| GenBank top hits | e value | %identity | Alignment |
|---|
| TYJ96309.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| TYK03241.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| TYK06895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| TYK08113.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| TYK18362.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.7e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SJX6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| A0A5A7V308 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| A0A5A7V3X9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| A0A5D3D497 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| A0A5D3D557 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-74 | 88.68 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDVKS FLNGYLEEEVYLEQPP YSVKGQEDK+LKL K L GLKQAPRMWNSRINKYFLDN YLRC YEHSL IK +GHGDILVVCLYV+DLI TGNCAS
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
MF+DLKKAMTQEF+MTDIGLMSYYL IEVKQSEEGIFISQE+YTREILEKFNM+NSKPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-21 | 33.54 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGH-GDILVVCLYVNDLIITGNCA
MDVK+ FLNG L+EE+Y+ P S D + KLNK + GLKQA R W + + E++ + + I G+ + + V LYV+D++I
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGH-GDILVVCLYVNDLIITGNCA
Query: SMFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPVT
+ + K+ + ++F+MTD+ + +++ I ++ E+ I++SQ Y ++IL KFNM N V+
Subjt: SMFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPVT
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.5e-27 | 35.8 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
+DVK+ FL+G LEEE+Y+EQP + V G++ + KLNK+L GLKQAPR W + + + YL+ + + K + +++ LYV+D++I G
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEV--KQSEEGIFISQEQYTREILEKFNMINSKPVT
+ LK +++ F M D+G L +++ +++ +++SQE+Y +LE+FNM N+KPV+
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEV--KQSEEGIFISQEQYTREILEKFNMINSKPVT
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| P25600 Putative transposon Ty5-1 protein YCL074W | 4.7e-16 | 29.41 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
MDV + FLN ++E +Y++QPP + + D + +L + GLKQAP +WN IN + R EH L ++ G I + +YV+DL++
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEG-IFISQEQYTREI----------LEKFNMINSKPV
++ +K+ +T+ + M D+G + +L + + QS G I +S + Y + L + + NSKP+
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEG-IFISQEQYTREI----------LEKFNMINSKPV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-23 | 35.62 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
+DV + FL G L ++VY+ QPP + K + + + KL K L GLKQAPR W + Y L ++ + + SL + G I+ + +YV+D++ITGN +
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPVT
+ + ++Q F + D + Y+L IE K+ G+ +SQ +Y ++L + NMI +KPVT
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPVT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.4e-25 | 35.85 | Show/hide |
Query: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
+DV + FL G L +EVY+ QPP + K + D + +L K + GLKQAPR W + Y L ++ + + SL + G I+ + +YV+D++ITGN
Subjt: MDVKSVFLNGYLEEEVYLEQPPSYSVKGQEDKILKLNKTLSGLKQAPRMWNSRINKYFLDNEYLRCLYEHSLCIKTDGHGDILVVCLYVNDLIITGNCAS
Query: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
+ K A++Q F + + + Y+L IE K+ +G+ +SQ +YT ++L + NM+ +KPV
Subjt: MFKDLKKAMTQEFKMTDIGLMSYYLAIEVKQSEEGIFISQEQYTREILEKFNMINSKPV
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