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Cmc01g0010081 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0010081
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionISWI chromatin-remodeling complex ATPase CHR11
Genome locationCMiso1.1chr01:4736648..4739984
RNA-Seq ExpressionCmc01g0010081
SyntenyCmc01g0010081
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0031491 - nucleosome binding (molecular function)
GO:0140658 - ATP-dependent chromatin remodeler activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033470.1 ISWI chromatin-remodeling complex ATPase CHR11 isoform X1 [Cucumis melo var. makuwa]1.1e-3490.8Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEKDENKFDFK IVSENWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

KAG6593949.1 ISWI chromatin-remodeling complex ATPase CHR11, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3490.8Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEKDENKFDFK IVSENWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

XP_008458481.1 PREDICTED: ISWI chromatin-remodeling complex ATPase CHR11 isoform X1 [Cucumis melo]1.1e-3490.8Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEKDENKFDFK IVSENWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

XP_016902813.1 PREDICTED: probable chromatin-remodeling complex ATPase chain [Cucumis melo]5.3e-40100Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

XP_022138478.1 ISWI chromatin-remodeling complex ATPase CHR11 isoform X2 [Momordica charantia]1.1e-3490.8Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEKDENKFDFK IVSENWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

TrEMBL top hitse value%identityAlignment
A0A1S4E3L1 probable chromatin-remodeling complex ATPase chain2.6e-40100Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

A0A5A7SRC8 ISWI chromatin-remodeling complex ATPase CHR11 isoform X15.5e-3590.8Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEKDENKFDFK IVSENWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

A0A6J1CB76 ISWI chromatin-remodeling complex ATPase CHR11 isoform X15.5e-3590.8Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEKDENKFDFK IVSENWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

A0A6J1CD32 ISWI chromatin-remodeling complex ATPase CHR11 isoform X25.5e-3590.8Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEKDENKFDFK IVSENWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

A0A6J1KIC1 ISWI chromatin-remodeling complex ATPase CHR115.5e-3590.8Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGEA TAELDAKMKKFTED IKFKMD TAELYDFDDEKDENKFDFK IVSENWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

SwissProt top hitse value%identityAlignment
F4JY24 ISWI chromatin-remodeling complex ATPase CHR171.0e-3077.27Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE
        MVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+ KDE+K DFK IVSENW +PP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE

O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 54.5e-1043.18Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIK-FKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        M+R GA  V +SK+S ITDEDID I+ +G   TAE++ K+ K  E  ++ F MD  + +Y+F+ E    K   + I    WIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIK-FKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

Q24368 Chromatin-remodeling complex ATPase chain Iswi1.2e-1045.16Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIK-FKMD-----GTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        ++RFGA  V SSK++ ITDEDID I+ +GEA TAE  A +    E  ++ F MD     GT+ +Y F+ E    K   K+    NWIEPP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIK-FKMD-----GTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

Q7G8Y3 Probable chromatin-remodeling complex ATPase chain1.8e-3585.06Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE
        MVRFGAEMV SSKDSTITDEDID+II KGE TTAELDAKMKKFTED IKFKMD TAELYDFDD+K+ENK DFK +VS+NWIEPP RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE

Q8RWY3 ISWI chromatin-remodeling complex ATPase CHR114.7e-3177.27Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE
        MVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+ KDENK DFK IVS+NW +PP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE

Arabidopsis top hitse value%identityAlignment
AT3G06400.1 chromatin-remodeling protein 113.3e-3277.27Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE
        MVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+ KDENK DFK IVS+NW +PP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE

AT3G06400.2 chromatin-remodeling protein 113.3e-3277.27Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE
        MVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+ KDENK DFK IVS+NW +PP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE

AT3G06400.3 chromatin-remodeling protein 111.1e-3075.56Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGT--AELYDFDDE-KDENKFDFKIIVSENWIEPPERE
        MVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +  A+ YDFDD+ KDENK DFK IVS+NW +PP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGT--AELYDFDDE-KDENKFDFKIIVSENWIEPPERE

AT5G18620.1 chromatin remodeling factor177.4e-3277.27Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE
        MVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+ KDE+K DFK IVSENW +PP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE

AT5G18620.2 chromatin remodeling factor177.4e-3277.27Show/hide
Query:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE
        MVR+GAEMV SSKDSTITDEDID+II KGE  TAELDAKMKKFTED I+FKMD +A+ YDFDD+ KDE+K DFK IVSENW +PP+RE
Subjt:  MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDE-KDENKFDFKIIVSENWIEPPERE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGTTTGGTGCTGAGATGGTTTGCAGTTCCAAAGATAGCACCATCACAGACGAGGACATTGACAAAATCATTGTTAAGGGAGAAGCAACAACTGCAGAGCTTGA
TGCAAAGATGAAGAAATTTACAGAAGATGTCATTAAATTTAAAATGGATGGAACTGCTGAATTGTACGATTTTGATGATGAAAAGGACGAGAATAAATTTGACTTCAAGA
TAATTGTCAGTGAAAATTGGATTGAACCACCTGAAAGAGAATAG
mRNA sequenceShow/hide mRNA sequence
CACCTTTTTCCCCCCTCAATTTCTTTCACGCAAACAGAAGCTCCTCCGTCCGCAACTATCCTCCGCCCGCAATTTTAATTTAGATTATTAAGCATTCAAAAAGTATGCGT
ATGCGACTCTTATTTGGTGCCTGGTGCCACGGTGGCTACCTTACTAATGCTTGGTGCACTTCATGCTCGTTGGCTATATGATGATAAGAAGGTATACTTTTATAGGGCTA
GTCTTTTGAACGATTAATTTCTTCCTGATAGAAATTGACAGACTTTTTAGTAACAAAAATAGGAAGAATCGATTTGTGATCGACGTTCTGAAATGGGTACTAAATAAAAG
GTTGGGCACAATCTCTGGACACTGCTTTGATACTCTACTTTTTCTAGATGCTATGGAACCAAAAACTCTGTCAACAAGGATGAGCTACTTCAAATGGTGAGGTTTGGTGC
TGAGATGGTTTGCAGTTCCAAAGATAGCACCATCACAGACGAGGACATTGACAAAATCATTGTTAAGGGAGAAGCAACAACTGCAGAGCTTGATGCAAAGATGAAGAAAT
TTACAGAAGATGTCATTAAATTTAAAATGGATGGAACTGCTGAATTGTACGATTTTGATGATGAAAAGGACGAGAATAAATTTGACTTCAAGATAATTGTCAGTGAAAAT
TGGATTGAACCACCTGAAAGAGAATAGAAGCGAAAAGCAAGGTTGCAAGATATGGAGATAATCAAAGAGGGACCATCAGCTTTTCATCCTCTTGTACTGAATGAAAAAAA
ATTACTCGTATTGGAAGCCTCGTACGATATTTTTTTTATTAAAACATTAAATGGAAGAGTGTGGAGAGCTCTCGTGGCTGGTTATGAACCTCCGACGATTACTGTGGATG
GTGTATCAATTTTGAAACCTGAGGTTAATTGGACTGATGTTGAAGAATAAGCATCAGTTGGGAATGCTAGAGCTCTAAATGCAATATTCAATTATGTAGACCTAAATGTG
TTCAAACTTATAAACTTTTGTAGTACAACCAAAAAAGCATGAAGAATATTGGAAGTTGCTTATG
Protein sequenceShow/hide protein sequence
MVRFGAEMVCSSKDSTITDEDIDKIIVKGEATTAELDAKMKKFTEDVIKFKMDGTAELYDFDDEKDENKFDFKIIVSENWIEPPERE