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CmaCh19G007750 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh19G007750
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily
Genome locationCma_Chr19:7593577..7593951
RNA-Seq ExpressionCmaCh19G007750
SyntenyCmaCh19G007750
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572149.1 putative pectinesterase/pectinesterase inhibitor 41, partial [Cucurbita argyrosperma subsp. sororia]6.2e-1569.23Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSK-KPLLKNCFSLQN
        T Y +   QFFKECDIYG +DFIF DGL  FQDCNIY RLPSNETTVT QSK KP +++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSK-KPLLKNCFSLQN

XP_022952377.1 probable pectinesterase/pectinesterase inhibitor 7 isoform X1 [Cucurbita moschata]5.8e-1360.94Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN
        T Y + + QFFK CDIYG +DFIF +GL  FQDCN+Y RLPSN++TVT QSKK   ++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN

XP_022952379.1 probable pectinesterase/pectinesterase inhibitor 7 isoform X2 [Cucurbita moschata]5.8e-1360.94Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN
        T Y + + QFFK CDIYG +DFIF +GL  FQDCN+Y RLPSN++TVT QSKK   ++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN

XP_022952380.1 probable pectinesterase/pectinesterase inhibitor 41 isoform X3 [Cucurbita moschata]5.8e-1360.94Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN
        T Y + + QFFK CDIYG +DFIF +GL  FQDCN+Y RLPSN++TVT QSKK   ++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN

XP_023554542.1 probable pectinesterase/pectinesterase inhibitor 41 isoform X2 [Cucurbita pepo subsp. pepo]5.8e-1360.94Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN
        T Y + + QFFK CDIYG +DFIF +GL  FQDCN+Y RLPSN++TVT QSKK   ++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN

TrEMBL top hitse value%identityAlignment
A0A6J1GK92 Pectinesterase2.8e-1360.94Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN
        T Y + + QFFK CDIYG +DFIF +GL  FQDCN+Y RLPSN++TVT QSKK   ++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN

A0A6J1GLJ0 Pectinesterase2.8e-1360.94Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN
        T Y + + QFFK CDIYG +DFIF +GL  FQDCN+Y RLPSN++TVT QSKK   ++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN

A0A6J1GLL3 Pectinesterase2.8e-1360.94Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN
        T Y + + QFFK CDIYG +DFIF +GL  FQDCN+Y RLPSN++TVT QSKK   ++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKNCFSLQN

A0A6J1GMM0 Pectinesterase6.9e-1261.54Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSK-KPLLKNCFSLQN
        T Y++   QFF+ECDIYG +DFIF +GL  FQDCNIY RL SNE TVT QSK +  +K+ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSK-KPLLKNCFSLQN

A0A6J1HZD2 Pectinesterase1.5e-1158.46Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSK-KPLLKNCFSLQN
        T Y + + QFF+ECDIYG +DFIF +GL  FQDCNIY RLP +E TVT QSK + + ++ FS QN
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSK-KPLLKNCFSLQN

SwissProt top hitse value%identityAlignment
O04887 Pectinesterase 24.4e-0849.06Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNET-TVTTQSK
        T Y+    QF++ECDIYG +DFIF +  V  Q+CNI+ R P N T T+T Q +
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNET-TVTTQSK

O22149 Probable pectinesterase/pectinesterase inhibitor 174.9e-0741.51Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNET-TVTTQSK
        T Y+  + QF+++CD+YG +DFIF +     Q+CNI+ R P ++T T+T Q +
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNET-TVTTQSK

O81301 Probable pectinesterase/pectinesterase inhibitor 402.9e-0752.38Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPS
        T Y+    QF++ECDIYG +DFIF D  V FQ+C++Y R P+
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPS

Q9FK05 Probable pectinesterase/pectinesterase inhibitor 619.9e-0847.17Show/hide
Query:  YIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLP--SNETTVTTQSKK
        Y+  + QFF+EC+IYG +DFIF +  V  Q CNIY R P    + T+T Q++K
Subjt:  YIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLP--SNETTVTTQSKK

Q9M3B0 Probable pectinesterase/pectinesterase inhibitor 343.4e-0847.27Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSN--ETTVTTQSKK
        T Y+  + QFF+ECDIYG +DFIF +  V  Q+C+IY R P +  + T+T Q++K
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSN--ETTVTTQSKK

Arabidopsis top hitse value%identityAlignment
AT1G23200.1 Plant invertase/pectin methylesterase inhibitor superfamily3.5e-0845.45Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLP--SNETTVTTQSKK
        T Y+    QF + C+IYG +DFIF D     Q+CNIY R P    + T+T QS+K
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLP--SNETTVTTQSKK

AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily3.5e-0841.51Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNET-TVTTQSK
        T Y+  + QF+++CD+YG +DFIF +     Q+CNI+ R P ++T T+T Q +
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNET-TVTTQSK

AT3G49220.1 Plant invertase/pectin methylesterase inhibitor superfamily2.4e-0947.27Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSN--ETTVTTQSKK
        T Y+  + QFF+ECDIYG +DFIF +  V  Q+C+IY R P +  + T+T Q++K
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSN--ETTVTTQSKK

AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily2.0e-0852.38Show/hide
Query:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPS
        T Y+    QF++ECDIYG +DFIF D  V FQ+C++Y R P+
Subjt:  TPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPS

AT5G53370.1 pectin methylesterase PCR fragment F7.0e-0947.17Show/hide
Query:  YIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLP--SNETTVTTQSKK
        Y+  + QFF+EC+IYG +DFIF +  V  Q CNIY R P    + T+T Q++K
Subjt:  YIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLP--SNETTVTTQSKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGAAGGATAGATTTTACAAGGTGACAACTTTATGGCCCAACATTCAAGTTTTGAAAATTCTATCGAACATCAAAACGGTCAAGCAGTTGCTGTCTTTGACGAT
GCGGACTCTACTTTCTATTACAAGTGTAGGTTCCTTAATTTCCAAGACACCTTATATTCAAAGGGACGACCAGTTTTTTAAGGAGTGCGACATCTATGGAAATATAGACT
TTATTTTTAGAGATGGACTTGTTACGTTTCAAGACTGTAACATATATATTCGGTTACCGAGCAATGAAACCACAGTCACGACGCAGTCCAAGAAACCTTTGTTGAAAAAC
TGCTTCTCATTACAAAACCAAATATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGAAGGATAGATTTTACAAGGTGACAACTTTATGGCCCAACATTCAAGTTTTGAAAATTCTATCGAACATCAAAACGGTCAAGCAGTTGCTGTCTTTGACGAT
GCGGACTCTACTTTCTATTACAAGTGTAGGTTCCTTAATTTCCAAGACACCTTATATTCAAAGGGACGACCAGTTTTTTAAGGAGTGCGACATCTATGGAAATATAGACT
TTATTTTTAGAGATGGACTTGTTACGTTTCAAGACTGTAACATATATATTCGGTTACCGAGCAATGAAACCACAGTCACGACGCAGTCCAAGAAACCTTTGTTGAAAAAC
TGCTTCTCATTACAAAACCAAATATCATAA
Protein sequenceShow/hide protein sequence
MKKKDRFYKVTTLWPNIQVLKILSNIKTVKQLLSLTMRTLLSITSVGSLISKTPYIQRDDQFFKECDIYGNIDFIFRDGLVTFQDCNIYIRLPSNETTVTTQSKKPLLKN
CFSLQNQIS