; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0006571 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0006571
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr01:2348809..2349454
RNA-Seq ExpressionCmc01g0006571
SyntenyCmc01g0006571
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-9596.76Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-9596.76Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.0e-9596.22Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYF+GLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-9596.76Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

TYK12316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.2e-9596.76Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

TrEMBL top hitse value%identityAlignment
A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-945.7e-9696.76Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

A0A5A7UVX4 Retrovirus-related Pol polyprotein from transposon TNT 1-949.7e-9696.22Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYF+GLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-945.7e-9696.76Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-945.7e-9696.76Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

A0A5D3DWU7 Retrovirus-related Pol polyprotein from transposon TNT 1-945.7e-9696.76Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDS TFSTPLDPNVRLTPFDGVPLED TLYRQLVGSLI
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YLT+TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL  +L
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.5e-2132Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDL-TLYRQLVGSL
        ++I   D   +++ + YL + F M DL  + +F+G+ I       YLSQ+ Y   +L++  + +    STPL   +     +    ED  T  R L+G L
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDL-TLYRQLVGSL

Query:  IYLTM-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHWLMLLQN
        +Y+ + TRPD+  AV+I+S++ +   +  +  + R+LRY+KGT+   L F    +    + G+ D+DWAG   DR+STTGY F +    N++ W    QN
Subjt:  IYLTM-TRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSL--VLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHWLMLLQN

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.3e-2439.22Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEI--SSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRL------TPFDGVPLEDLTLY
        M+I G D   I+ L+  L K F+MKDLG     LG++I    +S   +LSQ KY   +L R  + ++   STPL  +++L      T  +         Y
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEI--SSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRL------TPFDGVPLEDLTLY

Query:  RQLVGSLIY-LTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHWL
           VGSL+Y +  TRPDIA+AV +VS+F+  P   H+ AV  ILRY++GT G  L F   S  +L G++DAD AGD  +R+S+TGY F    S   + W 
Subjt:  RQLVGSLIY-LTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHWL

Query:  MLLQ
          LQ
Subjt:  MLLQ

P92519 Uncharacterized mitochondrial protein AtMg008101.7e-3643.68Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        +++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA  +LN +G+ D    STPL P    +        D + +R +VG+L 
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHW
        YLT+TRPDI+YAV+IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRSTTG+C +L    NI+ W
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.7e-3644.75Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        ++ITG+DP  + +    L + F +KD   L+YFLG+E     +G +LSQ +Y  DLL R+ +  +   +TP+ P+ +L+ + G  L D T YR +VGSL 
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL
        YL  TRPDI+YAV+ +SQFM  P   H  A+ RILRY+ GT  HG+     ++L L  +SDADWAGD  D  ST GY  YL
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.7e-3341.99Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        ++ITG+D   +      L + F +K+  +L+YFLG+E      G +LSQ +Y  DLL R+ +  +   +TP+  + +LT   G  L D T YR +VGSL 
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL
        YL  TRPD++YAV+ +SQ+M  P   H+ A+ R+LRY+ GT  HG+     ++L L  +SDADWAGD  D  ST GY  YL
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.3e-3945.41Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        +II  ++  A+ +L+  L   F+++DLG L YFLGLEI+ S++G  + Q KYA DLL+ +G+      S P+DP+V  +   G    D   YR+L+G L+
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL
        YL +TR DI++AV+ +SQF  APR  H  AV++IL YIKGT+G GL +SSQ+ + L  FSDA +      RRST GYC +L  SL
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSL

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.6e-1851.9Show/hide
Query:  IYLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYC
        +YLT+TRPD+ +AV+ +SQF +A RT    AV ++L Y+KGT+G GL +S+ S L L  F+D+DWA  P  RRS TG+C
Subjt:  IYLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.2e-3743.68Show/hide
Query:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI
        +++TG     ++ L   L   F MKDLG ++YFLG++I +  SG +LSQ KYA  +LN +G+ D    STPL P    +        D + +R +VG+L 
Subjt:  MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLI

Query:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHW
        YLT+TRPDI+YAV+IV Q M  P    F  + R+LRY+KGT+ HGL     S L +  F D+DWAG  + RRSTTG+C +L    NI+ W
Subjt:  YLTMTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGCAATCTCAACTATTTTCTTGGT
CTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTACCACTTTCTCAACA
CCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCTCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTATGACT
CGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAATTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGT
ACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCAGGTGATCCTACTGATAGACGGTCTACCACT
GGCTATTGCTTCTATCTAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTATTACAGGTGATGACCCTCAAGCCATATCTGATTTGCAATGTTACCTGGGTAAGCATTTTGAGATGAAGGACTTAGGCAATCTCAACTATTTTCTTGGT
CTTGAGATCTCCTCATCATCTAGTGGCTACTATTTATCTCAAGCAAAATATGCGTCTGACCTCCTCAATCGATCTGGTATTACTGATTCTACCACTTTCTCAACA
CCTCTGGATCCGAATGTGCGTCTCACTCCTTTTGATGGTGTTCCCCTTGAAGATCTCACTTTGTATAGGCAACTAGTTGGCAGCCTAATTTACCTAACTATGACT
CGTCCAGATATTGCGTATGCAGTTCATATTGTTAGTCAATTCATGGCTGCCCCTCGTACAATTCACTTCACTGCCGTCCTTCGCATTCTTCGCTACATCAAAGGT
ACTTTGGGTCATGGTCTACAGTTCTCCTCCCAATCCTCCCTGGTTCTCTCTGGTTTCTCTGATGCTGATTGGGCAGGTGATCCTACTGATAGACGGTCTACCACT
GGCTATTGCTTCTATCTAGCACAGAGTCTGAATATCGTGCACTGGCTGATGCTACTTCAGAATTAA
Protein sequenceShow/hide protein sequence
MIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLNRSGITDSTTFSTPLDPNVRLTPFDGVPLEDLTLYRQLVGSLIYLTMT
RPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGFSDADWAGDPTDRRSTTGYCFYLAQSLNIVHWLMLLQN