; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh20G005690 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh20G005690
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationCma_Chr20:2738595..2742391
RNA-Seq ExpressionCmaCh20G005690
SyntenyCmaCh20G005690
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]1.5e-13598.41Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSV+PQYGKHGGSHGNG RHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRP KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH

XP_022943536.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita moschata]3.3e-13598.41Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+PSVIPQYGKHGGSHGNG RHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRP KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH

XP_022943539.1 nuclear cap-binding protein subunit 2-like isoform X2 [Cucurbita moschata]1.3e-13698.8Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+PSVIPQYGKHGGSHGNG RHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]2.7e-13799.6Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRP KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH

XP_022986368.1 nuclear cap-binding protein subunit 2-like isoform X2 [Cucurbita maxima]1.1e-138100Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH

TrEMBL top hitse value%identityAlignment
A0A1S3CLT9 Nuclear cap-binding protein subunit 22.5e-12893.23Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+ QYGKHGGSHG+GHRHGRDYH+RKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH

A0A6J1FUM2 Nuclear cap-binding protein subunit 26.5e-13798.8Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+PSVIPQYGKHGGSHGNG RHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH

A0A6J1FX36 Nuclear cap-binding protein subunit 21.6e-13598.41Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+PSVIPQYGKHGGSHGNG RHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRP KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 21.3e-13799.6Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRP KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQRH

A0A6J1JFW0 Nuclear cap-binding protein subunit 25.3e-139100Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
        DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRD

Query:  DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 25.6e-5369.5Show/hide
Query:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCF  YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

B7P877 Nuclear cap-binding protein subunit 22.5e-5367.38Show/hide
Query:  LSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADFD
        LS YRD+ F+G++ E E  L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCF  YY+RED E+A++Y++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADFD

Query:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL
         GF +GRQ+GRG+SGGQVRDEYRTDYD GRGGYGKL+ + +
Subjt:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL

Q84L14 Nuclear cap-binding protein subunit 24.2e-9373.31Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS YRDRRF GTQ+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF LYYSRED EDAVKYISGT+L
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQY--GKHGGSHGNGHRHGRDYHNRKRY
        DDRPIR DFDWGF++GRQWGRGRSGGQVRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG       P+  PQY  G     +G+ +R+ RDY  RKRY
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQY--GKHGGSHGNGHRHGRDYHNRKRY

Query:  RDDDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQR
        R+D+R    SS+R  D + +R  D     KNPRFRE GDSDEEDDD  K+R
Subjt:  RDDDRHAHESSKRTSDYDSRRNPDHESRPKNPRFRESGDSDEEDDDDRKQR

Q9CQ49 Nuclear cap-binding protein subunit 25.6e-5369.5Show/hide
Query:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCF  YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 24.5e-10375.39Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF L+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIP-QYG---KHGGSHGNG--HRHGRDYHN
        DDRPIR DFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG++G G  +RHGR  ++
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIP-QYG---KHGGSHGNG--HRHGRDYHN

Query:  RKRYRDDDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D++SRR+ D + RP KNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.3e-0831.65Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRAD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G    +Y  R D   A++  +  +LD RP++ +
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRAD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.3e-0831.65Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRAD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G    +Y  R D   A++  +  +LD RP++ +
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRAD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.3e-0834.62Show/hide
Query:  LALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPI
        +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F  + S +D   A+K + G I+D R I
Subjt:  LALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPI

AT5G44200.1 CAP-binding protein 203.2e-10475.39Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF L+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIP-QYG---KHGGSHGNG--HRHGRDYHN
        DDRPIR DFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG++G G  +RHGR  ++
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIP-QYG---KHGGSHGNG--HRHGRDYHN

Query:  RKRYRDDDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D++SRR+ D + RP KNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 203.2e-10475.39Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF L+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTIL

Query:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIP-QYG---KHGGSHGNG--HRHGRDYHN
        DDRPIR DFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG++G G  +RHGR  ++
Subjt:  DDRPIRADFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIP-QYG---KHGGSHGNG--HRHGRDYHN

Query:  RKRYRDDDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D++SRR+ D + RP KNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYDSRRNPDHESRP-KNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTTGTTCAAGGACCCATCAAAGCTATCTGTATACCGGGATAGAAGATTTCAGGGAACACAAGATGAATTTGAACTGGCTCTTCAGACTTCAACCACCGTTTA
CGTGGGAAATATGTCCTTTTATACAACAGAAGAGCAAGTTTATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACAC
CTTGTGGCTTTTGTTTTGCCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGGCCCATCCGTGCGGATTTTGAT
TGGGGATTTCAGGATGGCAGGCAATGGGGTCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAGTTAGT
TCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTACGGTACTGGTTCACTAGGCTCTATGCCGTCAGTCATACCCCAGTACGGTAAACATGGTGGAAGCCACGGAA
ATGGGCATCGTCATGGAAGAGATTACCACAATCGTAAGCGCTACCGAGATGATGATCGGCATGCTCATGAAAGCTCCAAGAGAACTTCAGATTATGACTCTAGAAGAAAT
CCTGATCATGAATCAAGACCGAAAAATCCAAGGTTCCGGGAGAGTGGAGATTCTGATGAAGAGGACGACGATGACCGAAAACAGCGACACTAA
mRNA sequenceShow/hide mRNA sequence
TGCTAACGCAGCGCGGGGGAAGAAGTGCACGAGCAGAATTGGGCGACTGAACTCACCGAACGAGTTCTCCAGTTCTTAAGCTAAATCCAACCCGAAATTTACCTGCTAAT
TTGATTTGAAGCGGCTCTAATCTGTGCTTTACTTCTTCCTTTTCCCCTTTTGTTTCTCGCATTGGCTGATTATATTATCGCCCAAATTCCCAACACCTGATAGAGACGAT
TTCATTTTGAACCTTTGGTTCGTTGAGTGTCTGCTAGCTACTTCAGCTAAAGTGGTTTTTTCGAGTTTTGTTGCAGATTTTGTTCTTCTAGGGTTCATGGCTTCGTTGTT
CAAGGACCCATCAAAGCTATCTGTATACCGGGATAGAAGATTTCAGGGAACACAAGATGAATTTGAACTGGCTCTTCAGACTTCAACCACCGTTTACGTGGGAAATATGT
CCTTTTATACAACAGAAGAGCAAGTTTATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGCTTTTGT
TTTGCCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGGCCCATCCGTGCGGATTTTGATTGGGGATTTCAGGA
TGGCAGGCAATGGGGTCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAGTTAGTTCAGAAAGAGTTGG
AAGCACAGAGGCAGCTTGTGGATTACGGTACTGGTTCACTAGGCTCTATGCCGTCAGTCATACCCCAGTACGGTAAACATGGTGGAAGCCACGGAAATGGGCATCGTCAT
GGAAGAGATTACCACAATCGTAAGCGCTACCGAGATGATGATCGGCATGCTCATGAAAGCTCCAAGAGAACTTCAGATTATGACTCTAGAAGAAATCCTGATCATGAATC
AAGACCGAAAAATCCAAGGTTCCGGGAGAGTGGAGATTCTGATGAAGAGGACGACGATGACCGAAAACAGCGACACTAA
Protein sequenceShow/hide protein sequence
MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADFD
WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGGSHGNGHRHGRDYHNRKRYRDDDRHAHESSKRTSDYDSRRN
PDHESRPKNPRFRESGDSDEEDDDDRKQRH