| GenBank top hits | e value | %identity | Alignment |
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| KAA0055610.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.7e-82 | 92.02 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
MYSYDTTP LVGYCDADWAGSADDRKST GGCFF NNLISWLSKKQNCVSLST EAEYIAAGSGCTQLIWMKNMLHEYGFDQ+ MTLYCD+ SAIDI K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVCRT
NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQL +IFTKPL+ASSFEYLRAGLGVCRT
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVCRT
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| KAA0056181.1 uncharacterized protein E6C27_scaffold431G00070 [Cucumis melo var. makuwa] | 5.2e-65 | 86.39 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
MYSYD TPTL GYCDADWAGSADDRKST GGCFF NNLIS LSKKQN VSLS AEAEYIAAGSGCTQLIWMKNMLHEY FDQ+ M LYCD+MSAIDI K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLN
N VQHSRTK+IDIRHHFIRELVEDKVIKLDHIRSNLQL +IFT PL+
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLN
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| MCH85254.1 putative gag-pol polyprotein [Trifolium medium] | 7.5e-64 | 73.29 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
+YSY P+L GYCDADWAGSADDRKST GGCFF NNLISW SKKQNCVSLSTAEAEYIAAGS C+QL+WMK M+ EY DQN +TLYCD++SAI+I K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVC
NP+QHSRTKHIDIRHHFIR+LVE VI L+H+ + QLA+IFTK L+A FEYLR LG+C
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVC
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| TYK03343.1 uncharacterized protein E5676_scaffold206G00060 [Cucumis melo var. makuwa] | 5.2e-65 | 86.39 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
MYSYD TPTL GYCDADWAGSADDRKST GGCFF NNLIS LSKKQN VSLS AEAEYIAAGSGCTQLIWMKNMLHEY FDQ+ M LYCD+MSAIDI K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLN
N VQHSRTK+IDIRHHFIRELVEDKVIKLDHIRSNLQL +IFT PL+
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLN
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| TYK23188.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 8.0e-66 | 86.71 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
MYSYDTTPTLVGYCDADWAG ADDRKST GGCFF NNLI WLSKKQNCVSLST EAEYI AGSGCTQLIWM+N+L EYGFDQ+ +TLY D+MSAIDI K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFT
NPVQHSR KHIDIRHHFIRELVEDKVI+LDHIRSNLQLA+IFT
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFT
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A392MG88 Putative gag-pol polyprotein | 3.6e-64 | 73.29 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
+YSY P+L GYCDADWAGSADDRKST GGCFF NNLISW SKKQNCVSLSTAEAEYIAAGS C+QL+WMK M+ EY DQN +TLYCD++SAI+I K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVC
NP+QHSRTKHIDIRHHFIR+LVE VI L+H+ + QLA+IFTK L+A FEYLR LG+C
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVC
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| A0A5A7URM6 Reverse transcriptase Ty1/copia-type domain-containing protein | 2.5e-65 | 86.39 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
MYSYD TPTL GYCDADWAGSADDRKST GGCFF NNLIS LSKKQN VSLS AEAEYIAAGSGCTQLIWMKNMLHEY FDQ+ M LYCD+MSAIDI K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLN
N VQHSRTK+IDIRHHFIRELVEDKVIKLDHIRSNLQL +IFT PL+
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLN
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| A0A5D3BUJ1 Reverse transcriptase Ty1/copia-type domain-containing protein | 2.5e-65 | 86.39 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
MYSYD TPTL GYCDADWAGSADDRKST GGCFF NNLIS LSKKQN VSLS AEAEYIAAGSGCTQLIWMKNMLHEY FDQ+ M LYCD+MSAIDI K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLN
N VQHSRTK+IDIRHHFIRELVEDKVIKLDHIRSNLQL +IFT PL+
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLN
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| A0A5D3DI97 Gag-pol polyprotein | 3.9e-66 | 86.71 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
MYSYDTTPTLVGYCDADWAG ADDRKST GGCFF NNLI WLSKKQNCVSLST EAEYI AGSGCTQLIWM+N+L EYGFDQ+ +TLY D+MSAIDI K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFT
NPVQHSR KHIDIRHHFIRELVEDKVI+LDHIRSNLQLA+IFT
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFT
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| A0A5D3DLL1 Gag-pol polyprotein | 2.3e-82 | 92.02 | Show/hide |
Query: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
MYSYDTTP LVGYCDADWAGSADDRKST GGCFF NNLISWLSKKQNCVSLST EAEYIAAGSGCTQLIWMKNMLHEYGFDQ+ MTLYCD+ SAIDI K
Subjt: MYSYDTTPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFK
Query: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVCRT
NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQL +IFTKPL+ASSFEYLRAGLGVCRT
Subjt: NPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVCRT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 7.4e-30 | 46.41 | Show/hide |
Query: LVGYCDADWAGSADDRKSTFGGCF-FFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFD-QNIMTLYCDSMSAIDIFKNPVQHSR
++GY D+DWAGS DRKST G F F NLI W +K+QN V+ S+ EAEY+A + +W+K +L +N + +Y D+ I I NP H R
Subjt: LVGYCDADWAGSADDRKSTFGGCF-FFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFD-QNIMTLYCDSMSAIDIFKNPVQHSR
Query: TKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGV
KHIDI++HF RE V++ VI L++I + QLA+IFTKPL A+ F LR LG+
Subjt: TKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGV
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| P0CV72 Secreted RxLR effector protein 161 | 1.7e-10 | 45.45 | Show/hide |
Query: TPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWM
T LVGY DADWAG + R+ST G F +SW SKKQ V+LS+ E EY+A + +W+
Subjt: TPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.8e-35 | 48.37 | Show/hide |
Query: PTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFKNPVQHSR
P L GY DAD AG D+RKS+ G F F ISW SK Q CV+LST EAEYIAA ++IW+K L E G Q +YCDS SAID+ KN + H+R
Subjt: PTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFDQNIMTLYCDSMSAIDIFKNPVQHSR
Query: TKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGV
TKHID+R+H+IRE+V+D+ +K+ I +N A++ TK + + FE + +G+
Subjt: TKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.2e-25 | 39.49 | Show/hide |
Query: TPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFD-QNIMTLYCDSMSAIDIFKNPVQH
T +L Y DADWAG DD ST G + ++ ISW SKKQ V S+ EAEY + + +++ W+ ++L E G +YCD++ A + NPV H
Subjt: TPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFD-QNIMTLYCDSMSAIDIFKNPVQH
Query: SRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVCR
SR KHI I +HFIR V+ +++ H+ ++ QLA+ TKPL+ ++F+ + +GV R
Subjt: SRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVCR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.3e-25 | 38.85 | Show/hide |
Query: TPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFD-QNIMTLYCDSMSAIDIFKNPVQH
T +L Y DADWAG DD ST G + ++ ISW SKKQ V S+ EAEY + + ++L W+ ++L E G + +YCD++ A + NPV H
Subjt: TPTLVGYCDADWAGSADDRKSTFGGCFFFRNNLISWLSKKQNCVSLSTAEAEYIAAGSGCTQLIWMKNMLHEYGFD-QNIMTLYCDSMSAIDIFKNPVQH
Query: SRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVCR
SR KHI + +HFIR V+ +++ H+ ++ QLA+ TKPL+ +F+ +GV +
Subjt: SRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLANIFTKPLNASSFEYLRAGLGVCR
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