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CmaCh20G007710 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh20G007710
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr20:3652957..3653244
RNA-Seq ExpressionCmaCh20G007710
SyntenyCmaCh20G007710
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045689.1 hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa]1.1e-4390.62Show/hide
Query:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRG-AW
        MTYCYGCKPR SGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCLSS+DSS RYYACPCNRGWKM CRCG G AW
Subjt:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRG-AW

KAG6571042.1 hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]7.5e-4897.89Show/hide
Query:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRGAW
        MTYCYGCKPR SGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLS+VDSSSRYYACPCNRGWKMQCRCGRGAW
Subjt:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRGAW

KAG6605007.1 hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3682.11Show/hide
Query:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRGAW
        MTYCYG KP  SGPLPGP+L+LL VVFILIGLSSLF SEPIDFSEFQINWPLLAVPII+LVLVR LSSVDSSSR+  C C+RGWKM CRC  GAW
Subjt:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRGAW

KGN61893.1 hypothetical protein Csa_006600 [Cucumis sativus]2.5e-4389.58Show/hide
Query:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRG-AW
        MTYCYGCKPR SGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCL+S+DSS RYYACPC+RGWKM CRCGRG AW
Subjt:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRG-AW

PKI78722.1 hypothetical protein CRG98_000947 [Punica granatum]4.3e-1145.65Show/hide
Query:  YCYGCK--PRASGPLPGPVLLLLAVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYA-CPCNRGWKMQCRC
        YCY CK  P + GP+P  VLL L +  I I LS L   + + +  E  INW LLAVPI++L +V  LSS+D   ++Y   PC R WK  C C
Subjt:  YCYGCK--PRASGPLPGPVLLLLAVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYA-CPCNRGWKMQCRC

TrEMBL top hitse value%identityAlignment
A0A0A0LJB6 Uncharacterized protein1.2e-4389.58Show/hide
Query:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRG-AW
        MTYCYGCKPR SGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCL+S+DSS RYYACPC+RGWKM CRCGRG AW
Subjt:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRG-AW

A0A2I0LDH6 Uncharacterized protein2.1e-1145.65Show/hide
Query:  YCYGCK--PRASGPLPGPVLLLLAVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYA-CPCNRGWKMQCRC
        YCY CK  P + GP+P  VLL L +  I I LS L   + + +  E  INW LLAVPI++L +V  LSS+D   ++Y   PC R WK  C C
Subjt:  YCYGCK--PRASGPLPGPVLLLLAVVFILIGLSSLFPSEPI-DFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYA-CPCNRGWKMQCRC

A0A2P5ECY5 Uncharacterized protein1.8e-0744.12Show/hide
Query:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEP---IDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSR-------YYACPCNRGWKMQCRC
        M YC  C+   S PL  PV+L L+VV IL+ L   F  EP   ++  + QINW L+  P++LL LV  LSSV+   R       Y  CPC RG K  C C
Subjt:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEP---IDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSR-------YYACPCNRGWKMQCRC

Query:  GR
        GR
Subjt:  GR

A0A5D3BJW1 Uncharacterized protein5.4e-4490.62Show/hide
Query:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRG-AW
        MTYCYGCKPR SGPLPGP+LLLLAVVFILI LSSLFPSEPIDFSEFQINWPLLAVPII+LVLVRCLSS+DSS RYYACPCNRGWKM CRCG G AW
Subjt:  MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRG-AW

A0A6J1C2N0 uncharacterized protein LOC1110078956.3e-0860Show/hide
Query:  PLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIILLVLVRCLSSVDSS
        PLP PVLLLL VVF+ +G S  F  E  ++ +E QINW L A P++L+VLVRCLSSVD S
Subjt:  PLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLLAVPIILLVLVRCLSSVDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein9.9e-0650Show/hide
Query:  PLPGPVLLLLAVVFILIGLSSLFPS--EPIDFSEFQINWPLLAVPIILLVLVRCLSSVDS
        PLP PVLL+LAV  + + LSS + S  E  + +E QIN+ LL +P+ L+VLVR LSS+++
Subjt:  PLPGPVLLLLAVVFILIGLSSLFPS--EPIDFSEFQINWPLLAVPIILLVLVRCLSSVDS

AT2G21185.1 unknown protein3.6e-0839.77Show/hide
Query:  CYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLL-AVPIILLVLVRCLSSVDSSSR-YYACPCNRGWKMQC
        C  C+   S   P PV++++ V  +L+ LSS+   E  +   E  ++W LL AVP+ LL  VRCLS +++S R  Y CPC R W+  C
Subjt:  CYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSE-PIDFSEFQINWPLL-AVPIILLVLVRCLSSVDSSSR-YYACPCNRGWKMQC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTATTGCTATGGCTGTAAACCTCGCGCTTCCGGTCCACTCCCTGGACCTGTCCTTCTGCTTCTCGCCGTAGTCTTCATCTTGATCGGATTGTCCTCTCTGTTCCC
CTCCGAACCAATCGATTTCTCGGAATTCCAAATCAATTGGCCTCTTCTCGCCGTTCCGATTATTTTACTCGTTCTTGTTCGCTGTTTGTCGTCTGTGGATTCTTCATCCA
GGTACTATGCCTGCCCTTGCAATCGCGGCTGGAAGATGCAGTGTCGGTGCGGCCGTGGCGCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTATTGCTATGGCTGTAAACCTCGCGCTTCCGGTCCACTCCCTGGACCTGTCCTTCTGCTTCTCGCCGTAGTCTTCATCTTGATCGGATTGTCCTCTCTGTTCCC
CTCCGAACCAATCGATTTCTCGGAATTCCAAATCAATTGGCCTCTTCTCGCCGTTCCGATTATTTTACTCGTTCTTGTTCGCTGTTTGTCGTCTGTGGATTCTTCATCCA
GGTACTATGCCTGCCCTTGCAATCGCGGCTGGAAGATGCAGTGTCGGTGCGGCCGTGGCGCGTGGTAA
Protein sequenceShow/hide protein sequence
MTYCYGCKPRASGPLPGPVLLLLAVVFILIGLSSLFPSEPIDFSEFQINWPLLAVPIILLVLVRCLSSVDSSSRYYACPCNRGWKMQCRCGRGAW