CuGenDBv2

Gene ID	CmaCh20G009930
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Reverse transcriptase
Genome location	Cma_Chr20:5828241..5831023
RNA-Seq Expression	CmaCh20G009930
Synteny	CmaCh20G009930
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006413 - translational initiation (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0008270 - zinc ion binding (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003743 - translation initiation factor activity (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000477 - Reverse transcriptase domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

75.03

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQ+
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP IDL QKE K+VE+ILA+RVRK
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

74.92

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQ+
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

74.92

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQ+
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

75.03

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQK
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

74.92

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQ+
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UXR6 Reverse transcriptase

0.0e+00

74.92

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQ+
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

A0A5D3B7E7 Reverse transcriptase

0.0e+00

74.92

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQ+
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

A0A5D3BYE6 Reverse transcriptase

0.0e+00

74.92

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQ+
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

A0A5D3C4R1 Reverse transcriptase

0.0e+00

74.92

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQ+
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

A0A5D3C9P8 Reverse transcriptase

0.0e+00

75.03

Show/hide

Query:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK
        MAIPL     + ETVP EI  VL  Y D+MP+SLP++LPPRR IDHEIEL+PG KPPAKNAYRMAPPELAELRKQLDELL AGFIRPAKAPY APVLFQK
Subjt:  MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQK

Query:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY
        KKDG+L LCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDL+ GYYQVRIAEGDEPKTTCVTRY  FEFLVMPFGLTNAPATFCTLMNQVF+EY
Subjt:  KKDGTLHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEY

Query:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV
        LD+FV+VYLDDIVVY+TT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV++CG+I M   KI AI++W +P SVS+LRSFLGLANYYRRFV
Subjt:  LDQFVIVYLDDIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFV

Query:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH
        EGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +M GP+L + DVTKPFE+ETDAS +ALGGVL+Q GHPIA+ESRKLN A+RRYTVSEKEMLAVVH
Subjt:  EGFSRRAAPLTELLKKDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVH

Query:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP
        CLR WRQYL+GS FVVKTDNSA  HFF QPKLT+KQA WQE LAEFDF+FEHK G  NQAADALS+K EHAA+C+LAH+  ++I GS+RD ++E L KD 
Subjt:  CLRVWRQYLMGSQFVVKTDNSAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDP

Query:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG
        +A+ V+ LAKAGKTRQFWVE D+L+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYAL+KKGYFWPNMRDD+MQYTKTC ICQQDKVEK KV+G
Subjt:  SAKAVVELAKAGKTRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSG

Query:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN
        LL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFKH+VKLWG+P SI+SDRDGRFIG+FW ELF+FLGT+LN
Subjt:  LLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLN

Query:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA
        ISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+                                           KNPQA +FT+EW+QT DIARA
Subjt:  ISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIH-----------------------------------------WKNPQAHHFTREWKQTTDIARA

Query:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI
        YLEKASK MKKWADKKRRP++FRAGDQVLIKL+PEQ+RFR +KDQRLVRKYEGP+EVLKK+G TSYRV+LPTWMKI+PVIHVSNLKPYH D +D QRN +
Subjt:  YLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIHVSNLKPYHPDPDDDQRNAI

Query:  TRPSIDLRQKETKEVEKILADRVRK
        TRP+IDL QKE K+VE+ILA+RVR+
Subjt:  TRPSIDLRQKETKEVEKILADRVRK

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.7e-126

31.32

Show/hide

Query:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL
        E+ ++   + DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTL + +DY+ L
Subjt:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL

Query:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  FTKLDL+  Y+ +R+ +GDE K        VFE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++
Subjt:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY

Query:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK
        + +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Subjt:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK

Query:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM
        KD  W W+     A E++K  ++  PVL   D +K   +ETDAS  A+G VL Q+      +P+ + S K++ A+  Y+VS+KEMLA++  L+ WR YL 
Subjt:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM

Query:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV
         +   F + TD+ + I    ++ +   K+ A WQ  L +F+F+  ++ G  N  ADALS+  +         I  +  D S+  + +  +  D   + V 
Subjt:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV

Query:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE
        E     K                 ++  +L+   +++ +P   +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Subjt:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE

Query:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF
          K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +AE TA++F + ++  +G P  II+D D  F    W +    
Subjt:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF

Query:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI
            +  S  Y PQTDGQTER N  +E+ LR         W                          +H  +P            +    ++E  Q    
Subjt:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY
         + +L   +  MKK+ D K + I +F+ GD V++K        +S K   L   + GP  VL+K G  +Y + LP  +K       HVS+L+ Y
Subjt:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY

P0CT35 Transposon Tf2-2 polyprotein

2.7e-126

31.32

Show/hide

Query:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL
        E+ ++   + DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTL + +DY+ L
Subjt:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL

Query:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  FTKLDL+  Y+ +R+ +GDE K        VFE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++
Subjt:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY

Query:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK
        + +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Subjt:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK

Query:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM
        KD  W W+     A E++K  ++  PVL   D +K   +ETDAS  A+G VL Q+      +P+ + S K++ A+  Y+VS+KEMLA++  L+ WR YL 
Subjt:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM

Query:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV
         +   F + TD+ + I    ++ +   K+ A WQ  L +F+F+  ++ G  N  ADALS+  +         I  +  D S+  + +  +  D   + V 
Subjt:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV

Query:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE
        E     K                 ++  +L+   +++ +P   +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Subjt:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE

Query:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF
          K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +AE TA++F + ++  +G P  II+D D  F    W +    
Subjt:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF

Query:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI
            +  S  Y PQTDGQTER N  +E+ LR         W                          +H  +P            +    ++E  Q    
Subjt:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY
         + +L   +  MKK+ D K + I +F+ GD V++K        +S K   L   + GP  VL+K G  +Y + LP  +K       HVS+L+ Y
Subjt:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY

P0CT36 Transposon Tf2-3 polyprotein

2.7e-126

31.32

Show/hide

Query:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL
        E+ ++   + DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTL + +DY+ L
Subjt:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL

Query:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  FTKLDL+  Y+ +R+ +GDE K        VFE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++
Subjt:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY

Query:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK
        + +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Subjt:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK

Query:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM
        KD  W W+     A E++K  ++  PVL   D +K   +ETDAS  A+G VL Q+      +P+ + S K++ A+  Y+VS+KEMLA++  L+ WR YL 
Subjt:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM

Query:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV
         +   F + TD+ + I    ++ +   K+ A WQ  L +F+F+  ++ G  N  ADALS+  +         I  +  D S+  + +  +  D   + V 
Subjt:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV

Query:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE
        E     K                 ++  +L+   +++ +P   +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Subjt:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE

Query:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF
          K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +AE TA++F + ++  +G P  II+D D  F    W +    
Subjt:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF

Query:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI
            +  S  Y PQTDGQTER N  +E+ LR         W                          +H  +P            +    ++E  Q    
Subjt:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY
         + +L   +  MKK+ D K + I +F+ GD V++K        +S K   L   + GP  VL+K G  +Y + LP  +K       HVS+L+ Y
Subjt:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY

P0CT37 Transposon Tf2-4 polyprotein

2.7e-126

31.32

Show/hide

Query:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL
        E+ ++   + DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTL + +DY+ L
Subjt:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL

Query:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  FTKLDL+  Y+ +R+ +GDE K        VFE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++
Subjt:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY

Query:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK
        + +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Subjt:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK

Query:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM
        KD  W W+     A E++K  ++  PVL   D +K   +ETDAS  A+G VL Q+      +P+ + S K++ A+  Y+VS+KEMLA++  L+ WR YL 
Subjt:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM

Query:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV
         +   F + TD+ + I    ++ +   K+ A WQ  L +F+F+  ++ G  N  ADALS+  +         I  +  D S+  + +  +  D   + V 
Subjt:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV

Query:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE
        E     K                 ++  +L+   +++ +P   +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Subjt:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE

Query:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF
          K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +AE TA++F + ++  +G P  II+D D  F    W +    
Subjt:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF

Query:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI
            +  S  Y PQTDGQTER N  +E+ LR         W                          +H  +P            +    ++E  Q    
Subjt:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY
         + +L   +  MKK+ D K + I +F+ GD V++K        +S K   L   + GP  VL+K G  +Y + LP  +K       HVS+L+ Y
Subjt:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY

P0CT41 Transposon Tf2-12 polyprotein

2.7e-126

31.32

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Query:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL
        E+ ++   + DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTL + +DY+ L
Subjt:  EINEVLNNYADIMPESLPQTLP-PRRGIDHEIELI-PGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGTLHLCIDYRAL

Query:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  FTKLDL+  Y+ +R+ +GDE K        VFE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++
Subjt:  NKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVY

Query:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK
        + +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Subjt:  NTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK

Query:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM
        KD  W W+     A E++K  ++  PVL   D +K   +ETDAS  A+G VL Q+      +P+ + S K++ A+  Y+VS+KEMLA++  L+ WR YL 
Subjt:  KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQG-----HPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLM

Query:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV
         +   F + TD+ + I    ++ +   K+ A WQ  L +F+F+  ++ G  N  ADALS+  +         I  +  D S+  + +  +  D   + V 
Subjt:  GS--QFVVKTDN-SAIFHFFDQPKLTAKQ-AWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVV

Query:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE
        E     K                 ++  +L+   +++ +P   +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Subjt:  ELAKAGK------------TRQFWVEGDILMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVE

Query:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF
          K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +AE TA++F + ++  +G P  II+D D  F    W +    
Subjt:  KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAF

Query:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI
            +  S  Y PQTDGQTER N  +E+ LR         W                          +H  +P            +    ++E  Q    
Subjt:  LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW--------------------------IHWKNP------------QAHHFTREWKQTTDI

Query:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY
         + +L   +  MKK+ D K + I +F+ GD V++K        +S K   L   + GP  VL+K G  +Y + LP  +K       HVS+L+ Y
Subjt:  ARAYLEKASKHMKKWADKKRRPI-QFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMK--IHPVIHVSNLKPY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

7.0e-21

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Query:  HLKLVFDKLRQNQLYVKKEKCAFAQTCINFLG--HVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSW
        HL +V     Q+Q Y  ++KCAF Q  I +LG  H++    +S    K++A+  W  P + ++LR FLGL  YYRRFV+ + +   PLTELLKK ++  W
Subjt:  HLKLVFDKLRQNQLYVKKEKCAFAQTCINFLG--HVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSW

Query:  SNDCQMAFEDLKTTIMRGPVLELVDVTKPF
        +    +AF+ LK  +   PVL L D+  PF
Subjt:  SNDCQMAFEDLKTTIMRGPVLELVDVTKPF

Sequences

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CDS sequence

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ATGGCCATACCATTGATGGAAGTAACAACCACCGAAGAAACTGTCCCAAATGAAATCAATGAGGTACTAAACAACTATGCCGACATAATGCCAGAGAGCTTACCC
CAAACATTACCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCGGAGTTAAACCGCCAGCGAAGAACGCATACCGGATGGCTCCGCCCGAGCTAGCC
GAATTAAGGAAACAACTGGATGAGTTGCTGAAGGCGGGATTCATCCGCCCGGCAAAAGCACCCTACAGAGCCCCCGTACTGTTCCAGAAGAAGAAGGATGGGACG
TTGCATCTGTGCATAGACTATAGAGCCTTAAACAAGGTGACGGTACGCAACAAATATCCACTGCCGATAATATCCGACTTATTCGACCAACTTCACGGGGCCAAG
TACTTCACGAAGTTGGACTTACAATTAGGGTATTACCAAGTACGTATTGCCGAAGGGGACGAGCCCAAGACGACGTGCGTAACAAGATATAGGGTCTTCGAATTC
CTAGTAATGCCCTTTGGCTTGACAAACGCTCCAGCTACTTTCTGCACGTTGATGAACCAAGTTTTCTACGAATACTTGGATCAGTTTGTCATAGTATACCTCGAC
GACATAGTGGTTTACAACACAACCCTAGAGGAACACAAAGTGCACTTGAAGCTGGTGTTCGACAAGCTACGACAAAACCAACTGTATGTCAAGAAAGAGAAATGT
GCATTCGCACAAACATGCATCAACTTCCTTGGACATGTCGTCAAATGTGGACAGATTAGTATGCATAGCGATAAGATAAAAGCTATCCAAGAATGGAAGGTTCCT
ACTTCCGTATCCGATTTGCGGTCCTTCTTAGGATTAGCCAACTACTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCCGCCCCATTGACAGAGCTGTTGAAG
AAAGACCACACTTGGTCGTGGTCAAATGATTGTCAAATGGCCTTTGAAGATCTGAAAACAACCATTATGAGGGGTCCTGTCCTCGAATTGGTAGATGTTACAAAG
CCATTTGAAATAGAAACAGACGCTTCCTACTTTGCCCTAGGTGGGGTCCTTATTCAGCAAGGCCACCCCATCGCTTTCGAAAGTCGAAAGCTCAATGACGCCAAA
CGTAGATACACTGTCTCCGAAAAAGAAATGCTGGCAGTAGTCCATTGCCTTCGAGTCTGGAGACAATATCTCATGGGATCACAGTTCGTAGTGAAGACGGATAAC
AGCGCCATTTTCCACTTCTTTGATCAACCAAAATTGACGGCAAAACAAGCCTGGTGGCAGGAGTCGTTGGCCGAATTCGACTTCAAGTTCGAACACAAAGCAGGG
AAGTGTAATCAAGCAGCCGACGCACTGAGTCAGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATTCACTCAAATAAGATCGATGGATCGATGCGCGAC
ATCATCAAGGAACATTTACATAAAGACCCATCGGCCAAAGCCGTCGTCGAACTAGCTAAAGCTGGGAAAACACGACAGTTTTGGGTTGAGGGAGACATTCTGATG
ACAAAAGGAAACAGATTGTATGTCCCAAGAACGGGAGAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGCCGGACACCCTGGGTGGCAAAGA
ACATACGCTCTAATAAAAAAAGGGTACTTCTGGCCAAACATGCGAGACGACATCATGCAATACACCAAGACGTGCTTCATCTGTCAACAGGACAAAGTCGAGAAA
GCCAAAGTCTCAGGACTCTTGGAACCTCTACCTGTGCCGACAAGACCCTGGGAAAGTGTATCTCTGGACTTCATAACACACCTCCCAAAAGTCGGGGAATATGAC
GCTATCTTGGTTATCGTAGACCGATTCTCAAAATATGCGACGTTCATCCCCACTCCCAAATTATGCTCGGCCGAACTCACAGCTCAACTATTTTTCAAACACATT
GTAAAGTTATGGGGTATTCCATGGAGCATCATCAGTGATCGGGATGGCAGATTCATTGGGACATTCTGGATCGAGTTATTCGCCTTCTTGGGAACAACCTTAAAC
ATCTCCTCGAGTTACCACCCTCAAACCGATGGTCAGACAGAACGGTTCAATTGCTTGCTCGAAGAATACTTACGTCACTTCGTTGACGCTCGCCAAAAGAACTGG
ATACACTGGAAAAACCCTCAAGCTCACCACTTCACAAGGGAATGGAAGCAGACAACAGATATAGCCCGGGCATATTTAGAGAAGGCTTCCAAGCATATGAAAAAG
TGGGCAGACAAGAAACGTCGCCCCATTCAATTCCGAGCAGGAGATCAAGTCCTCATCAAGCTGAAACCAGAACAGATCAGATTTCGCAGCCAAAAGGACCAGAGA
CTAGTTCGAAAATATGAAGGCCCGATTGAAGTCCTTAAAAAGATCGGGACTACCTCCTACCGAGTTTCACTCCCCACATGGATGAAAATCCACCCAGTAATTCAT
GTGAGCAACTTGAAGCCATACCACCCTGACCCAGACGATGACCAACGAAATGCAATCACAAGACCGAGCATCGATCTGAGGCAAAAAGAAACAAAAGAAGTAGAG
AAGATCCTCGCCGACAGGGTTAGGAAGATAGGATGA

mRNA sequence

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Protein sequence

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MAIPLMEVTTTEETVPNEINEVLNNYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYRAPVLFQKKKDGT
LHLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLQLGYYQVRIAEGDEPKTTCVTRYRVFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLD
DIVVYNTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGQISMHSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK
KDHTWSWSNDCQMAFEDLKTTIMRGPVLELVDVTKPFEIETDASYFALGGVLIQQGHPIAFESRKLNDAKRRYTVSEKEMLAVVHCLRVWRQYLMGSQFVVKTDN
SAIFHFFDQPKLTAKQAWWQESLAEFDFKFEHKAGKCNQAADALSQKGEHAALCMLAHIHSNKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDILM
TKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCFICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYD
AILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHIVKLWGIPWSIISDRDGRFIGTFWIELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNW
IHWKNPQAHHFTREWKQTTDIARAYLEKASKHMKKWADKKRRPIQFRAGDQVLIKLKPEQIRFRSQKDQRLVRKYEGPIEVLKKIGTTSYRVSLPTWMKIHPVIH
VSNLKPYHPDPDDDQRNAITRPSIDLRQKETKEVEKILADRVRKIG

CmaCh20G009930 (gene) of Cucurbita maxima (Rimu) v1.1 genome