| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-64 | 96.18 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLS ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQ QEQKVCKLNRSIYGLKQASRSWNI FDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KV FLVLYVDDILLIGNDV YLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| KAA0050622.1 gag/pol protein [Cucumis melo var. makuwa] | 1.8e-68 | 100 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| KAA0054515.1 gag/pol protein [Cucumis melo var. makuwa] | 3.5e-64 | 94.66 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKS+RI LS ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFIT+ QEQKVCKLNRSIYGLKQASRSWNI FDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KV FLVLYVDDILLIGNDVRYLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-64 | 96.18 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLS ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQ QEQKVCKLNRSIYGLKQASRSWNI FDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KV FLVLYVDDILLIGNDV YLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 1.6e-64 | 96.18 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLS ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQ QEQKVCKLNRSIYGLKQASRSWNI FDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KV FLVLYVDDILLIGNDV YLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TZD0 Gag/pol protein | 7.7e-65 | 96.18 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLS ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQ QEQKVCKLNRSIYGLKQASRSWNI FDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KV FLVLYVDDILLIGNDV YLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| A0A5A7U480 Gag/pol protein | 8.8e-69 | 100 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| A0A5A7ULG4 Gag/pol protein | 1.7e-64 | 94.66 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKS+RI LS ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFIT+ QEQKVCKLNRSIYGLKQASRSWNI FDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KV FLVLYVDDILLIGNDVRYLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| A0A5A7UYE8 Gag/pol protein | 7.7e-65 | 96.18 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLS ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQ QEQKVCKLNRSIYGLKQASRSWNI FDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KV FLVLYVDDILLIGNDV YLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| A0A5D3CYF4 Gag/pol protein | 7.7e-65 | 96.18 | Show/hide |
Query: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
MLKSIRILLS ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQ QEQKVCKLNRSIYGLKQASRSWNI FDTAIKSYGFDQNVDEPCVYKKINKG
Subjt: MLKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
KV FLVLYVDDILLIGNDV YLTDVKAWLAA
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLAA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.9e-20 | 39.69 | Show/hide |
Query: LKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKGK
+ S R +LS Y+ ++ QMDVKTAFLNG L+E I+M P+G VCKLN++IYGLKQA+R W +F+ A+K F + + C+Y ++KG
Subjt: LKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKGK
Query: VP---FLVLYVDDILLIGNDVRYLTDVKAWL
+ +++LYVDD+++ D+ + + K +L
Subjt: VP---FLVLYVDDILLIGNDVRYLTDVKAWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.6e-28 | 46.92 | Show/hide |
Query: LKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVY-KKINKG
+ SIR +LS A D E+ Q+DVKTAFL+G+LEE I+M QPEGF ++ VCKLN+S+YGLKQA R W + FD+ +KS + + +PCVY K+ ++
Subjt: LKSIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVY-KKINKG
Query: KVPFLVLYVDDILLIGNDVRYLTDVKAWLA
L+LYVDD+L++G D + +K L+
Subjt: KVPFLVLYVDDILLIGNDVRYLTDVKAWLA
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| P25600 Putative transposon Ty5-1 protein YCL074W | 7.3e-12 | 34.29 | Show/hide |
Query: MDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKGKVPFLVLYVDDILLIGNDVRY
MDV TAFLN ++E I++ QP GF+ + V +L +YGLKQA WN + +K GF ++ E +Y + ++ +YVDD+L+ +
Subjt: MDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKGKVPFLVLYVDDILLIGNDVRY
Query: LTDVK
VK
Subjt: LTDVK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.3e-20 | 40.87 | Show/hide |
Query: SIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKGKVP
SIRI+L A + I Q+DV AFL G L + ++MSQP GFI +D+ VCKL +++YGLKQA R+W + + + GF +V + ++ +
Subjt: SIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKGKVP
Query: FLVLYVDDILLIGND
++++YVDDIL+ GND
Subjt: FLVLYVDDILLIGND
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-20 | 40 | Show/hide |
Query: SIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKGKVP
SIRI+L A + I Q+DV AFL G L + ++MSQP GF+ +D+ VC+L ++IYGLKQA R+W + T + + GF ++ + ++ +
Subjt: SIRILLSFATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQDQEQKVCKLNRSIYGLKQASRSWNIMFDTAIKSYGFDQNVDEPCVYKKINKGKVP
Query: FLVLYVDDILLIGND
++++YVDDIL+ GND
Subjt: FLVLYVDDILLIGND
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