CuGenDBv2

Gene ID	CmaCh20G010470
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Eukaryotic translation initiation factor 6
Genome location	Cma_Chr20:7785542..7788403
RNA-Seq Expression	CmaCh20G010470
Synteny	CmaCh20G010470
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022147757.1 eukaryotic translation initiation factor 6-2 [Momordica charantia]

1.2e-129

97.96

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

5.7e-132

99.59

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

XP_022948101.1 eukaryotic translation initiation factor 6-2 [Cucurbita moschata]

1.5e-129

97.14

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

2.0e-132

100

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

1.5e-129

97.14

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

5.7e-130

97.96

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1F0A8 Eukaryotic translation initiation factor 6

2.8e-132

99.59

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1G8F7 Eukaryotic translation initiation factor 6

7.5e-130

97.14

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1I8L9 Eukaryotic translation initiation factor 6

9.5e-133

100

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1L2F0 Eukaryotic translation initiation factor 6

7.5e-130

97.14

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

1.3e-102

75.31

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

1.3e-102

75.72

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

3.7e-102

74.9

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

5.0e-123

87.76

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN I+CND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWT+FCGSDTTATELSVI+S+FKLREAQPSSIVDEMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

Q9TU47 Eukaryotic translation initiation factor 6

4.4e-103

75.72

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RN LPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

3.8e-94

67.61

Show/hide

Query:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ
        MATRL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +ES+L GVIP+V TSI G+  IG LC GNKNGLL+ HT TDQELQHLR+SLPD+VVVQRI+
Subjt:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ

Query:  ERLSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI
        E + ALGN I+CND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI+AGL 
Subjt:  ERLSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI

Query:  ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
         NDWTAFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSLID+YV
Subjt:  ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

AT3G55620.1 Translation initiation factor IF6

3.6e-124

87.76

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN I+CND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWT+FCGSDTTATELSVI+S+FKLREAQPSSIVDEMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACAAATGCTTATTGCTTGGTTGCAATTGGTGGCTCTGAGAACTTCTAC
AGTGCCTTTGAATCTGAATTAGGTGGTGTCATTCCAGTCGTTAAAACATCCATCGATGGCACGCGCATTATTGGTCGTCTATGTGCTGGAAACAAAAATGGGCTT
CTTGTACCACACACCACTACTGACCAAGAACTTCAGCATTTGAGAAACAGCCTACCTGACCAAGTTGTTGTCCAACGTATACAAGAGAGACTGTCTGCTCTGGGG
AATACAATTTCTTGTAATGATCATGTTGCTCTCACACATACTGATCTCGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAG
ACGGTAGCGGGCAACGTTCTCGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCCATTGAAGATTTGGATGAGCTATCAACC
CTTCTTCAGGTCCCTTTAGTTGCTGGAACAGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACG
ACTGCAACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGCTCCATTGTTGATGAAATGAGGAAGTCACTAATAGACAGTTACGTG
TGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALG
NTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIANDWTAFCGSDT
TATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

CmaCh20G010470 (gene) of Cucurbita maxima (Rimu) v1.1 genome