| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037097.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa] | 8.5e-182 | 87.07 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
M KTW++QDEGFLIECRAIQV ENEQ++TA EPLQN+LKQF DVF WPE+LPPRR IEHQIHLKEGTNPINVRPYRYGFQQKAEME+LVEEML
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SGIIRPSNSPFSS VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EELFDELNGATVFSKIDLKSGY+QIRM+D+DIPKTAFRTHEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN PATFQALMN+IFRPFLRKFVLVFFDDILIYSKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K+EYLGH+ISGEGVEVDS+KIK V DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYYR+FVQHYGSIAAPLTQLLKKGGFKW+E+++++F
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| KAA0046241.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-182 | 90.23 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
MFKTW+DQDEGFLIECRAIQVCEENEQ+NT V+ EAE LQ MLKQF DVF WPEKL PRR+IEHQIHLKEGTNPINVRPYRYGFQ KAEMEKLVEEMLT
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SGI FSSLVLLVKKKDGSWRFCVDY AVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGY+QIRMVD+DIPKTAFRTHEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN PATFQALMNNIF+PFLRKFVLVFFDDIL YSKNEKDHVEHIEKVFLTLRRHALFANKKKC+FGQQKIEYLGHVISGEGVEV SEKIK DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYYR+FVQHYGSIAAPLTQLLKKGGFKWSEE+EKAF
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| KAA0066183.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.7e-178 | 85.63 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
MFKTW+DQDEGFLIECRA++VCEE EQ +T TV E +Q MLKQF DVF WP+K+PPRRKIEH IHLKEGTNPINVRPY YG+QQKAEMEKLVEEML+
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SG+IRPSNSPF S VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIP+VEELFDELNGATVFSKIDLKSGY+QIRMVDEDIPKTAF THEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN P TFQALMN IF+P+LRKFVLVFFDDILIYSK+E+DH+EHIE+VFL LRRHALFANKKKC+F QQKIEYLGHVISGEGVEVD +KIK V DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYY +FVQHYGSIAAPLTQLLKKGGFKW+EE+E+AF
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| TYK02195.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-182 | 87.36 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
M KTW++QDEGFLIECRA+QV ENEQ++TA EPLQN+LKQF DVF WPE+LPPRR IEHQIHLKEGTNPINVRPYRYGFQQKAEME+LVEEML
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SGIIRPSNSPFSS VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EELFDELNGATVFSKIDLKSGY+QIRM+D+DIPKTAFRTHEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN PATFQALMN+IFRPFLRKFVLVFFDDILIYSKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K+EYLGH+ISGEGVEVDSEKIK V DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYYR+FVQHYGSIAAPLTQLLKKGGFKW+E++E++F
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| TYK18957.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-182 | 90.23 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
MFKTW+DQDEGFLIECRAIQVCEENEQ+NT V+ EAE LQ MLKQF DVF WPEKL PRR+IEHQIHLKEGTNPINVRPYRYGFQ KAEMEKLVEEMLT
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SGI FSSLVLLVKKKDGSWRFCVDY AVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGY+QIRMVD+DIPKTAFRTHEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN PATFQALMNNIF+PFLRKFVLVFFDDIL YSKNEKDHVEHIEKVFLTLRRHALFANKKKC+FGQQKIEYLGHVISGEGVEV SEKIK DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYYR+FVQHYGSIAAPLTQLLKKGGFKWSEE+EKAF
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T6B1 Transposon Ty3-G Gag-Pol polyprotein | 4.1e-182 | 87.07 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
M KTW++QDEGFLIECRAIQV ENEQ++TA EPLQN+LKQF DVF WPE+LPPRR IEHQIHLKEGTNPINVRPYRYGFQQKAEME+LVEEML
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SGIIRPSNSPFSS VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EELFDELNGATVFSKIDLKSGY+QIRM+D+DIPKTAFRTHEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN PATFQALMN+IFRPFLRKFVLVFFDDILIYSKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K+EYLGH+ISGEGVEVDS+KIK V DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYYR+FVQHYGSIAAPLTQLLKKGGFKW+E+++++F
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| A0A5A7TY09 Ty3/gypsy retrotransposon protein | 8.3e-183 | 90.23 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
MFKTW+DQDEGFLIECRAIQVCEENEQ+NT V+ EAE LQ MLKQF DVF WPEKL PRR+IEHQIHLKEGTNPINVRPYRYGFQ KAEMEKLVEEMLT
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SGI FSSLVLLVKKKDGSWRFCVDY AVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGY+QIRMVD+DIPKTAFRTHEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN PATFQALMNNIF+PFLRKFVLVFFDDIL YSKNEKDHVEHIEKVFLTLRRHALFANKKKC+FGQQKIEYLGHVISGEGVEV SEKIK DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYYR+FVQHYGSIAAPLTQLLKKGGFKWSEE+EKAF
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| A0A5D3BSP2 Ty3/gypsy retrotransposon protein | 6.4e-183 | 87.36 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
M KTW++QDEGFLIECRA+QV ENEQ++TA EPLQN+LKQF DVF WPE+LPPRR IEHQIHLKEGTNPINVRPYRYGFQQKAEME+LVEEML
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SGIIRPSNSPFSS VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EELFDELNGATVFSKIDLKSGY+QIRM+D+DIPKTAFRTHEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN PATFQALMN+IFRPFLRKFVLVFFDDILIYSKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K+EYLGH+ISGEGVEVDSEKIK V DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYYR+FVQHYGSIAAPLTQLLKKGGFKW+E++E++F
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| A0A5D3CTJ7 Ty3/gypsy retrotransposon protein | 2.8e-178 | 85.63 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
MFKTW+DQDEGFLIECRA++VCEE EQ +T TV E +Q MLKQF DVF WP+K+PPRRKIEH IHLKEGTNPINVRPY YG+QQKAEMEKLVEEML+
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SG+IRPSNSPF S VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIP+VEELFDELNGATVFSKIDLKSGY+QIRMVDEDIPKTAF THEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN P TFQALMN IF+P+LRKFVLVFFDDILIYSK+E+DH+EHIE+VFL LRRHALFANKKKC+F QQKIEYLGHVISGEGVEVD +KIK V DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYY +FVQHYGSIAAPLTQLLKKGGFKW+EE+E+AF
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| A0A5D3D5W7 Ty3/gypsy retrotransposon protein | 8.3e-183 | 90.23 | Show/hide |
Query: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
MFKTW+DQDEGFLIECRAIQVCEENEQ+NT V+ EAE LQ MLKQF DVF WPEKL PRR+IEHQIHLKEGTNPINVRPYRYGFQ KAEMEKLVEEMLT
Subjt: MFKTWLDQDEGFLIECRAIQVCEENEQTNTATVIHEAEPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLT
Query: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
SGI FSSLVLLVKKKDGSWRFCVDY AVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGY+QIRMVD+DIPKTAFRTHEGHYEFLVMPFG
Subjt: SGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFG
Query: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
LTN PATFQALMNNIF+PFLRKFVLVFFDDIL YSKNEKDHVEHIEKVFLTLRRHALFANKKKC+FGQQKIEYLGHVISGEGVEV SEKIK DWPCPT
Subjt: LTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPT
Query: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
NIRE+RGFLGLTGYYR+FVQHYGSIAAPLTQLLKKGGFKWSEE+EKAF
Subjt: NIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKAF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 4.4e-64 | 40.85 | Show/hide |
Query: EAEPLQNMLKQFGDVFYWP-EKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLV-KKKDGS----WRFCV
E + L +L+++ D+ Y +KL + +H I+ K + Y ++Q E+E +++ML GIIR SNSP++S + +V KK+D S +R +
Subjt: EAEPLQNMLKQFGDVFYWP-EKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLV-KKKDGS----WRFCV
Query: DYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFD
DYR +N T+ D+ PIP ++E+ +L F+ IDL G++QI M E + KTAF T GHYE+L MPFGL N PATFQ MN+I RP L K LV+ D
Subjt: DYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFD
Query: DILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPL
DI+++S + +H++ + VF L + L KC F +Q+ +LGHV++ +G++ + EKI+ + +P PT +EI+ FLGLTGYYRKF+ ++ IA P+
Subjt: DILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPL
Query: TQLLKK
T+ LKK
Subjt: TQLLKK
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 3.3e-67 | 42.81 | Show/hide |
Query: EAEPLQNMLKQFGDVFYWP-EKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLVKKKD-----GSWRFCV
E L+ +L +F ++ Y EKL I+H ++ +PI + Y + E+E V+EML G+IR SNSP++S +V KK +R +
Subjt: EAEPLQNMLKQFGDVFYWP-EKLPPRRKIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLVKKKD-----GSWRFCV
Query: DYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFD
DYR +N TIPD++PIP ++E+ +L F+ IDL G++QI M +E I KTAF T GHYE+L MPFGL N PATFQ MNNI RP L K LV+ D
Subjt: DYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFD
Query: DILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPL
DI+I+S + +H+ I+ VF L L KC F +++ +LGH+++ +G++ + K+K +V +P PT +EIR FLGLTGYYRKF+ +Y IA P+
Subjt: DILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPL
Query: TQLLKK
T LKK
Subjt: TQLLKK
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 4.5e-61 | 39.73 | Show/hide |
Query: LPPRR------KIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE
LPPR ++H I +K G ++PY + + E+ K+V+++L + I PS SP SS V+LV KKDG++R CVDYR +N ATI D FP+P ++
Subjt: LPPRR------KIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE
Query: LFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFL
L + A +F+ +DL SGY+QI M +D KTAF T G YE+ VMPFGL N P+TF M + FR +FV V+ DDILI+S++ ++H +H++ V
Subjt: LFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFL
Query: TLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKA
L+ L KKKC F ++ E+LG+ I + + K + D+P P +++ + FLG+ YYR+F+ + IA P+ QL +W+E+ +KA
Subjt: TLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKA
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 9.2e-62 | 37.38 | Show/hide |
Query: EPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTN---PINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLVKKK-----DGSWRFCV
E L ++L +F +F P +E + + TN PI + Y Y + E+E+ ++E+L GIIRPSNSP++S + +V KK + +R V
Subjt: EPLQNMLKQFGDVFYWPEKLPPRRKIEHQIHLKEGTN---PINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLVKKK-----DGSWRFCV
Query: DYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFD
D++ +N TIPD +PIP + L A F+ +DL SG++QI M + DIPKTAF T G YEFL +PFGL N PA FQ ++++I R + K V+ D
Subjt: DYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFD
Query: DILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPL
DI+++S++ H +++ V +L + L N +K +F ++E+LG++++ +G++ D +K++ + + P PT+++E++ FLG+T YYRKF+Q Y +A PL
Subjt: DILIYSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPL
Query: TQLLK
T L +
Subjt: TQLLK
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 4.5e-61 | 39.73 | Show/hide |
Query: LPPRR------KIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE
LPPR ++H I +K G ++PY + + E+ K+V+++L + I PS SP SS V+LV KKDG++R CVDYR +N ATI D FP+P ++
Subjt: LPPRR------KIEHQIHLKEGTNPINVRPYRYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSLVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE
Query: LFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFL
L + A +F+ +DL SGY+QI M +D KTAF T G YE+ VMPFGL N P+TF M + FR +FV V+ DDILI+S++ ++H +H++ V
Subjt: LFDELNGATVFSKIDLKSGYNQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNGPATFQALMNNIFRPFLRKFVLVFFDDILIYSKNEKDHVEHIEKVFL
Query: TLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKA
L+ L KKKC F ++ E+LG+ I + + K + D+P P +++ + FLG+ YYR+F+ + IA P+ QL +W+E+ +KA
Subjt: TLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKTVVDWPCPTNIREIRGFLGLTGYYRKFVQHYGSIAAPLTQLLKKGGFKWSEESEKA
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