; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0010461 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0010461
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionS-protein homolog
Genome locationCMiso1.1chr01:5464498..5464938
RNA-Seq ExpressionCmc01g0010461
SyntenyCmc01g0010461
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050661.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]4.3e-87100Show/hide
Query:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
        MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
Subjt:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW

Query:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
Subjt:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

KAA0050687.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]3.0e-7282.88Show/hide
Query:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
        MMRNVV+LWLAT V+VEG+VS+W KPPP+PSRYFV+VVNGLSY SLDVHCQSK+DDLGYHHLVN GD +QWNFEEN +GTTLFWCRLEK DAYVAFESFW
Subjt:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW

Query:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        PE+ N WLRDRCGNQGTC+W AKDDGIYLRN+P NVDE VHKWI K
Subjt:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

XP_008462110.1 PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo]6.7e-7282.76Show/hide
Query:  MRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWP
        MRNVV+LWLAT V+VEG+VS+W KPPP+PSRYFV+VVNGLSY SLDVHCQSK+DDLGYHHLVN GD +QWNFEEN +GTTLFWCRLEK DAYVAFESFWP
Subjt:  MRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWP

Query:  ETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        E+ N WLRDRCGNQGTC+W AKDDGIYLRN+P NVDE VHKWI K
Subjt:  ETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

XP_008462115.1 PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo]1.8e-80100Show/hide
Query:  MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRC
        MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRC
Subjt:  MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRC

Query:  GNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        GNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
Subjt:  GNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

XP_016903452.1 PREDICTED: uncharacterized protein LOC103503421 [Cucumis melo]1.1e-7991.78Show/hide
Query:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
        MMRNVVVLWLA MVLVEG+VSKW KPPP PSRYFVHVVNGLSYQSLDVHCQSK+DDLGYH LV +GDE+QWNFEEN WGTTLFWCRLEKPDAYVAFESFW
Subjt:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW

Query:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        PETKNVWLR RCGNQGTCIWTAKDDGIYLRNMPTN DEFVHKWIPK
Subjt:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

TrEMBL top hitse value%identityAlignment
A0A1S3CG61 S-protein homolog8.6e-81100Show/hide
Query:  MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRC
        MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRC
Subjt:  MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRC

Query:  GNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        GNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
Subjt:  GNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

A0A1S4E5F6 S-protein homolog5.5e-8091.78Show/hide
Query:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
        MMRNVVVLWLA MVLVEG+VSKW KPPP PSRYFVHVVNGLSYQSLDVHCQSK+DDLGYH LV +GDE+QWNFEEN WGTTLFWCRLEKPDAYVAFESFW
Subjt:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW

Query:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        PETKNVWLR RCGNQGTCIWTAKDDGIYLRNMPTN DEFVHKWIPK
Subjt:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

A0A5A7U8H6 S-protein homolog1.5e-7282.88Show/hide
Query:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
        MMRNVV+LWLAT V+VEG+VS+W KPPP+PSRYFV+VVNGLSY SLDVHCQSK+DDLGYHHLVN GD +QWNFEEN +GTTLFWCRLEK DAYVAFESFW
Subjt:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW

Query:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        PE+ N WLRDRCGNQGTC+W AKDDGIYLRN+P NVDE VHKWI K
Subjt:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

A0A5A7UAS6 S-protein homolog2.1e-87100Show/hide
Query:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
        MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
Subjt:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW

Query:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
Subjt:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

A0A5D3DIG9 S-protein homolog5.5e-8091.78Show/hide
Query:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW
        MMRNVVVLWLA MVLVEG+VSKW KPPP PSRYFVHVVNGLSYQSLDVHCQSK+DDLGYH LV +GDE+QWNFEEN WGTTLFWCRLEKPDAYVAFESFW
Subjt:  MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFW

Query:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK
        PETKNVWLR RCGNQGTCIWTAKDDGIYLRNMPTN DEFVHKWIPK
Subjt:  PETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 68.4e-0930.3Show/hide
Query:  LDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWI
        L VHC+S++DD G+ H++ +G  Y W F  N   +TL++C   +          +   ++     RC N   C W AK+DGIY        +   +KW+
Subjt:  LDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWI

F4JLS0 S-protein homolog 18.1e-2043.59Show/hide
Query:  PKPSRYFVHVVNGLSY-QSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDG
        PK S + V VVNGL+  ++L +HC+SK DDLG  +L  R + + WNF EN+  +T FWC + K + ++    FW +   V L  RCG +  CIWTAK DG
Subjt:  PKPSRYFVHVVNGLSY-QSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDG

Query:  IYLRNMPTNVDEFVHKW
        +YL N  +  D    KW
Subjt:  IYLRNMPTNVDEFVHKW

Q2HQ46 S-protein homolog 741.2e-1841.88Show/hide
Query:  PKPSRYFVHVVNGLSY-QSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDG
        PK S + V V NGL+  ++L +HC+SK +DLG  +L    D + WNF EN+  +TLFWC + K D ++  + FW +   V L  RC +   C+WTAK+DG
Subjt:  PKPSRYFVHVVNGLSY-QSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDG

Query:  IYLRNMPTNVDEFVHKW
        +YL N     D    KW
Subjt:  IYLRNMPTNVDEFVHKW

Q9FI84 S-protein homolog 272.4e-0836.89Show/hide
Query:  LDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEK-PDAYVAFESFWPETKNVWLRD--RCGNQGTCIWTAKDDGIY-LRNMPTNVDEFVH
        L +HC+SK+DDLG+ H+   G+ Y W F  N   +TL++C   +  D    F+    E      RD  RC N   C W AK D +Y   N+P  V  F  
Subjt:  LDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEK-PDAYVAFESFWPETKNVWLRD--RCGNQGTCIWTAKDDGIY-LRNMPTNVDEFVH

Query:  KWI
        KW+
Subjt:  KWI

Q9LW22 S-protein homolog 216.4e-0938.55Show/hide
Query:  LDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIY
        L VHC+SKN+D+G  +L   G+   ++F+ N WGTT FWC L K   Y  +       + + L  + G+     W A+DDGIY
Subjt:  LDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIY

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family1.1e-1133.62Show/hide
Query:  VHVVNGL----SYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVW-LRDRCGNQGTCIWTAKDDGIYL
        +H+ N L     +  L V C+S   D+G H+ V  G  YQ++  +N W TTLFWC       Y   + F     +V+  +      GT  WTA++DGIY 
Subjt:  VHVVNGL----SYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVW-LRDRCGNQGTCIWTAKDDGIYL

Query:  RNMPTNVDEFVHKWIP
        R     + + VH W P
Subjt:  RNMPTNVDEFVHKWIP

AT4G16295.1 S-protein homologue 15.8e-2143.59Show/hide
Query:  PKPSRYFVHVVNGLSY-QSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDG
        PK S + V VVNGL+  ++L +HC+SK DDLG  +L  R + + WNF EN+  +T FWC + K + ++    FW +   V L  RCG +  CIWTAK DG
Subjt:  PKPSRYFVHVVNGLSY-QSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDG

Query:  IYLRNMPTNVDEFVHKW
        +YL N  +  D    KW
Subjt:  IYLRNMPTNVDEFVHKW

AT4G29035.1 Plant self-incompatibility protein S1 family8.3e-2041.88Show/hide
Query:  PKPSRYFVHVVNGLSY-QSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDG
        PK S + V V NGL+  ++L +HC+SK +DLG  +L    D + WNF EN+  +TLFWC + K D ++  + FW +   V L  RC +   C+WTAK+DG
Subjt:  PKPSRYFVHVVNGLSY-QSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDG

Query:  IYLRNMPTNVDEFVHKW
        +YL N     D    KW
Subjt:  IYLRNMPTNVDEFVHKW

AT5G04347.1 Plant self-incompatibility protein S1 family2.2e-1236.36Show/hide
Query:  VVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEK-PD--AYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMP
        V N L+ + L V C+SK+D+LG  H++  G   + NF++N+W  TLFWC L K PD   +VAF+++    ++ W  D  G +   +W A++DGIY    P
Subjt:  VVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEK-PD--AYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIYLRNMP

Query:  TNVDEFVHKW
            +  + W
Subjt:  TNVDEFVHKW

AT5G04350.1 Plant self-incompatibility protein S1 family5.4e-1134.83Show/hide
Query:  LDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEK-PD-----AYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIY
        L VHC+SK+DDLG  H++  G +Y++ F +N+W TT F C++++ P+      +VA+E+ W +            + +C W  ++DGIY
Subjt:  LDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEK-PD-----AYVAFESFWPETKNVWLRDRCGNQGTCIWTAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGAAATGTGGTCGTTTTGTGGCTTGCCACAATGGTTTTAGTTGAGGGTGAAGTTTCGAAGTGGTTGAAACCTCCACCGAAACCTTCGAGGTATTTTGTTCATGT
GGTAAATGGGCTAAGCTACCAAAGTTTAGATGTGCATTGCCAATCCAAGAACGATGATTTGGGATATCATCATTTGGTTAACCGTGGAGATGAGTACCAATGGAACTTTG
AAGAAAACCTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAAAAGCCGGATGCATATGTCGCTTTTGAAAGCTTTTGGCCTGAAACAAAGAACGTTTGGCTTCGTGAT
AGATGCGGGAATCAAGGAACTTGTATTTGGACTGCTAAAGACGATGGAATTTATTTGAGAAACATGCCTACTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAATA
A
mRNA sequenceShow/hide mRNA sequence
ATGATGAGAAATGTGGTCGTTTTGTGGCTTGCCACAATGGTTTTAGTTGAGGGTGAAGTTTCGAAGTGGTTGAAACCTCCACCGAAACCTTCGAGGTATTTTGTTCATGT
GGTAAATGGGCTAAGCTACCAAAGTTTAGATGTGCATTGCCAATCCAAGAACGATGATTTGGGATATCATCATTTGGTTAACCGTGGAGATGAGTACCAATGGAACTTTG
AAGAAAACCTTTGGGGAACAACCTTGTTTTGGTGTAGATTGGAAAAGCCGGATGCATATGTCGCTTTTGAAAGCTTTTGGCCTGAAACAAAGAACGTTTGGCTTCGTGAT
AGATGCGGGAATCAAGGAACTTGTATTTGGACTGCTAAAGACGATGGAATTTATTTGAGAAACATGCCTACTAATGTTGATGAATTTGTTCACAAATGGATCCCTAAATA
A
Protein sequenceShow/hide protein sequence
MMRNVVVLWLATMVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRD
RCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKWIPK