CuGenDBv2

Gene ID	Cmc01g0008401
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	glucosidase 2 subunit beta
Genome location	CMiso1.1chr01:3318205..3320356
RNA-Seq Expression	Cmc01g0008401
Synteny	Cmc01g0008401
Gene Ontology terms	GO:0006491 - N-glycan processing (biological process) GO:0016020 - membrane (cellular component) GO:0017177 - glucosidase II complex (cellular component)
InterPro domains	IPR028146 - Glucosidase II beta subunit, N-terminal IPR039794 - Glucosidase II beta subunit-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144515.1 glucosidase 2 subunit beta [Cucumis sativus]

4.8e-54

97.3

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
        MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKS ND+STTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALT FAILIWANR
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR

Query:  CRVKSKRRRHR
        CRVKSKRRRHR
Subjt:  CRVKSKRRRHR

XP_008455474.1 PREDICTED: glucosidase 2 subunit beta isoform X1 [Cucumis melo]

1.5e-55

100

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
        MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR

Query:  CRVKSKRRRHR
        CRVKSKRRRHR
Subjt:  CRVKSKRRRHR

XP_008455476.1 PREDICTED: glucosidase 2 subunit beta isoform X2 [Cucumis melo]

1.5e-55

100

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
        MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR

Query:  CRVKSKRRRHR
        CRVKSKRRRHR
Subjt:  CRVKSKRRRHR

XP_022952390.1 glucosidase 2 subunit beta [Cucurbita moschata]

1.4e-45

83.04

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN-MYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWAN
        MGSTPRF+FSSRVNDHICDCCDGSDEY+GNIFCPNTCVMGGN  YK++  +ST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQVALT FA+LIWAN
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN-MYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWAN

Query:  RCRVKSKRRRHR
        RCR KSKRRRHR
Subjt:  RCRVKSKRRRHR

XP_038887466.1 glucosidase 2 subunit beta [Benincasa hispida]

3.9e-48

88.5

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN-MYKSNNDVSTTRDVDIVI-RKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWA
        MGSTPRFIFSSRVND ICDCCDGSDEY+GNIFCPNTCVMGGN +YKSNND+STTRDVDI++ RKV+EEIT+ED+FQKL GLKLVIILQVALT FAILIWA
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN-MYKSNNDVSTTRDVDIVI-RKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWA

Query:  NRCRVKSKRRRHR
        NRCRVKSKRRRHR
Subjt:  NRCRVKSKRRRHR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K1G3 PRKCSH-like domain-containing protein

2.3e-54

97.3

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
        MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKS ND+STTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALT FAILIWANR
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR

Query:  CRVKSKRRRHR
        CRVKSKRRRHR
Subjt:  CRVKSKRRRHR

A0A1S3C149 glucosidase 2 subunit beta isoform X2

7.2e-56

100

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
        MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR

Query:  CRVKSKRRRHR
        CRVKSKRRRHR
Subjt:  CRVKSKRRRHR

A0A1S4E0C8 glucosidase 2 subunit beta isoform X1

7.2e-56

100

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
        MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR

Query:  CRVKSKRRRHR
        CRVKSKRRRHR
Subjt:  CRVKSKRRRHR

A0A5D3BIQ3 Glucosidase 2 subunit beta isoform X1

7.2e-56

100

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
        MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANR

Query:  CRVKSKRRRHR
        CRVKSKRRRHR
Subjt:  CRVKSKRRRHR

A0A6J1GLM3 glucosidase 2 subunit beta

6.8e-46

83.04

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN-MYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWAN
        MGSTPRF+FSSRVNDHICDCCDGSDEY+GNIFCPNTCVMGGN  YK++  +ST+RDVD++ RKVKEEITKEDLF +L GLKLVIILQVALT FA+LIWAN
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGN-MYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWAN

Query:  RCRVKSKRRRHR
        RCR KSKRRRHR
Subjt:  RCRVKSKRRRHR

SwissProt top hits

e value

%identity

Alignment

A2WNF5 Glucosidase 2 subunit beta

2.2e-09

41.57

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Query:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMY--KSNNDVSTTRDVDIV----IRKVKEEITKEDL-FQKLTGLKLVI
        G +P  IFSSRVND ICDCCDGSDEY+ N+ C NTC   G     K    V+T +   ++    I+K K    K++    KL G + ++
Subjt:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMY--KSNNDVSTTRDVDIV----IRKVKEEITKEDL-FQKLTGLKLVI

O08795 Glucosidase 2 subunit beta

9.2e-08

52.17

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Query:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSN
        G  P +I SSRVND +CDCCDG+DEY     C NTC   G   K +
Subjt:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSN

P14314 Glucosidase 2 subunit beta

3.5e-07

58.33

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Query:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTC
        G  P +I S+RVND +CDCCDG+DEY   + C NTC
Subjt:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTC

Q5NBP9 Glucosidase 2 subunit beta

2.2e-09

41.57

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Query:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMY--KSNNDVSTTRDVDIV----IRKVKEEITKEDL-FQKLTGLKLVI
        G +P  IFSSRVND ICDCCDGSDEY+ N+ C NTC   G     K    V+T +   ++    I+K K    K++    KL G + ++
Subjt:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMY--KSNNDVSTTRDVDIV----IRKVKEEITKEDL-FQKLTGLKLVI

Q9FM96 Glucosidase 2 subunit beta

8.9e-11

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Query:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSN-NDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLK
        G +P  +FSSRVND ICDCCDGSDEY+G++ C NTC   G   + N      T +  +VIR+ + E  K  L +    LK
Subjt:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSN-NDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLK

Arabidopsis top hits

e value

%identity

Alignment

AT2G42390.1 protein kinase C substrate, heavy chain-related

4.7e-23

44.83

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Query:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKV---KEEIT---KEDLFQKLTGLKLVIILQVALTIFAI
        +GS+P+F++SSRVND ICDCCDGSDEYE +I CPNTC+MGGN+       +  + + + +      KE  T    +D+ + L G+KLV  LQ+    F +
Subjt:  MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKV---KEEIT---KEDLFQKLTGLKLVIILQVALTIFAI

Query:  LIWANRCRVKSKRRRH
        ++W  R R +SKRRR+
Subjt:  LIWANRCRVKSKRRRH

AT5G56360.1 calmodulin-binding protein

6.3e-12

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Query:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSN-NDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLK
        G +P  +FSSRVND ICDCCDGSDEY+G++ C NTC   G   + N      T +  +VIR+ + E  K  L +    LK
Subjt:  GSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSN-NDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAAGTACACCGCGGTTTATTTTTTCTTCCCGTGTCAACGATCATATATGTGATTGCTGTGATGGAAGTGATGAATATGAGGGTAATATCTTTTGCCCGAAC
ACTTGCGTCATGGGGGGGAATATGTACAAGAGCAACAACGATGTTTCAACTACTCGAGATGTTGATATAGTCATCAGAAAAGTTAAGGAAGAAATCACTAAGGAG
GACTTGTTCCAAAAGCTAACTGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTTACAATTTTTGCAATCCTCATTTGGGCAAACCGTTGTCGTGTGAAATCT
AAGAGAAGACGACACCGTTGA

mRNA sequence

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GGCCAGAAGATCAAGATGGACTGTTTTTCTGCGTAGGCTCCCAAAATCTATTCCCTCCTTATCGTAGACTCTTTCCGGTACATCTGCCTGTGCAAGAGGGAAATT
CTATTGTCGGAATATGGGAAGTACACCGCGGTTTATTTTTTCTTCCCGTGTCAACGATCATATATGTGATTGCTGTGATGGAAGTGATGAATATGAGGGTAATAT
CTTTTGCCCGAACACTTGCGTCATGGGGGGGAATATGTACAAGAGCAACAACGATGTTTCAACTACTCGAGATGTTGATATAGTCATCAGAAAAGTTAAGGAAGA
AATCACTAAGGAGGACTTGTTCCAAAAGCTAACTGGTTTGAAGCTAGTAATAATCCTACAGGTAGCTCTTACAATTTTTGCAATCCTCATTTGGGCAAACCGTTG
TCGTGTGAAATCTAAGAGAAGACGACACCGTTGAAGCGAGCGGCAATCGTCATTCCTTAATCTTCACTGTAATCCCAAGTAAATTTTCCTGTTCCATATATAACT
TCTCTAGGCTATCCTCGTAGTCTAAATTGTTTATCAATCAATATCCATTCATTCTCCAAGCTTCTCTTATCAGCACCGGTTTCATGATGTCGTTTCTTTCAGGCG
CTCACAAAGCTCAACACACTGGATAAAGAACTCCTGATCCATTAATCTTAACAAACCATGATATTTTAGCTGCCTAAACCCAACCTTGGTTATATATATATAAAG
ATCACAACAACACGATGGATTACCTACCCAATCTATATCAATTTTGTAACATTTGGGCTAGATTCACTCAATGTATCATATATCAGAGAGACCAAATCTTGTTAC
AATATTTGTCTTGCACGACCTCAATAACTTTTGGCGAAGTTTGCAGCCTTTGATTATGCAATGAACCAAATGAAAGTTGTGTAAAAGTAAAATCTGGTGTACATG
AAAGAGGGGGGCAAATTCTCCAAAAATGGCAACTGGGGTCTCATTTTCAACCTCAAATTCATCCCTTCCCAATCGAAGATTCATGTAATGTTTTTTACATAGACT
GAGTGAAAAAATGTGTCAGCTTTTGACATATTACATTTGTTTGTTTGTTTTTTTTTTCTTTCCAAATTCTGTGTAAGGAGAGAGAGAGAAAATGGTTGGAATGGC
TGGCAGGCACTTGAAATTGTAAAG

Protein sequence

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MGSTPRFIFSSRVNDHICDCCDGSDEYEGNIFCPNTCVMGGNMYKSNNDVSTTRDVDIVIRKVKEEITKEDLFQKLTGLKLVIILQVALTIFAILIWANRCRVKS
KRRRHR

Cmc01g0008401 (gene) of Melon (Charmono) v1.1 genome