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CmaCh19G010380 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh19G010380
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr19:8815631..8815909
RNA-Seq ExpressionCmaCh19G010380
SyntenyCmaCh19G010380
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039617 - CLAVATA3/ESR (CLE)-related protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061638.1 hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa]1.4e-1968.89Show/hide
Query:  RFNPKFAPLMGVLFMVMLVTAAAGRHAVPLR---TEAAAIEGGSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSPRLP
        R N   APLM VLFMVMLVTAAA RHA  L     EA      S +MIMR+ GY+K QMEHLRRL SSSTARYIPGGPDSQHHS+ PRLP
Subjt:  RFNPKFAPLMGVLFMVMLVTAAAGRHAVPLR---TEAAAIEGGSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSPRLP
KAE8647339.1 hypothetical protein Csa_003556, partial [Cucumis sativus]1.6e-1563.64Show/hide
Query:  RFNPKFA-PLMGVLFMVMLVTAAAGRHAVPLR---TEAAAIEGGSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSP
        RFN   A PLM VLFM MLVTAA   HA  L     EA      SS+M+MR+ GY+K QMEHLRRL SSST RYIPGGPDSQHHS+ P
Subjt:  RFNPKFA-PLMGVLFMVMLVTAAAGRHAVPLR---TEAAAIEGGSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSP
KAG6572409.1 hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3687Show/hide
Query:  MAATHHRFNPKFAPLMGVLFMVMLVTAAAGRHAVPLRT-EAAAIEGG-------SSSMIMRRLGYTKSQMEHLRRLSSSTARYIPGGPDSQHHSRSPRLP
        MAATHHRFNPKFAPL  V+FMVMLVTAAAGRHA+PLRT EAAAIEGG       SSSMIMRRLGYTKSQMEHLRRLSSSTARYIPGGPDSQHHSRSPR P
Subjt:  MAATHHRFNPKFAPLMGVLFMVMLVTAAAGRHAVPLRT-EAAAIEGG-------SSSMIMRRLGYTKSQMEHLRRLSSSTARYIPGGPDSQHHSRSPRLP
KAG6589262.1 hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2063.95Show/hide
Query:  RFNPKFAPLMGVLFMVMLVTAAAGRHAVPLRTEAAAIEGGSSSMIMRRLGYTKSQMEHLRRLSSSTARYIPGGPDSQHHSRSPRLP
        RF+ K AP M VLF+ ML+   AGRHA P  T     E  SS MIMR+ GY+K+QMEHL+RLSSST RY PGGPDSQHHS  PRLP
Subjt:  RFNPKFAPLMGVLFMVMLVTAAAGRHAVPLRTEAAAIEGGSSSMIMRRLGYTKSQMEHLRRLSSSTARYIPGGPDSQHHSRSPRLP
TrEMBL top hitse value%identityAlignment
A0A0A0KGI4 Uncharacterized protein1.1e-1764.84Show/hide
Query:  RFNPKFA-PLMGVLFMVMLVTAAAGRHAVPLR---TEAAAIEGGSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSPRLP
        RFN   A PLM VLFM MLVTAA   HA  L     EA      SS+M+MR+ GY+K QMEHLRRL SSST RYIPGGPDSQHHS+ PRLP
Subjt:  RFNPKFA-PLMGVLFMVMLVTAAAGRHAVPLR---TEAAAIEGGSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSPRLP
A0A5D3C664 Uncharacterized protein6.9e-2068.89Show/hide
Query:  RFNPKFAPLMGVLFMVMLVTAAAGRHAVPLR---TEAAAIEGGSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSPRLP
        R N   APLM VLFMVMLVTAAA RHA  L     EA      S +MIMR+ GY+K QMEHLRRL SSSTARYIPGGPDSQHHS+ PRLP
Subjt:  RFNPKFAPLMGVLFMVMLVTAAAGRHAVPLR---TEAAAIEGGSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSPRLP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACCCATCACCGTTTCAACCCAAAATTTGCTCCATTAATGGGCGTTCTTTTCATGGTGATGCTTGTCACTGCGGCGGCCGGCCGCCATGCAGTGCCG
CTGAGGACGGAGGCGGCGGCCATTGAAGGTGGCAGCAGCAGCATGATAATGCGTAGGTTGGGTTATACCAAAAGCCAAATGGAGCATTTAAGAAGGCTTTCTTCT
TCCACTGCAAGATACATACCTGGAGGGCCTGATTCTCAACATCATTCTCGATCACCTCGTTTACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACCCATCACCGTTTCAACCCAAAATTTGCTCCATTAATGGGCGTTCTTTTCATGGTGATGCTTGTCACTGCGGCGGCCGGCCGCCATGCAGTGCCG
CTGAGGACGGAGGCGGCGGCCATTGAAGGTGGCAGCAGCAGCATGATAATGCGTAGGTTGGGTTATACCAAAAGCCAAATGGAGCATTTAAGAAGGCTTTCTTCT
TCCACTGCAAGATACATACCTGGAGGGCCTGATTCTCAACATCATTCTCGATCACCTCGTTTACCGTAG
Protein sequenceShow/hide protein sequence
MAATHHRFNPKFAPLMGVLFMVMLVTAAAGRHAVPLRTEAAAIEGGSSSMIMRRLGYTKSQMEHLRRLSSSTARYIPGGPDSQHHSRSPRLP