; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh20G010610 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh20G010610
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionGamma-secretase subunit PEN-2
Genome locationCma_Chr20:7999324..8003743
RNA-Seq ExpressionCmaCh20G010610
SyntenyCmaCh20G010610
Gene Ontology termsGO:0007219 - Notch signaling pathway (biological process)
GO:0005798 - Golgi-associated vesicle (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070765 - gamma-secretase complex (cellular component)
InterPro domainsIPR019379 - Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571347.1 putative gamma-secretase subunit PEN-2, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6898.51Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSN NPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLT
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLT
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLT

KAG7011118.1 putative gamma-secretase subunit PEN-2 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-7097.81Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSN NPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVL S SFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_022931973.1 probable gamma-secretase subunit PEN-2 [Cucurbita moschata]7.0e-7198.54Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSN NPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_022971629.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]2.8e-72100Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_038900346.1 probable gamma-secretase subunit PEN-2 [Benincasa hispida]4.4e-6591.37Show/hide
Query:  MENSQ--NSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMA
        ME+SQ  N+N+N NPNP RIQN VSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGF VFMA
Subjt:  MENSQ--NSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMA

Query:  IISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        IISSWALTF+IGGERLFG VWDKLVMYNLAD+LGLTGWS
Subjt:  IISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

TrEMBL top hitse value%identityAlignment
A0A0A0LK38 Uncharacterized protein2.2e-6288.32Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
        ME  QN N+N N NP    N +SSPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGF VFMAII
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADK+GLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A5A7THJ9 Putative gamma-secretase subunit PEN-21.4e-6187.59Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
        ME S N N+N N NP    N ++SPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGF V MAII
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1F097 probable gamma-secretase subunit PEN-23.4e-7198.54Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSN NPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1G5B2 probable gamma-secretase subunit PEN-21.3e-6289.13Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFAVFMAI
        ME+SQN N+N N NP RIQN VSS IA LWPTID SLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR S SFPRIRPYIVGSAIGFA+FMAI
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFAVFMAI

Query:  ISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        ISSWALTF+IGGERLFGPVW+KLVMYNLADKLGLTGWS
Subjt:  ISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1I943 probable gamma-secretase subunit PEN-21.4e-72100Show/hide
Query:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

SwissProt top hitse value%identityAlignment
Q5G235 Gamma-secretase subunit PEN-26.7e-0834.41Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF +++ ++S+W   F     +++ P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY

Q6QI68 Gamma-secretase subunit PEN-21.9e-0733.33Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF  ++ ++++W   F     +++ P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY

Q9CQR7 Gamma-secretase subunit PEN-21.5e-0734.41Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF  ++ I+++W   F     +++ P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY

Q9FY84 Probable gamma-secretase subunit PEN-21.0e-4870.45Show/hide
Query:  QNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFAVFMAIISSW
        +N N N NPNP  +  ++SS  A +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V SAIGF+VF A++S+W
Subjt:  QNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFAVFMAIISSW

Query:  ALTFAIGGERLFGPVWDKLVMYNLADKLGLTG
        ALTF+IGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  ALTFAIGGERLFGPVWDKLVMYNLADKLGLTG

Q9NZ42 Gamma-secretase subunit PEN-28.7e-0834.41Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P    +S  +I+ Y+  SA+GF  ++ +++SW   F     +++ P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY

Arabidopsis top hitse value%identityAlignment
AT5G09310.1 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).7.2e-5070.45Show/hide
Query:  QNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFAVFMAIISSW
        +N N N NPNP  +  ++SS  A +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR Y+V SAIGF+VF A++S+W
Subjt:  QNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPYIVGSAIGFAVFMAIISSW

Query:  ALTFAIGGERLFGPVWDKLVMYNLADKLGLTG
        ALTF+IGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  ALTFAIGGERLFGPVWDKLVMYNLADKLGLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACTCGCAGAATTCGAACAGCAATCTAAACCCTAATCCGATTCGCATCCAGAATCTTGTATCGTCGCCGATTGCTGTGTTATGGCCGACAATTGATGGC
TCACTCGGGCTGTCGGAGGAAGAATCGGTGAGCTATGCCCGCAGATTCTATAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTC
TGGCCAGTTCTTCGCTCTCGCTCATTTCCTCGCATTCGTCCCTATATTGTTGGCTCAGCTATTGGTTTTGCTGTTTTCATGGCCATTATCTCGTCTTGGGCCTTG
ACATTTGCCATTGGAGGAGAACGCCTCTTTGGACCTGTTTGGGATAAACTAGTGATGTACAACCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTGCCTAAAACTTCGGTTGGTCTTTGTGTTCAGAGTCATTGAAACTTGATTGCAATGGAGAACTCGCAGAATTCGAACAGCAATCTAAACCCTAATCCGATT
CGCATCCAGAATCTTGTATCGTCGCCGATTGCTGTGTTATGGCCGACAATTGATGGCTCACTCGGGCTGTCGGAGGAAGAATCGGTGAGCTATGCCCGCAGATTC
TATAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCAGTTCTTCGCTCTCGCTCATTTCCTCGCATTCGTCCCTATATT
GTTGGCTCAGCTATTGGTTTTGCTGTTTTCATGGCCATTATCTCGTCTTGGGCCTTGACATTTGCCATTGGAGGAGAACGCCTCTTTGGACCTGTTTGGGATAAA
CTAGTGATGTACAACCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCATTCCTTCAGCAACCAACTTCGAACTTGTTCTTGTATATTTTAAG
ATGTGTAACTCTCTACTGTCATTCTTTTCTTGAAATATCAAAGTTGAAGCTTTTAGTTTCACTTCTCTAAGTGCTTCAAGTGTCAAACATAAACATAGAAGGGAT
CTTATATCGAACATAATTGAAATGAACAATATCAGGTTAAACAAACCCATGGTTTAAAGAACACTTGAACTTTAACAAACCCATGGTCAAATGCACACGTTTTGA
AACGGTTCTCCCTGCAGCTGCGTCGACAGAGTTCTGTGGATTGAATTCTAAACTGGTTATCTGAAATTCTCCTTTGCTTCCCTTTTCTCCCACTTTCAATACTAT
AAGCTGTGCTCTGTTTTCTGATTCCCTAC
Protein sequenceShow/hide protein sequence
MENSQNSNSNLNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFAVFMAIISSWAL
TFAIGGERLFGPVWDKLVMYNLADKLGLTGWS