; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh20G007780 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh20G007780
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCma_Chr20:3686225..3686518
RNA-Seq ExpressionCmaCh20G007780
SyntenyCmaCh20G007780
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571056.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4798.97Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHH QGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.5e-48100Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]3.4e-4898.97Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022944371.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]2.2e-4797.94Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL VS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]3.4e-4898.97Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL+HAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1FU83 auxin-responsive protein SAUR24-like1.7e-4898.97Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1FU85 auxin-responsive protein SAUR23-like1.1e-4797.94Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL VS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like7.5e-49100Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1G6T7 auxin-responsive protein SAUR24-like2.7e-4694.85Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LSLVPHAKQILKMQSGFTK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like7.5e-49100Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.2e-2271.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E++FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.0e-2271.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR205.2e-2364.56Show/hide
Query:  KMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSR Q
Subjt:  KMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.6e-2271.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.0e-2363.1Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.7e-2758.16Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        M IR   ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ+LL  AEE+FGF HP GGLTIPC E  FIDL SRL  S
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

AT4G34790.1 SAUR-like auxin-responsive protein family7.5e-2554.9Show/hide
Query:  SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL
        S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L+ AEE+ GFHH  GGLTIPC+E++F+ L +  
Subjt:  SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRL

Query:  QV
        Q+
Subjt:  QV

AT4G34810.1 SAUR-like auxin-responsive protein family6.1e-2757.14Show/hide
Query:  MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ LS AEE+FGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.0e-2658.76Show/hide
Query:  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSR
        M IR   ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEE+FGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family7.5e-2563.1Show/hide
Query:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTTGCAGTTTA
TGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCATCGTTCCAGCAACTTCTCAGTCACGCAGAGGAGAAGTTTGGATTCCATCATC
CTCAAGGGGGACTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTCACTTCTAGACTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTTGCAGTTTA
TGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCATCGTTCCAGCAACTTCTCAGTCACGCAGAGGAGAAGTTTGGATTCCATCATC
CTCAAGGGGGACTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTCACTTCTAGACTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS