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CmaCh19G010010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh19G010010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionE3 ubiquitin-protein ligase RNF12 isoform X1
Genome locationCma_Chr19:8662978..8665591
RNA-Seq ExpressionCmaCh19G010010
SyntenyCmaCh19G010010
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031548.1 E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo var. makuwa]2.0e-2082.09Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYREIDPVPWRPA ETMI RILDIGS PEEP AIVRIIT+ RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

TYK07001.1 E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo var. makuwa]2.0e-2082.09Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYREIDPVPWRPA ETMI RILDIGS PEEP AIVRIIT+ RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

XP_004136838.1 E3 ubiquitin-protein ligase AIRP1 [Cucumis sativus]1.0e-1979.1Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYR+IDPVPWRPA ET+I RILDIGS PEEP AIVRIIT+ RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

XP_008455285.1 PREDICTED: E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo]2.0e-2082.09Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYREIDPVPWRPA ETMI RILDIGS PEEP AIVRIIT+ RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

XP_038888228.1 uncharacterized protein LOC120078088 isoform X1 [Benincasa hispida]7.8e-2080.6Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYRE+DPVPWRPA ETMIARILDIG P EEP AIVRIIT  RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

TrEMBL top hitse value%identityAlignment
A0A0A0K1V1 RING-type domain-containing protein4.9e-2079.1Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYR+IDPVPWRPA ET+I RILDIGS PEEP AIVRIIT+ RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

A0A1S3C054 E3 ubiquitin-protein ligase RNF12 isoform X19.9e-2182.09Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYREIDPVPWRPA ETMI RILDIGS PEEP AIVRIIT+ RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

A0A5A7SLQ9 E3 ubiquitin-protein ligase RNF12 isoform X19.9e-2182.09Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYREIDPVPWRPA ETMI RILDIGS PEEP AIVRIIT+ RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

A0A5D3C526 E3 ubiquitin-protein ligase RNF12 isoform X19.9e-2182.09Show/hide
Query:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        QNSYREIDPVPWRPA ETMI RILDIGS PEEP AIVRIIT+ RPRQ EASP  AE+  PTPRSEGN
Subjt:  QNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

A0A6J1D2C6 E3 ubiquitin-protein ligase RNF12-B-like isoform X21.1e-1972.86Show/hide
Query:  MCCQNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN
        MCCQNSY E DP PWRPA E M ARILDIGSPPEE   IVRIIT+ RP Q E+SPR AE+  PTPRS+GN
Subjt:  MCCQNSYREIDPVPWRPARETMIARILDIGSPPEEPHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACAACAGTTGAATACTGTCTCCATGGCCAATCAAGATACATTTTGACTTCGGCCTTTCTGGAAGCTATTTTCAGAGAAACTGTGACGATTAAAGAAGCAGCTTC
TGAAAAACGAGCAGATGTTCGACTAATTTTCCTCCAGGAATTTGGCAGGCTAGAAAGGAATATGATCACCAAAGATATAACAGAAATGATTCATTTCAGCTCATGCTCGT
TGTTCATGTGCTGCCAGAATTCTTATAGAGAGATAGATCCAGTTCCATGGCGGCCTGCTAGGGAGACAATGATTGCAAGAATATTGGACATCGGCAGCCCTCCAGAAGAA
CCACATGCAATAGTTAGAATCATCACATACCTCAGACCGAGACAGCACGAGGCCAGTCCAAGAGCTGCGGAGATGTGCTTGCCAACTCCAAGATCCGAAGGGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACAACAGTTGAATACTGTCTCCATGGCCAATCAAGATACATTTTGACTTCGGCCTTTCTGGAAGCTATTTTCAGAGAAACTGTGACGATTAAAGAAGCAGCTTC
TGAAAAACGAGCAGATGTTCGACTAATTTTCCTCCAGGAATTTGGCAGGCTAGAAAGGAATATGATCACCAAAGATATAACAGAAATGATTCATTTCAGCTCATGCTCGT
TGTTCATGTGCTGCCAGAATTCTTATAGAGAGATAGATCCAGTTCCATGGCGGCCTGCTAGGGAGACAATGATTGCAAGAATATTGGACATCGGCAGCCCTCCAGAAGAA
CCACATGCAATAGTTAGAATCATCACATACCTCAGACCGAGACAGCACGAGGCCAGTCCAAGAGCTGCGGAGATGTGCTTGCCAACTCCAAGATCCGAAGGGAACTGA
Protein sequenceShow/hide protein sequence
MNTTVEYCLHGQSRYILTSAFLEAIFRETVTIKEAASEKRADVRLIFLQEFGRLERNMITKDITEMIHFSSCSLFMCCQNSYREIDPVPWRPARETMIARILDIGSPPEE
PHAIVRIITYLRPRQHEASPRAAEMCLPTPRSEGN