; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh20G010560 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh20G010560
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr20:7922119..7922559
RNA-Seq ExpressionCmaCh20G010560
SyntenyCmaCh20G010560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571341.1 hypothetical protein SDJN03_30256, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5887.07Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTN-DDNNNNNSS
        MSLVDPS GRAFVW VFF LF CILSGGACLLVYIILPETE T WLPV GLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA SAN+TN DDNNNNNSS
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTN-DDNNNNNSS

Query:  GERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
        GE PRCDAR Q EE+GNND+QR+SNLSSNNSI SRESEIP  ISMGS
Subjt:  GERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

KAG7011114.1 hypothetical protein SDJN02_27912, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-5987.76Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTN-DDNNNNNSS
        MSLVDPS GRAFVW VFF LF CILSGGACLLVYIILPETE T WLPV GLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSAN+TN DDNNNNNSS
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTN-DDNNNNNSS

Query:  GERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
        GE PRCDAR Q EE+GNND+QR+SNLSSNNSI SRESEIP  ISMGS
Subjt:  GERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

XP_008460874.1 PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]7.3e-4266.89Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANNTNDDNNNNN-
        MSLV+PS GRAF+WIV  FLFF I+SGG CLL+Y+ILPE+E T WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        NN ND+NNNNN 
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANNTNDDNNNNN-

Query:  --SSGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
          SS E PR D  ++  E+ NN +QR+SN SSNNSI SRESE+PL I+M S
Subjt:  --SSGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

XP_022931986.1 uncharacterized protein LOC111438319 [Cucurbita moschata]5.0e-5987.16Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTNDD--NNNNNS
        MSLVDPS GRAFVW VFF LF CILSGGACLLVYIILPETE T WLPV GLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSAN+TNDD  NNNNNS
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTNDD--NNNNNS

Query:  SGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
        SGE PRCDAR Q EE+GNND+QR+SNLSSNNSI SRESEIP  ISMGS
Subjt:  SGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

XP_038900833.1 uncharacterized protein LOC120087896 [Benincasa hispida]1.7e-4367.55Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSAN----NTNDDNNNN
        MSLV+PS GRAF+WIV  FLFF I+SGG CLL+Y+ILPETE T WLPV GLSLVCLPWFFW+LTFFYRVISRACGFRVS+ +         N N++NNNN
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSAN----NTNDDNNNN

Query:  NSSGERPRCDARDQI-EENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
        N+S E PR D  D++ EE+ +N +QR+SN SSNNSI SRESE+PL I+MGS
Subjt:  NSSGERPRCDARDQI-EENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

TrEMBL top hitse value%identityAlignment
A0A0A0LJX6 Uncharacterized protein6.0e-4267.33Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANNTNDDNNNNN-
        MSLV+PS GRAF+WIV  FLFF ILSGG CLL+Y+ILPETE T WLP+ GLSLVCLPWFFW+LTFFYRV+SRACGFRVSL +    S+NN N +NNNNN 
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANNTNDDNNNNN-

Query:  -SSGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
         SS E  + D  ++  E+ NN +QR SN SSNNSI SRESE+PL I+M S
Subjt:  -SSGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

A0A1S3CDW9 Uncharacterized protein3.5e-4266.89Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANNTNDDNNNNN-
        MSLV+PS GRAF+WIV  FLFF I+SGG CLL+Y+ILPE+E T WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        NN ND+NNNNN 
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANNTNDDNNNNN-

Query:  --SSGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
          SS E PR D  ++  E+ NN +QR+SN SSNNSI SRESE+PL I+M S
Subjt:  --SSGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

A0A5A7TCV0 Uncharacterized protein3.5e-4266.89Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANNTNDDNNNNN-
        MSLV+PS GRAF+WIV  FLFF I+SGG CLL+Y+ILPE+E T WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        NN ND+NNNNN 
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANNTNDDNNNNN-

Query:  --SSGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
          SS E PR D  ++  E+ NN +QR+SN SSNNSI SRESE+PL I+M S
Subjt:  --SSGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

A0A6J1EV39 uncharacterized protein LOC1114383192.4e-5987.16Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTNDD--NNNNNS
        MSLVDPS GRAFVW VFF LF CILSGGACLLVYIILPETE T WLPV GLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSAN+TNDD  NNNNNS
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTNDD--NNNNNS

Query:  SGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
        SGE PRCDAR Q EE+GNND+QR+SNLSSNNSI SRESEIP  ISMGS
Subjt:  SGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

A0A6J1G7P7 uncharacterized protein LOC1114515885.8e-3764.19Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATS--ANNTNDDNNNNNS
        MSLVDPS+GR  +WIV F LF  +LSGG CLL+YI LPETE T WLPV GLSLVCLPWFFW LTF YR+ISRACGFRVSL +  +  A  TN++N +NN+
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATS--ANNTNDDNNNNNS

Query:  SGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
          E P+ DA  Q   N  + NQRQSN SSN+S  SRESE PL I+MGS
Subjt:  SGERPRCDARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30770.1 Putative membrane lipoprotein4.1e-1941.25Show/hide
Query:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTNDDNNNNN---
        M + DP  G+AF+ ++  FLF  I  GG CL+ Y ILP   +  WL  +G+  VCLPWFFWILTF YR++SR  GFR+ +    + NN N +    +   
Subjt:  MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTNDDNNNNN---

Query:  --SSGERPRCDARDQIEE---------NGNNDNQRQSNLSSNNSITSRESEIPLPISMGS
           S E P  D  + I            GN   +R S  SSN++I S ESE+PL ISM S
Subjt:  --SSGERPRCDARDQIEE---------NGNNDNQRQSNLSSNNSITSRESEIPLPISMGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGGTCGATCCCTCAGTTGGACGTGCATTCGTATGGATCGTCTTTTTTTTTCTCTTCTTCTGCATTCTCAGTGGTGGAGCTTGCCTTTTGGTGTACATA
ATCCTACCGGAGACCGAAATTACCACATGGCTACCAGTCGTTGGCTTGTCGTTGGTCTGTCTCCCTTGGTTCTTTTGGATCTTGACCTTCTTCTATAGAGTCATC
TCGCGTGCATGTGGTTTTCGAGTCTCCCTTGCCATGGCCACGAGTGCAAATAATACGAACGACGACAACAACAATAATAATTCGTCTGGTGAACGCCCTCGATGC
GATGCAAGGGATCAGATAGAGGAGAATGGCAACAATGACAATCAAAGGCAAAGCAATTTGTCGTCCAACAACTCGATAACGTCTCGTGAGAGTGAAATTCCATTA
CCCATATCAATGGGGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGGTCGATCCCTCAGTTGGACGTGCATTCGTATGGATCGTCTTTTTTTTTCTCTTCTTCTGCATTCTCAGTGGTGGAGCTTGCCTTTTGGTGTACATA
ATCCTACCGGAGACCGAAATTACCACATGGCTACCAGTCGTTGGCTTGTCGTTGGTCTGTCTCCCTTGGTTCTTTTGGATCTTGACCTTCTTCTATAGAGTCATC
TCGCGTGCATGTGGTTTTCGAGTCTCCCTTGCCATGGCCACGAGTGCAAATAATACGAACGACGACAACAACAATAATAATTCGTCTGGTGAACGCCCTCGATGC
GATGCAAGGGATCAGATAGAGGAGAATGGCAACAATGACAATCAAAGGCAAAGCAATTTGTCGTCCAACAACTCGATAACGTCTCGTGAGAGTGAAATTCCATTA
CCCATATCAATGGGGTCGTAA
Protein sequenceShow/hide protein sequence
MSLVDPSVGRAFVWIVFFFLFFCILSGGACLLVYIILPETEITTWLPVVGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANNTNDDNNNNNSSGERPRC
DARDQIEENGNNDNQRQSNLSSNNSITSRESEIPLPISMGS