SARSSQQIPPCCRDSHTI---VAEVSDQ
          WQK N+ + +  ++     +S   L   WI H+      + P T +   +  S S+      K   C   SA S +Q+    RD   I    AEVSDQ
Subjt:  ASWQKANIGRTDPLLH--KTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQ--SARSSQQIPPCCRDSHTI---VAEVSDQ

Query:  NFVDTHPGELSGGTPITKRLKKA-SSDSLGNDRV
        NFV+     + G    +K++K    S+S   D+V
Subjt:  NFVDTHPGELSGGTPITKRLKKA-SSDSLGNDRV

Q8L983 Cold-regulated protein 282.2e-0430.47Show/hide
Query:  DRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNI--SS
        DR+ S + + S      S S  S  T + S  D          +LD   T WT+EKH  +LD LE+SFV+ L+    L    +++  R + +  N   S+
Subjt:  DRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNI--SS

Query:  SESMVLQDASWQKANIGRTDPLLHKTAD
         +  VLQ+  WQK N G+    L  +++
Subjt:  SESMVLQDASWQKANIGRTDPLLHKTAD

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)1.6e-0530.47Show/hide
Query:  DRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNI--SS
        DR+ S + + S      S S  S  T + S  D          +LD   T WT+EKH  +LD LE+SFV+ L+    L    +++  R + +  N   S+
Subjt:  DRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNI--SS

Query:  SESMVLQDASWQKANIGRTDPLLHKTAD
         +  VLQ+  WQK N G+    L  +++
Subjt:  SESMVLQDASWQKANIGRTDPLLHKTAD

AT4G33980.2 FUNCTIONS IN: molecular_function unknown1.6e-0530.47Show/hide
Query:  DRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNI--SS
        DR+ S + + S      S S  S  T + S  D          +LD   T WT+EKH  +LD LE+SFV+ L+    L    +++  R + +  N   S+
Subjt:  DRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNI--SS

Query:  SESMVLQDASWQKANIGRTDPLLHKTAD
         +  VLQ+  WQK N G+    L  +++
Subjt:  SESMVLQDASWQKANIGRTDPLLHKTAD

AT5G42900.1 cold regulated gene 271.5e-1129.49Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMR--------RKPIMPNISSSESMVLQD
        R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L ++EASFV  L  Y  L A    + +         RKP     S  +  VL D
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMR--------RKPIMPNISSSESMVLQD

Query:  ASWQKANIGRTDPLLH--KTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQ--SARSSQQIPPCCRDSHTI---VAEVSDQ
          WQK N+ + +  ++     +S   L   WI H+      + P T +   +  S S+      K   C   SA S +Q+    RD   I    AEVSDQ
Subjt:  ASWQKANIGRTDPLLH--KTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQ--SARSSQQIPPCCRDSHTI---VAEVSDQ

Query:  NFVDTHPGELSGGTPITKRLKKA-SSDSLGNDRV
        NFV+     + G    +K++K    S+S   D+V
Subjt:  NFVDTHPGELSGGTPITKRLKKA-SSDSLGNDRV

AT5G42900.2 cold regulated gene 271.5e-1129.49Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMR--------RKPIMPNISSSESMVLQD
        R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L ++EASFV  L  Y  L A    + +         RKP     S  +  VL D
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMR--------RKPIMPNISSSESMVLQD

Query:  ASWQKANIGRTDPLLH--KTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQ--SARSSQQIPPCCRDSHTI---VAEVSDQ
          WQK N+ + +  ++     +S   L   WI H+      + P T +   +  S S+      K   C   SA S +Q+    RD   I    AEVSDQ
Subjt:  ASWQKANIGRTDPLLH--KTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQ--SARSSQQIPPCCRDSHTI---VAEVSDQ

Query:  NFVDTHPGELSGGTPITKRLKKA-SSDSLGNDRV
        NFV+     + G    +K++K    S+S   D+V
Subjt:  NFVDTHPGELSGGTPITKRLKKA-SSDSLGNDRV

AT5G42900.3 cold regulated gene 273.3e-1129.18Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMR--------RKPIMPNISSSESMVLQD
        R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L ++EASFV  L  Y  L A    + +         RKP     S  +  VL D
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMR--------RKPIMPNISSSESMVLQD

Query:  ASWQKANIGRTDPLLH--KTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQ--SARSSQQIPPCCRDSHTIVA--EVSDQN
          WQK N+ + +  ++     +S   L   WI H+      + P T +   +  S S+      K   C   SA S +Q+    RD   I    EVSDQN
Subjt:  ASWQKANIGRTDPLLH--KTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQ--SARSSQQIPPCCRDSHTIVA--EVSDQN

Query:  FVDTHPGELSGGTPITKRLKKA-SSDSLGNDRV
        FV+     + G    +K++K    S+S   D+V
Subjt:  FVDTHPGELSGGTPITKRLKKA-SSDSLGNDRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCATCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTC
TTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGAT
TATTTCTTGATGCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTTTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAAT
ATATCTTCTTCAGAGTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACATTGGGAGAACTGATCCTTTATTGCATAAGACTGCCGATTCTCCCGCTATTTTAGA
GGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGCGTACTCCGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACA
AGACAAACTCCTGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTGCAGAAGTTTCAGATCAAAACTTTGTGGATACGCAT
CCAGGAGAGTTGTCTGGTGGCACGCCTATTACAAAAAGATTGAAGAAAGCTTCCTCTGATTCTTTAGGCAACGATCGGGTAAAACTCGGGATTGCCTTTGATCTCTCTTT
GGAGAACCAATAA
mRNA sequenceShow/hide mRNA sequence
TTCACCGAATCCCTCTCTATCTCTCTTCATATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCTTTTTTTTCTTTGATTTGATT
TTCTATATTTGGCTGCTCCGAACGATTTCGCTTTGTCTTTGATCCTTCCGAAATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCAT
CCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCAT
TGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATTATTTCTTGATGCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCT
TCGTGCTTTTTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACATTG
GGAGAACTGATCCTTTATTGCATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGCGTACTCCGGAAACTACT
GATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCTGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGA
TTCTCATACAATCGTTGCAGAAGTTTCAGATCAAAACTTTGTGGATACGCATCCAGGAGAGTTGTCTGGTGGCACGCCTATTACAAAAAGATTGAAGAAAGCTTCCTCTG
ATTCTTTAGGCAACGATCGGGTAAAACTCGGGATTGCCTTTGATCTCTCTTTGGAGAACCAATAATTGCATTTTACAAATGATCCAGGACCGAATATGCTGCTATTTGAT
CTCTCAGGTTGCACCATATAAAAGATTATCATCAGAAAGATAAAAGCCAGATGCAAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACTGTGTAAGAGGGAGCTGACA
ACAACTCATTCCAACATGTTAAAACACCCGGCTGTTCAAGCTCGTTAACCGAACGCGACACGATTCTGTTTTTCCTTTTGAAAGAGCATCAAAAAGTAAATAAGGGAAGT
GACAACAATAATTCTACCAGAAGATCTACGGCTGGAAGGAGAAAATACGTTTGTTTATGGTACAAACTAAACTTTTTCTTAGTTCATCAAATATAGAGTGAAATATATGT
TAACCCTTTCATTTCTCCTGCTTTTTTTCTTCTTTGAGTTTGAAGAAATGGAAATTCCAATAGATTTAGGGTATGAATATACATGATATAGAGAAAGCTAGACACCGACC
CTGATACTGAGATAGATATACACACCCTTTTTCATCTGTTTTGAAATACTCTCATTTTGAAGTTCAGGTAGAGACCTCAAATGTAAATTACTATTACATAAAACAATAGA
TTTGAACAGACTTATTGATTCTCTTTAGATGGAGCCTTTCTCTTGCTTATGGAGTATGTCGATGGCTAAGTGCTCGCTTGAGTAGTTGCTTTGTTCGAATGGTTATCATA
CGGGACTTAAGCTATTATATCTTTGCTTGCTTCGTTACGATCTTATATAAGCTATAATACGCAGATTCAATCATATTTCTTTAAAAAAACCATTGTTGGTTTTTTCTTAG
AAAATTTGTGATGATTGTTACTATTTTGTCC
Protein sequenceShow/hide protein sequence
MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPN
ISSSESMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPCCRDSHTIVAEVSDQNFVDTH
PGELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ