| GenBank top hits | e value | %identity | Alignment |
|---|
| RVW50731.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 4.2e-141 | 55.84 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
Query: -------------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
+E + G L + D ++ + KE+ L + E S
Subjt: -------------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
Query: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
+PK+W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELV RPSN S+IGTKWVFRNKMDENG
Subjt: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
Query: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRA
Subjt: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
Query: ------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRP
EFEMSMMGEL++FLGLQIKQLK G FINQ KY KDLLKRF K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRP
Subjt: ------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRP
Query: DIMFS
DIM+S
Subjt: DIMFS
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| RVW74396.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 9.7e-130 | 55.6 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
Query: -------------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
+E + G L + D ++ + KEE L + E S
Subjt: -------------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
Query: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
+PK+W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELV RPSN S+IGTKWVFRNKMDENG
Subjt: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
Query: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
I+RNKARLVAQGY QEEGI+YEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKK LYGLKQAPRA
Subjt: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
Query: CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEK
CEFEMSMMGEL+FFLGLQIKQLK G FINQ KY KDLLKRF K+ +TPMS+S K D DEK
Subjt: CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEK
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| RVW80634.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 1.5e-135 | 50.45 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
Query: -------------------------------------------------------IERNFGDLLVSDNGKEIVTSKE------------EMSLKEEGSSS
+E + G L + D ++ + ++ ++ E S
Subjt: -------------------------------------------------------IERNFGDLLVSDNGKEIVTSKE------------EMSLKEEGSSS
Query: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
+PK+W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELV RPSN S+IGTKWVFRNKMDENG
Subjt: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
Query: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRA
Subjt: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
Query: ------------------------------------------------------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKR
EFEMSMMGEL++FLGLQIKQLK G FINQ KY KDLLKR
Subjt: ------------------------------------------------------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKR
Query: FKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS
F K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM+S
Subjt: FKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS
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| RVW93906.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 4.4e-130 | 49.73 | Show/hide |
Query: MKATWDDSDES-ASGSDEEVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIER-
M ATW +S+ES ++EVAN CFMA D DE SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+ +E+
Subjt: MKATWDDSDES-ASGSDEEVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIER-
Query: ----------------------------------------------------------NFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
+ G L + D ++ + KEE L + E S
Subjt: ----------------------------------------------------------NFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
Query: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
+PK+W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELV RPSN S+IGTKWVFRNKMDENG
Subjt: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
Query: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
I+RNKARLVAQGY QEEGIDYEETF VARLEAIRMLLAFA +K+F+LYQMDVKS FLNG+I EEVYVEQPP F++ FP+HV+KLKKALYGLKQAPRA
Subjt: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
Query: ------------------------------------------------------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKR
EFEMSMMGEL++FLGLQIKQLK G F+NQ KY KDLLKR
Subjt: ------------------------------------------------------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKR
Query: FKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS
F K+ +TPMS+ KLD DEKGKS+D YRGMIG LLYLTA +PDIM+S
Subjt: FKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS
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| RVW98982.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 7.7e-135 | 50.99 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
Query: -------------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
+E + G L + D ++ + KE+ L + E S
Subjt: -------------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
Query: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
+PK+W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELV RPSN S+IGTKWVFRNKMDENG
Subjt: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
Query: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRA
Subjt: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
Query: ------------------------------------------------------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKR
EFEMSMMGEL++FLGLQIKQLK G FINQ KY KDLLKR
Subjt: ------------------------------------------------------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKR
Query: FKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS
F K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM S
Subjt: FKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9ERY5 CCHC-type domain-containing protein | 1.9e-139 | 56.27 | Show/hide |
Query: MKATWDDSDESAS---GSDEEVANFCFMAHSDKEDEQEDEQE-----------------------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
+K TWDDSDES S SD EVAN C + + ++ + EDE DEVCL S K KW+LDSGCSRHMTG+ +KF +L+
Subjt: MKATWDDSDESAS---GSDEEVANFCFMAHSDKEDEQEDEQE-----------------------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
Query: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIV--TSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQI
KDGG V FGDN KGKIIG I + + +S+ K+ V EE +L + +PK W SHPK+LI+G++E GV TRS + ++ NN+AF+SQI
Subjt: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIV--TSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQI
Query: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
EPK++ +A DE WILAMQEELNQFERNKVW L RP + S+IGTKWVFRNK DE G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA
Subjt: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
Query: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA-------------------------------------------
+KNF L+QMDVKSAFLNG+I EEVYVEQPPGFEN EFP+HV+KL KALYGLKQAPRA
Subjt: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA-------------------------------------------
Query: --------C---------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYL
C EFEMSMMGEL FFLGLQIKQ ++GIF+NQ KY DLLKRF K TPMS STKLDKDEKGK VD+K YRGMIGSLLYL
Subjt: --------C---------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYL
Query: TASRPDIMFS
TASRPDIMFS
Subjt: TASRPDIMFS
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| A0A2N9G3V4 CCHC-type domain-containing protein | 1.9e-139 | 56.27 | Show/hide |
Query: MKATWDDSDESAS---GSDEEVANFCFMAHSDKEDEQEDEQE-----------------------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
+K TWDDSDES S SD EVAN C + + ++ + EDE DEVCL S K KW+LDSGCSRHMTG+ +KF +L+
Subjt: MKATWDDSDESAS---GSDEEVANFCFMAHSDKEDEQEDEQE-----------------------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
Query: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIV--TSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQI
KDGG V FGDN KGKIIG I + + +S+ K+ V EE +L + +PK W SHPK+LI+G++E GV TRS + ++ NN+AF+SQI
Subjt: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIV--TSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQI
Query: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
EPK++ +A DE WILAMQEELNQFERNKVW L RP + S+IGTKWVFRNK DE G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA
Subjt: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
Query: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA-------------------------------------------
+KNF L+QMDVKSAFLNG+I EEVYVEQPPGFEN EFP+HV+KL KALYGLKQAPRA
Subjt: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA-------------------------------------------
Query: --------C---------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYL
C EFEMSMMGEL FFLGLQIKQ ++GIF+NQ KY DLLKRF K TPMS STKLDKDEKGK VD+K YRGMIGSLLYL
Subjt: --------C---------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYL
Query: TASRPDIMFS
TASRPDIMFS
Subjt: TASRPDIMFS
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| A0A2N9IDJ4 CCHC-type domain-containing protein | 2.8e-138 | 56.1 | Show/hide |
Query: MKATWDDSDESAS---GSDEEVANFCFMAHSDKEDEQEDEQE-----------------------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
+K TWDDSDES S SD EVAN C + + ++ + EDE DEVCL S K KW+LDSGCSRHMTG+ +KF +L+
Subjt: MKATWDDSDESAS---GSDEEVANFCFMAHSDKEDEQEDEQE-----------------------DEVCL-KASKKNKWYLDSGCSRHMTGNPSKFVNLS
Query: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIVTSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEP
KDGG V FGDN KGKIIG +V D E EE +L + +PK W +HPK+LI+G++E GV TRS + ++ NN+AF+SQIEP
Subjt: KKDGGLVTFGDNKKGKIIGKGTIERNFGDLLVSDNGKEIVTSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEP
Query: KSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYK
K++ +A DE WILAMQEELNQFERNKVW L RP + S+IGTKWVFRNK DE G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA +K
Subjt: KSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYK
Query: NFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA---------------------------------------------
NF L+QMDVKSAFLNG+I EEVYVEQPPGFEN EFP+HV+KL KALYGLKQAPRA
Subjt: NFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA---------------------------------------------
Query: ------C---------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTA
C EFEMSMMGEL FFLGLQIKQ ++GIF+NQ KY DLLKRF K TPMS STKLDKDEKGK VD+K YRGMIGSLLYLTA
Subjt: ------C---------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTA
Query: SRPDIMFS
SRPDIMFS
Subjt: SRPDIMFS
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| A0A438ESK8 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-141 | 55.84 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
Query: -------------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
+E + G L + D ++ + KE+ L + E S
Subjt: -------------------------------------------------------IERNFGDLLVSDNGKEIVT----SKEEMSL--------KEEGSSS
Query: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
+PK+W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELV RPSN S+IGTKWVFRNKMDENG
Subjt: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
Query: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRA
Subjt: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
Query: ------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRP
EFEMSMMGEL++FLGLQIKQLK G FINQ KY KDLLKRF K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRP
Subjt: ------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRP
Query: DIMFS
DIM+S
Subjt: DIMFS
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| A0A438H7V2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.5e-136 | 50.45 | Show/hide |
Query: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
M ATW +S+ES+ E EVAN CFMA D ++ SK++KW+LDSGCSRHMTG+ SKF L+K+ GG VTFGDN KG+IIG+
Subjt: MKATWDDSDESASGSDE-EVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGT----
Query: -------------------------------------------------------IERNFGDLLVSDNGKEIVTSKE------------EMSLKEEGSSS
+E + G L + D ++ + ++ ++ E S
Subjt: -------------------------------------------------------IERNFGDLLVSDNGKEIVTSKE------------EMSLKEEGSSS
Query: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
+PK+W++ ++HP+D I+G+ GV+TRSS+ N+ NNLAF+SQIEPK++KDA DE W++AMQEELNQFER++VWELV RPSN S+IGTKWVFRNKMDENG
Subjt: MPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENG
Query: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EEVYVEQPPGF++ FP+HV+KLKKALYGLKQAPRA
Subjt: NIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA
Query: ------------------------------------------------------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKR
EFEMSMMGEL++FLGLQIKQLK G FINQ KY KDLLKR
Subjt: ------------------------------------------------------------CEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKR
Query: FKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS
F K+ +TPMS+S KLD DEKGKS+D YRGMIGSLLYLTASRPDIM+S
Subjt: FKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.1e-34 | 32.33 | Show/hide |
Query: WILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKS
W A+ ELN + N W + RP N +I+ ++WVF K +E GN IR KARLVA+G+ Q+ IDYEETFAPVAR+ + R +L+ N ++QMDVK+
Subjt: WILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKS
Query: AFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA-----------CE-------------------------------------------
AFLNG + EE+Y+ P G +V KL KA+YGLKQA R CE
Subjt: AFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA-----------CE-------------------------------------------
Query: --------FEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTK---LDKDEKGKSVDIKAYRGMIGSLLY-LTASRPDI
F M+ + E+ F+G++I+ ++ I+++Q Y K +L +F TP+ + L+ DE + R +IG L+Y + +RPD+
Subjt: --------FEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTK---LDKDEKGKSVDIKAYRGMIGSLLY-LTASRPDI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-35 | 31.68 | Show/hide |
Query: EPKSLKDA----ENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLL
EP+SLK+ E ++ + AMQEE+ ++N ++LV P + KWVF+ K D + ++R KARLV +G+ Q++GID++E F+PV ++ +IR +L
Subjt: EPKSLKDA----ENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLL
Query: AFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPR----------------------------------------
+ A+ + + Q+DVK+AFL+G + EE+Y+EQP GFE H V KL K+LYGLKQAPR
Subjt: AFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPR----------------------------------------
Query: ---------------------ACEFEMSMMGELSFFLGLQI--KQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDK-------DEKGKSVD
+ F+M +G LG++I ++ ++++QEKY + +L+RF K TP++ KL K +EKG
Subjt: ---------------------ACEFEMSMMGELSFFLGLQI--KQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDK-------DEKGKSVD
Query: IKAYRGMIGSLLY-LTASRPDI
+ Y +GSL+Y + +RPDI
Subjt: IKAYRGMIGSLLY-LTASRPDI
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 6.5e-20 | 45.9 | Show/hide |
Query: KTRSSINLFN---NLAFVSQI--EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI
++++ IN N +L + I EPKS+ A D W AMQEEL+ RNK W LV P N +I+G KWVF+ K+ +G + R KARLVA+G+ QEEGI
Subjt: KTRSSINLFN---NLAFVSQI--EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI
Query: DYEETFAPVARLEAIRMLLAFA
+ ET++PV R IR +L A
Subjt: DYEETFAPVARLEAIRMLLAFA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.0e-44 | 34.28 | Show/hide |
Query: LAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELV-HRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAI
++ ++ EP++ A DE W AM E+N N W+LV PS+ +I+G +W+F K + +G++ R KARLVA+GY Q G+DY ETF+PV + +I
Subjt: LAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELV-HRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAI
Query: RMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAC----------------------------------
R++L A +++ + Q+DV +AFL G + ++VY+ QPPGF + + P++V KL+KALYGLKQAPRA
Subjt: RMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAC----------------------------------
Query: --------------------------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRG
F + EL +FLG++ K++ G+ ++Q +Y DLL R K TPM+ S KL K D YRG
Subjt: --------------------------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRG
Query: MIGSLLYLTASRPDIMFS
++GSL YL +RPDI ++
Subjt: MIGSLLYLTASRPDIMFS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.8e-44 | 34.08 | Show/hide |
Query: EPKSLKDAENDEFWILAMQEELNQFERNKVWELV-HRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA
EP++ A D+ W AM E+N N W+LV P + +I+G +W+F K + +G++ R KARLVA+GY Q G+DY ETF+PV + +IR++L A
Subjt: EPKSLKDAENDEFWILAMQEELNQFERNKVWELV-HRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA
Query: SYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAC-----------------------------------------
+++ + Q+DV +AFL G + +EVY+ QPPGF + + P +V +L+KA+YGLKQAPRA
Subjt: SYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRAC-----------------------------------------
Query: -------------------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLY
F + +L +FLG++ K++ G+ ++Q +YT DLL R K TPM+TS KL K D YRG++GSL Y
Subjt: -------------------EFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLY
Query: LTASRPDIMFS
L +RPD+ ++
Subjt: LTASRPDIMFS
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.5e-43 | 34.6 | Show/hide |
Query: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
EP + +A+ W AM +E+ E WE+ P N IG KWV++ K + +G I R KARLVA+GY Q+EGID+ ETF+PV +L +++++LA ++
Subjt: EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
Query: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEF----PHHVYKLKKALYGLKQAPR----------------------------------------
NF L+Q+D+ +AFLNG + EE+Y++ PPG+ + P+ V LKK++YGLKQA R
Subjt: YKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEF----PHHVYKLKKALYGLKQAPR----------------------------------------
Query: ---------------------ACEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIG
+C F++ +G L +FLGL+I + GI I Q KY DLL G K + PM S G VD KAYR +IG
Subjt: ---------------------ACEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIG
Query: SLLYLTASRPDIMFS
L+YL +R DI F+
Subjt: SLLYLTASRPDIMFS
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 5.3e-09 | 35.51 | Show/hide |
Query: FEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEK---GKSVDIKAYRGMIGSLLYLTASRPDIMFS-DILMQ
F M +G + +FLG+QIK +G+F++Q KY + +L N G + PMST L + K D +R ++G+L YLT +RPDI ++ +I+ Q
Subjt: FEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEK---GKSVDIKAYRGMIGSLLYLTASRPDIMFS-DILMQ
Query: ILPEAYL
+ E L
Subjt: ILPEAYL
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 4.6e-21 | 45.9 | Show/hide |
Query: KTRSSINLFN---NLAFVSQI--EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI
++++ IN N +L + I EPKS+ A D W AMQEEL+ RNK W LV P N +I+G KWVF+ K+ +G + R KARLVA+G+ QEEGI
Subjt: KTRSSINLFN---NLAFVSQI--EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGI
Query: DYEETFAPVARLEAIRMLLAFA
+ ET++PV R IR +L A
Subjt: DYEETFAPVARLEAIRMLLAFA
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