CuGenDBv2

Gene ID	Cmc00g0001461
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ATP synthase subunit c, chloroplastic
Genome location	CMiso1.1chr00:1480991..1481149
RNA-Seq Expression	Cmc00g0001461
Synteny	Cmc00g0001461
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0031966 - mitochondrial membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0008289 - lipid binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ARV78259.1 ATP synthase CF0 C subunit [Aneura pinguis]

4.2e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

QTT78499.1 ATP synthase CF0 C subunit [Andreaea rupestris var. fauriei]

4.2e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

YP_009682225.1 ATP synthase CF0 subunit III [Fissidens nobilis]

4.2e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

YP_009867495.1 ATP synthase CF0 subunit III [Cratoneuron filicinum]

4.2e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

YP_009988672.1 ATP synthase III subunit [Myuroclada maximowiczii]

4.2e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

TrEMBL top hits

e value

%identity

Alignment

A0A0U2SNX2 ATP synthase subunit c, chloroplastic

2.0e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

A0A0U2UJ76 ATP synthase subunit c, chloroplastic

2.0e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

A0A218KG23 ATP synthase subunit c, chloroplastic

2.0e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

A0A482CGV6 ATP synthase F0 sector subunit C

2.0e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

U6A3L6 ATP synthase F0 sector subunit C

2.0e-16

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

SwissProt top hits

e value

%identity

Alignment

B0Z4N0 ATP synthase subunit c, chloroplastic

5.4e-19

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

B0Z4W4 ATP synthase subunit c, chloroplastic

5.4e-19

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

P62480 ATP synthase subunit c, chloroplastic

5.4e-19

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

P62481 ATP synthase subunit c, chloroplastic

5.4e-19

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

Q6WQW2 ATP synthase subunit c, chloroplastic

5.4e-19

100

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

Arabidopsis top hits

e value

%identity

Alignment

ATCG00140.1 ATP synthase subunit C family protein

6.6e-20

96.15

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Query:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT
        MNPL+SAASVIAAGLAVGLASIGPG+GQGTAAGQAVEGIARQPEAEGKIRGT
Subjt:  MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

Sequences

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CDS sequence

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ATGAATCCACTGATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGGATTGGTCAAGGTACTGCTGCGGGCCAAGCTGTAGA
AGGGATCGCGAGACAACCCGAGGCGGAGGGAAAAATCCGAGGTACTTGA

mRNA sequence

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ATGAATCCACTGATTTCTGCCGCTTCCGTTATTGCTGCTGGGTTGGCCGTCGGGCTTGCTTCTATTGGACCTGGGATTGGTCAAGGTACTGCTGCGGGCCAAGCTGTAGA
AGGGATCGCGAGACAACCCGAGGCGGAGGGAAAAATCCGAGGTACTTGA

Protein sequence

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MNPLISAASVIAAGLAVGLASIGPGIGQGTAAGQAVEGIARQPEAEGKIRGT

Cmc00g0001461 (gene) of Melon (Charmono) v1.1 genome