; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh20G006080 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh20G006080
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionDihydrolipoyllysine-residue succinyltransferase
Genome locationCma_Chr20:2840055..2843387
RNA-Seq ExpressionCmaCh20G006080
SyntenyCmaCh20G006080
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010740.1 hypothetical protein SDJN02_27536, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-3351.44Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGR
        MLLFP  HFF     C++                         L   DSQRTRLVYQRQRQQRLQR                                  
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGR

Query:  SGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQL
              R NWCQLTAEEGETSKPSTRIATISKSGE VAQDA FEK         + +  KK+  K+   SRAKQRTVSLKINCKNTFSSSETHTAQEPQL
Subjt:  SGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQL

Query:  PPKDGKNE
        PPKDGKNE
Subjt:  PPKDGKNE

XP_022986385.1 uncharacterized protein LOC111484139 isoform X1 [Cucurbita maxima]4.9e-5564.11Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG
        MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ +        V  +    +K+  Q    Y + +  + F +  G
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG

Query:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ
                 NWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ
Subjt:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ

Query:  LPPKDGKNE
        LPPKDGKNE
Subjt:  LPPKDGKNE

XP_022986388.1 uncharacterized protein LOC111484139 isoform X2 [Cucurbita maxima]7.3e-5964.95Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG
        MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ +        V  +    +K+  Q    Y + +  + F +  G
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG

Query:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ
                 NWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ
Subjt:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ

Query:  LPPKDGKNEFLCRD
        LPPKDGKNEFLCRD
Subjt:  LPPKDGKNEFLCRD

XP_022986390.1 uncharacterized protein LOC111484139 isoform X4 [Cucurbita maxima]1.7e-6069.23Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGR
        MLLFPFVHFFLVIALCSMHSIHLLC                       SQRTRLVYQRQRQQRLQR                                  
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGR

Query:  SGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQL
              R NWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQL
Subjt:  SGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQL

Query:  PPKDGKNE
        PPKDGKNE
Subjt:  PPKDGKNE

XP_023512503.1 uncharacterized protein LOC111777232 isoform X2 [Cucurbita pepo subsp. pepo]2.5e-2248.57Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGR
        MLLFPF HFF   + C++                         L   DSQRTRLVYQRQRQQRLQRR S                               
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGR

Query:  SGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQR
                 WCQLTAEEGET+KP TRIATIS SGE VAQDA FEKVELQTA PKQREN KKEIPKEAS  + K +
Subjt:  SGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQR

TrEMBL top hitse value%identityAlignment
A0A5C7HGQ0 Dihydrolipoyllysine-residue succinyltransferase3.8e-0541.94Show/hide
Query:  QLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKD
        QL A+EGET +P T+IA ISKS E  AQ A  EK   Q    +++E+ +K+IPK  +  R   +  + K     + + S    A EPQLPPKD
Subjt:  QLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKD

A0A6J1JAY5 uncharacterized protein LOC111484139 isoform X12.4e-5564.11Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG
        MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ +        V  +    +K+  Q    Y + +  + F +  G
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG

Query:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ
                 NWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ
Subjt:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ

Query:  LPPKDGKNE
        LPPKDGKNE
Subjt:  LPPKDGKNE

A0A6J1JDX8 uncharacterized protein LOC111484139 isoform X48.4e-6169.23Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGR
        MLLFPFVHFFLVIALCSMHSIHLLC                       SQRTRLVYQRQRQQRLQR                                  
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGR

Query:  SGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQL
              R NWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQL
Subjt:  SGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQL

Query:  PPKDGKNE
        PPKDGKNE
Subjt:  PPKDGKNE

A0A6J1JFX9 uncharacterized protein LOC111484139 isoform X38.0e-1943.5Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG
        MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ +        V  +    +K+  Q    Y + +  + F +  G
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG

Query:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRT
                 NWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEK + +  L + +            CSRA   T
Subjt:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRT

A0A6J1JGC9 uncharacterized protein LOC111484139 isoform X23.5e-5964.95Show/hide
Query:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG
        MLLFPFVHFFLVIALCSMHSIHLLCR             + S+  +  S      ++ +        V  +    +K+  Q    Y + +  + F +  G
Subjt:  MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHL-TMVKFFVFPQG

Query:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ
                 NWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ
Subjt:  RSGRESKRCNWCQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQ

Query:  LPPKDGKNEFLCRD
        LPPKDGKNEFLCRD
Subjt:  LPPKDGKNEFLCRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTCTTCCCTTTCGTACATTTCTTTCTAGTTATTGCGCTGTGCTCGATGCATTCGATTCACTTGCTCTGCAGGTCAGATTTAAGGTGCGAACGAAATGAGTTTGC
ATTCACCGTATCGTCGCTTCTGCATTATGACGATAGTCAGCGTACAAGGTTGGTCTACCAGCGTCAGCGACAACAAAGGCTTCAAAGAAGAGTTTCGAAGTTGATGAGCC
CATTTCTCAAATCGAGGCGACAAGGCTCTTTATTGTACCACTTGACTATGGTGAAGTTTTTCGTATTCCCACAAGGTCGCAGTGGACGTGAATCCAAAAGATGCAATTGG
TGTCAGTTAACTGCCGAGGAAGGTGAAACTTCGAAACCAAGCACAAGGATTGCTACTATTTCGAAATCGGGTGAATGGGTAGCTCAAGATGCTCAATTCGAAAAGGTTGA
ACTTCAGACAGCACTTCCAAAGCAGAGGGAAAATTATAAAAAAGAAATCCCTAAAGAAGCTTCATGTTCCAGGGCAAAACAAAGAACCGTCTCTCTCAAAATCAACTGCA
AAAACACCTTCTCTTCCTCGGAAACCCACACTGCTCAAGAGCCCCAGCTTCCACCCAAGGACGGGAAAAATGAATTCCTATGTCGAGACTAA
mRNA sequenceShow/hide mRNA sequence
TCTCTGGTTTTTGAGTTGGATATAAATGCTTCTCTTCCCTTTCGTACATTTCTTTCTAGTTATTGCGCTGTGCTCGATGCATTCGATTCACTTGCTCTGCAGGTCAGATT
TAAGGTGCGAACGAAATGAGTTTGCATTCACCGTATCGTCGCTTCTGCATTATGACGATAGTCAGCGTACAAGGTTGGTCTACCAGCGTCAGCGACAACAAAGGCTTCAA
AGAAGAGTTTCGAAGTTGATGAGCCCATTTCTCAAATCGAGGCGACAAGGCTCTTTATTGTACCACTTGACTATGGTGAAGTTTTTCGTATTCCCACAAGGTCGCAGTGG
ACGTGAATCCAAAAGATGCAATTGGTGTCAGTTAACTGCCGAGGAAGGTGAAACTTCGAAACCAAGCACAAGGATTGCTACTATTTCGAAATCGGGTGAATGGGTAGCTC
AAGATGCTCAATTCGAAAAGGTTGAACTTCAGACAGCACTTCCAAAGCAGAGGGAAAATTATAAAAAAGAAATCCCTAAAGAAGCTTCATGTTCCAGGGCAAAACAAAGA
ACCGTCTCTCTCAAAATCAACTGCAAAAACACCTTCTCTTCCTCGGAAACCCACACTGCTCAAGAGCCCCAGCTTCCACCCAAGGACGGGAAAAATGAATTCCTATGTCG
AGACTAAAAAAACATGTCGCAACTCGCTTGAGGGATTCATAATACCTAGATATAACATTTCATGCTCCAGGACCATCATGATGAAGTTCTGATCTGATTATAAAGACGAT
TTTGTCGAAAAACATGCGGTGAAATTAAGATTTATGTCAGCGTTTGAAACAGGGAGTACCAAGGTCTTGTTTTGTTGTGGTACCCGTCAATCGCAATGCTGAAACAATGA
ACTTTGCTGAGATAGAGAAAGAGATCAATGTTTTGTTCGCATATCCATCGAGGTCGTGACTTCAATGCTACGCCATCCATCTTTAATAGGTAATTCGCTCTCTTGATATA
TGTTCAGAAATTTCAGTAAAACATAGACGGAATGATCTTGGGGAATCAGTGGGTGGCACGTGAAACAAAATTTACAACCTTAGAGGTGCATAAAAGGATATAGCTGTACA
TTAATTAAAGAAATATATATTTTAACAATACCAGGATATTTTTTAGCCTAATTTTTTACTAGACTATTAATGAATTGAAGGAAGATAAAAGTAAAAAGTGTTATAATGAC
AAAGCACTCTGTATTACCCGCATGCACAGCTGCCCATTGGCGGTGAGTAGGGATTTACCAGGGATTTACGGATAACTTCCATAATTATAGAGATTGAATTTGGTTTGGAT
TAGCATCGTG
Protein sequenceShow/hide protein sequence
MLLFPFVHFFLVIALCSMHSIHLLCRSDLRCERNEFAFTVSSLLHYDDSQRTRLVYQRQRQQRLQRRVSKLMSPFLKSRRQGSLLYHLTMVKFFVFPQGRSGRESKRCNW
CQLTAEEGETSKPSTRIATISKSGEWVAQDAQFEKVELQTALPKQRENYKKEIPKEASCSRAKQRTVSLKINCKNTFSSSETHTAQEPQLPPKDGKNEFLCRD