| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 3.0e-266 | 89.19 | Show/hide |
Query: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Query: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
MFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Subjt: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Query: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
QKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Subjt: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Query: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
VENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFI
Subjt: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
Query: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
YKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTK PFT
Subjt: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
Query: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
GKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 3.0e-266 | 89.19 | Show/hide |
Query: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Query: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
MFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Subjt: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Query: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
QKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Subjt: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Query: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
VENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFI
Subjt: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
Query: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
YKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTK PFT
Subjt: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
Query: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
GKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 3.0e-266 | 89.19 | Show/hide |
Query: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Query: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
MFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Subjt: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Query: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
QKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Subjt: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Query: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
VENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFI
Subjt: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
Query: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
YKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTK PFT
Subjt: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
Query: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
GKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| KAA0062993.1 gag/pol protein [Cucumis melo var. makuwa] | 4.2e-268 | 88.95 | Show/hide |
Query: VFSNLILTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREI
VF NLI+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLV+ECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREI
Subjt: VFSNLILTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREI
Query: MDSLQEMFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFES
MDSLQEMFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFES
Subjt: MDSLQEMFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFES
Query: LMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL
LMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL
Subjt: LMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL
Query: VLETCLVENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFN
VLETCLVENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFN
Subjt: VLETCLVENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFN
Query: VNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKM
VNKVFIYKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKM
Subjt: VNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKM
Query: TKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
TK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: TKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 8.7e-266 | 89.01 | Show/hide |
Query: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Query: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
MFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Subjt: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Query: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
QKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Subjt: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Query: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
VENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFI
Subjt: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
Query: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
YKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTK PFT
Subjt: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
Query: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
GKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 1.4e-266 | 89.19 | Show/hide |
Query: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Query: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
MFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Subjt: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Query: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
QKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Subjt: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Query: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
VENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFI
Subjt: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
Query: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
YKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTK PFT
Subjt: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
Query: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
GKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| A0A5A7TWB9 Gag/pol protein | 1.4e-266 | 89.19 | Show/hide |
Query: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Query: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
MFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Subjt: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Query: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
QKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Subjt: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Query: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
VENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFI
Subjt: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
Query: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
YKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTK PFT
Subjt: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
Query: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
GKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| A0A5A7UGV2 Gag/pol protein | 1.4e-266 | 89.19 | Show/hide |
Query: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Query: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
MFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Subjt: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Query: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
QKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Subjt: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Query: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
VENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFI
Subjt: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
Query: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
YKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTK PFT
Subjt: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
Query: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
GKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| A0A5A7V4M1 Gag/pol protein | 2.0e-268 | 88.95 | Show/hide |
Query: VFSNLILTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREI
VF NLI+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLV+ECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREI
Subjt: VFSNLILTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREI
Query: MDSLQEMFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFES
MDSLQEMFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFES
Subjt: MDSLQEMFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFES
Query: LMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL
LMKIKGQKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL
Subjt: LMKIKGQKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLL
Query: VLETCLVENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFN
VLETCLVENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFN
Subjt: VLETCLVENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFN
Query: VNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKM
VNKVFIYKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKM
Subjt: VNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKM
Query: TKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
TK PFTGKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: TKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| A0A5D3CPJ6 Gag/pol protein | 4.2e-266 | 89.01 | Show/hide |
Query: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
+TS TLNMLAADKLNGNNYASWKN INTVLIIDDLRFVLVEECPQVPAANATRT+REPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Subjt: LTSVTLNMLAADKLNGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQE
Query: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
MFGQASYQIKHD LKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESL ESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Subjt: MFGQASYQIKHDPLKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKG
Query: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
QKGEANVATSTRKFHRG TSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Subjt: QKGEANVATSTRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Query: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
VENDDSAWIIDS +SW R+ G + F LLENVYVVP+LKRNLISVKCLLEQSYSLTFNVNKVFI
Subjt: VENDDSAWIIDS----------DDDASW------NWACRLSN-------CSGSASTLFTEIFSLLENVYVVPNLKRNLISVKCLLEQSYSLTFNVNKVFI
Query: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
YKNGVEICSAKLENNLYVLR+LTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRL HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTK PFT
Subjt: YKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKIPFT
Query: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
GKG R KEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
Subjt: GKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 3.0e-19 | 22.91 | Show/hide |
Query: NGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPL
+G YA WK I +L D+ V+ P E + W KA A++ I+ LS+ S +TAR+I+++L ++ + S +
Subjt: NGNNYASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDPL
Query: KYIYNARMNEGASVRE--HVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTR
K + + +++ S+ H+ + ++ +A GA I+E ++S +L + L S A+ LT + + + +KIK + +
Subjt: KYIYNARMNEGASVRE--HVLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTR
Query: KFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKG------ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDS
H + N +K NL + TK K KG C HC +EGH K++C Y K+ K + +
Subjt: KFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKG------ICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDS
Query: AWIIDSDDDASWNWACRLSNCSGSASTLFTEIFSLLENVYVVPNLK--------------------------------------RNLISVKCLLEQSYSL
A+++ ++ S C SG++ L + ++V VVP LK NL+SVK L E S+
Subjt: AWIIDSDDDASWNWACRLSNCSGSASTLFTEIFSLLENVYVVPNLK--------------------------------------RNLISVKCLLEQSYSL
Query: TFNVNKVFIYKNGVEIC-SAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELE-----ENSLPV
F+ + V I KNG+ + ++ + NN+ V+ Q + K N LWH R HI+ ++ + + + S+ E S +
Subjt: TFNVNKVFIYKNGVEIC-SAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELE-----ENSLPV
Query: CESCLEGKMTKIPF--TGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
CE CL GK ++PF +K PL +VHSD+CGP+ YF+ F D ++ Y Y
Subjt: CESCLEGKMTKIPF--TGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.3e-26 | 25.86 | Show/hide |
Query: KLNGNN-YASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKH
K NG+N +++W+ + +LI L VL + + A E WA +E+A + I LS+ + TAR I L+ ++ + K
Subjt: KLNGNN-YASWKNIINTVLIIDDLRFVLVEECPQVPAANATRTIREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKH
Query: DPLKYIYNARMNEGASVREH--VLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVAT
K +Y M+EG + H V N ++ +A + G I+E + +L SL S+ + + K L + + L E + K +G+A +
Subjt: DPLKYIYNARMNEGASVREH--VLNMMVHFNVAEMNGAVIDEASQVSFILESLLESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVAT
Query: STRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYD-------------LLVL
RG +S SS N G G A K+ ++K+ C++CNQ GH+KR+CP K + K D +L +
Subjt: STRKFHRGLTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYD-------------LLVL
Query: ---ETCL-VENDDSAWIIDSDDD--------------ASWNWACRLSNCSGSASTLFTEI--------FSLLENVYVVPNLKRNLISVKCLLEQSYSLTF
E C+ + +S W++D+ A ++ N S S +I +L++V VP+L+ NLIS L Y F
Subjt: ---ETCL-VENDDSAWIIDSDDD--------------ASWNWACRLSNCSGSASTLFTEI--------FSLLENVYVVPNLKRNLISVKCLLEQSYSLTF
Query: NVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGK
K + K + I LY RT N E I Q + + + LWH R+ H++ ++ L K L+S + ++ C+ CL GK
Subjt: NVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVKNGLLSELEENSLPVCESCLEGK
Query: MTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
++ F R L+LV+SD+CGPM +++ GG +YF+TF DD SR +VY
Subjt: MTKIPFTGKGRRVKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| P25384 Transposon Ty2-C Gag-Pol polyprotein | 9.7e-10 | 27.81 | Show/hide |
Query: PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVK
PN+ +L+S+ L Q+ + F N +G + + Y L+ K L+ + + K I + K K L H L H N I++ +K
Subjt: PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVK
Query: NGLLSELEENSLP-------VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
++ L+E+ + C CL GK TK KG R+K EP + +H+D+ GP++ + YFI+FTD+ +R+ +VY
Subjt: NGLLSELEENSLP-------VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| Q12472 Transposon Ty2-DR1 Gag-Pol polyprotein | 9.7e-10 | 27.81 | Show/hide |
Query: PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVK
PN+ +L+S+ L Q+ + F N +G + + Y L+ K L+ + + K I + K K L H L H N I++ +K
Subjt: PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVK
Query: NGLLSELEENSLP-------VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
++ L+E+ + C CL GK TK KG R+K EP + +H+D+ GP++ + YFI+FTD+ +R+ +VY
Subjt: NGLLSELEENSLP-------VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 9.7e-10 | 27.81 | Show/hide |
Query: PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVK
PN+ +L+S+ L Q+ + F N +G + + Y L+ K L+ + + K I + K K L H L H N I++ +K
Subjt: PNLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRTLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLWHINLNRIERLVK
Query: NGLLSELEENSLP-------VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
++ L+E+ + C CL GK TK KG R+K EP + +H+D+ GP++ + YFI+FTD+ +R+ +VY
Subjt: NGLLSELEENSLP-------VCESCLEGKMTKIPFTGKGRRVK-----EPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVY
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