| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU46010.1 hypothetical protein TSUD_401320 [Trifolium subterraneum] | 1.1e-192 | 49.6 | Show/hide |
Query: GLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHW---SSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDI
GL ANLISISQLCDQG VNF T C+VTD+ ++ M G DNCY W S + C + K D+ LWH++LG+++L S+ K I EAI G+P L I
Subjt: GLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHW---SSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDI
Query: NGKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSD
CGDCQ+GKQTKT H+ L+ T RVLELLH+DL+GPMQ SLG K+Y VVV D+ ++TW+ F+K KSDT + LC+ LQR K + I+RI SD
Subjt: NGKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSD
Query: HGNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHI
HG EF + + F SEGI HEF++PIT QQNGVVERKNRTLQE A+ M+H K L +FW EA+NTAC+IHNRVT RSGTT TLYELWK RKP VKYFH+
Subjt: HGNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHI
Query: FGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVVIRQLES---------------------LPEGKRKLITS--------
FGS CYIL DRE RK D K D+GIFLGYS NSR Y+V+N ++ +ME+IN+V+ E L E + TS
Subjt: FGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVVIRQLES---------------------LPEGKRKLITS--------
Query: -------------------------------------------------VEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDE
V++AL DEYWINAMQEEL QFK N V LV +P+ VNVI TKW++KNK+DE
Subjt: -------------------------------------------------VEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDE
Query: SGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQAL
+GNVT+NKARLVAQGYA++EGVDFDETFA VA LE+IRLLL ++C KF+L+QMDVKSAFL+GYLN EVYV QPKGFVD P +VYKL KALYGLKQA
Subjt: SGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQAL
Query: RVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGF---------------------------------------------------
R WYERLT +L +GY +G +K LF+ LI+AQIYVDDIIFGG
Subjt: RVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGF---------------------------------------------------
Query: ------------PQTTTHAKITKDIVDTTIDHKLYRSMIGSLLYLTAA
TH K+TKD +D LY+SMIGSLLYLTA+
Subjt: ------------PQTTTHAKITKDIVDTTIDHKLYRSMIGSLLYLTAA
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| KAA0042206.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 5.6e-208 | 58.13 | Show/hide |
Query: CVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLT-KTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYT
C +T NN V G W K+S C++ T Q + KL +ISL SLDKVIRNEA+VGIPSLDINGKFFCGDCQVGKQTKTSHR LKECY
Subjt: CVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLT-KTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYT
Query: IRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPI
IRVLELLHLDL+GPMQTESL KKYVLVVV DY+ FTWVRFLK KSDT+KLCISLC+NLQR KG+KII++ SDHG EFD+E+LNNF +++GIHHEF API
Subjt: IRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPI
Query: TLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFL
T QQNGVVERKNRTLQEMA+VMIH NLPLNF EAVNT CHI + H TCYIL DREYHRKWDVK DQGIFL
Subjt: TLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFL
Query: GYSQNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEG-------------------------------KRKLITSV
GYS NSR Y+VFNIKSGTVME IN+VV + Q L+ +P+G K L +S+
Subjt: GYSQNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEG-------------------------------KRKLITSV
Query: --------------EKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEA
+ ALKDEYWIN MQEELLQFK NN+ TLV KPD N+I TKWIFKNKTDES +V +N+ARLVAQGYA+V+GVDF++TFA VARLEA
Subjt: --------------EKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEA
Query: IRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIV
IRLLLSISCFRKFKL+QMDVKSAFL+GYLN EVYVAQ K FVDS+FPQYVYK NKALYGLKQA R WYE+LTMYL ERGYSRGE +K LFINRTST LIV
Subjt: IRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIV
Query: AQIYVDDIIFGGFPQT---------------------------------------------------------------TTHAKITKDIVDTTIDHKLYR
AQIYVDDIIFGGFP+T THAKI KD VD +DHKLYR
Subjt: AQIYVDDIIFGGFPQT---------------------------------------------------------------TTHAKITKDIVDTTIDHKLYR
Query: SMIGSLLYLTAADLISPMLLEYVLGI
SMIGSLLYLTA S + YV+GI
Subjt: SMIGSLLYLTAADLISPMLLEYVLGI
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| KAA0042877.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 4.3e-216 | 58.16 | Show/hide |
Query: MDGLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDIN
+DGLKANLIS+SQLCDQGYSVNFNNTGCVVTD NNQVFMSG+R+ADNCYHW+S SNICHLTK QTWLWHRKLGYISL SLDKVI NEA+VGIPSLDIN
Subjt: MDGLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDIN
Query: GKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDH
GKFFCGDC+VGKQTKTSH+ LKECYTIRVL+LLHLDL+G MQTE +KII+I SDH
Subjt: GKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDH
Query: GNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIF
G EFD+E+LNNF ++EGIHHEFAAPIT QQNGVVERKNRTLQEMA+VMIH KNLPLNFW EAVNTACHIHNRVTTRS T VTL
Subjt: GNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIF
Query: GSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV------IRQLESLPEGKRKLITSVEKALKDEYWINAMQEELL-----
EYHRKWDVK DQGIFLGYSQNSR Y+VFNIKS TVMETIN++V + Q ++ + + + V DE Q +
Subjt: GSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV------IRQLESLPEGKRKLITSVEKALKDEYWINAMQEELL-----
Query: ---QFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYL
+FKCNNV TLV KPD N+I TKWIFKNKTDESG+V +NKARLVAQGYA+VEGVD DETFA VAR EAI LL SI+CFRKFKL+QMDVKSAFL+GYL
Subjt: ---QFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYL
Query: NVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQ--------------
N EVYVAQP+ FVD +FPQYVYKLNKALYGLKQA R WY+ LTMYLGERGYSRGET+K LFINRTSTDLIVAQIYVDDIIFGGFP+
Subjt: NVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQ--------------
Query: ------------------------------------------------TTTHAKITKD------------------------------------------
TTTHAKITKD
Subjt: ------------------------------------------------TTTHAKITKD------------------------------------------
Query: ---IVDTTIDHKLYRSMIGSLLYLTAADLISPMLLEYVLGI
IV T +DHK YRSMIGSLLYLTA S + YV+GI
Subjt: ---IVDTTIDHKLYRSMIGSLLYLTAADLISPMLLEYVLGI
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| KAA0054435.1 gag-pol polyprotein [Cucumis melo var. makuwa] | 3.5e-218 | 62.83 | Show/hide |
Query: VTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYTIRV
+TD NNQV MSGRR++DNCYHWSS SNICHLTK DQTWLWHRKLG+ISL SLDKVIRNEA+VGIPSLDIN KFFCGDCQVGKQTK+SH LKECYTIRV
Subjt: VTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYTIRV
Query: LELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPITLQ
LELLHLDL+GPMQTESLG KKYVLVVV DY +FTWV FLKGKSDT KLCISLCLNLQ KG+KIIRI SDH EFD+E+LNNF + EGIHHE AAPIT Q
Subjt: LELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPITLQ
Query: QNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFLGYS
QNGVVERKNRTLQEMA+VMIH KNLPLNFW EAVNTACHIHNRVTTRSGTTVTLYELWKGRKPN+
Subjt: QNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFLGYS
Query: QNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEGKRKLITSVEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDG
+R Y+VFNIKSGTVMETIN+VV I Q L+ +P+ TS+E ALKDEY IN MQEELLQFK NNV TLV KP+G
Subjt: QNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEGKRKLITSVEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDG
Query: VNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQ
N VEGVDFDETFA VARLEAIRLLLSISCFRKFKL+QM VKSAFL+GYLN EVYV QPKGFVD +FPQ
Subjt: VNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQ
Query: YVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQT--------------------------------
YVYKLNKALY LKQA + WYERLTMYLGER YSRGET+K LFINRTST+LIVAQIYVDDIIFGGFP+T
Subjt: YVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQT--------------------------------
Query: -------------------------------TTHAKITKDIVDTTIDHKLYRSMIGSLLYLTAADLISPMLLEYVLGI
THAKITKD+V T +DHKLYRSMIGSLLYLT S + YV+GI
Subjt: -------------------------------TTHAKITKDIVDTTIDHKLYRSMIGSLLYLTAADLISPMLLEYVLGI
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| TYK26041.1 gag/pol polyprotein [Cucumis melo var. makuwa] | 4.3e-200 | 61.57 | Show/hide |
Query: MDGLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDIN
+DGLK NLIS+SQLCDQGYSVNFNNT CV TD NNQVF+SGRR+A+NC HWSS SNICHLTK DQTWLWHRKLG+ISL SLDKVIRN+A+VGIPSLDIN
Subjt: MDGLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDIN
Query: GKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDH
GKFFCGDC+VGKQTK SHR LKECYTIRVLELLHLDLIGPM+TESLGRKKYVLVVV DY +FT VRFLKGKSDTVKLCISL LNLQR KG+KIIRI SDH
Subjt: GKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDH
Query: GNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIF
G EFD+E+LNNF ++EGIHHEF APIT QQNGVVERKNRT VTTRSGTT+ LYELWKGRKPNVKYFHIF
Subjt: GNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIF
Query: GSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEGKRK----------
GSTCYIL DR YHRKWDVK DQ IFLGYSQNSR Y+VFNIKS TVMETIN+VV + Q L+ +P+G +
Subjt: GSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEGKRK----------
Query: ----------LI------------------TSVEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYA
L+ TSVE ALKDEY INAMQEELLQFK NNV TLV KPD NVI TKWIFKNKTDESGN+
Subjt: ----------LI------------------TSVEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYA
Query: KVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYS
L+A + ++ CF K+ L +YVYKLNKALYGLKQA WYERLTMYLGERGYS
Subjt: KVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYS
Query: RGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQT
RGET+K +F+NRT+ DLIVAQIYVDDIIFGGFP+T
Subjt: RGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2Z6P936 Integrase catalytic domain-containing protein | 5.5e-193 | 49.6 | Show/hide |
Query: GLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHW---SSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDI
GL ANLISISQLCDQG VNF T C+VTD+ ++ M G DNCY W S + C + K D+ LWH++LG+++L S+ K I EAI G+P L I
Subjt: GLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHW---SSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDI
Query: NGKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSD
CGDCQ+GKQTKT H+ L+ T RVLELLH+DL+GPMQ SLG K+Y VVV D+ ++TW+ F+K KSDT + LC+ LQR K + I+RI SD
Subjt: NGKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSD
Query: HGNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHI
HG EF + + F SEGI HEF++PIT QQNGVVERKNRTLQE A+ M+H K L +FW EA+NTAC+IHNRVT RSGTT TLYELWK RKP VKYFH+
Subjt: HGNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHI
Query: FGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVVIRQLES---------------------LPEGKRKLITS--------
FGS CYIL DRE RK D K D+GIFLGYS NSR Y+V+N ++ +ME+IN+V+ E L E + TS
Subjt: FGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVVIRQLES---------------------LPEGKRKLITS--------
Query: -------------------------------------------------VEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDE
V++AL DEYWINAMQEEL QFK N V LV +P+ VNVI TKW++KNK+DE
Subjt: -------------------------------------------------VEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDE
Query: SGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQAL
+GNVT+NKARLVAQGYA++EGVDFDETFA VA LE+IRLLL ++C KF+L+QMDVKSAFL+GYLN EVYV QPKGFVD P +VYKL KALYGLKQA
Subjt: SGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQAL
Query: RVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGF---------------------------------------------------
R WYERLT +L +GY +G +K LF+ LI+AQIYVDDIIFGG
Subjt: RVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGF---------------------------------------------------
Query: ------------PQTTTHAKITKDIVDTTIDHKLYRSMIGSLLYLTAA
TH K+TKD +D LY+SMIGSLLYLTA+
Subjt: ------------PQTTTHAKITKDIVDTTIDHKLYRSMIGSLLYLTAA
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| A0A5D3C1P5 Gag-pol polyprotein | 2.1e-216 | 58.16 | Show/hide |
Query: MDGLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDIN
+DGLKANLIS+SQLCDQGYSVNFNNTGCVVTD NNQVFMSG+R+ADNCYHW+S SNICHLTK QTWLWHRKLGYISL SLDKVI NEA+VGIPSLDIN
Subjt: MDGLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDIN
Query: GKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDH
GKFFCGDC+VGKQTKTSH+ LKECYTIRVL+LLHLDL+G MQTE +KII+I SDH
Subjt: GKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDH
Query: GNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIF
G EFD+E+LNNF ++EGIHHEFAAPIT QQNGVVERKNRTLQEMA+VMIH KNLPLNFW EAVNTACHIHNRVTTRS T VTL
Subjt: GNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIF
Query: GSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV------IRQLESLPEGKRKLITSVEKALKDEYWINAMQEELL-----
EYHRKWDVK DQGIFLGYSQNSR Y+VFNIKS TVMETIN++V + Q ++ + + + V DE Q +
Subjt: GSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV------IRQLESLPEGKRKLITSVEKALKDEYWINAMQEELL-----
Query: ---QFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYL
+FKCNNV TLV KPD N+I TKWIFKNKTDESG+V +NKARLVAQGYA+VEGVD DETFA VAR EAI LL SI+CFRKFKL+QMDVKSAFL+GYL
Subjt: ---QFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYL
Query: NVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQ--------------
N EVYVAQP+ FVD +FPQYVYKLNKALYGLKQA R WY+ LTMYLGERGYSRGET+K LFINRTSTDLIVAQIYVDDIIFGGFP+
Subjt: NVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQ--------------
Query: ------------------------------------------------TTTHAKITKD------------------------------------------
TTTHAKITKD
Subjt: ------------------------------------------------TTTHAKITKD------------------------------------------
Query: ---IVDTTIDHKLYRSMIGSLLYLTAADLISPMLLEYVLGI
IV T +DHK YRSMIGSLLYLTA S + YV+GI
Subjt: ---IVDTTIDHKLYRSMIGSLLYLTAADLISPMLLEYVLGI
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| A0A5D3CS19 Gag-pol polyprotein | 1.7e-218 | 62.83 | Show/hide |
Query: VTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYTIRV
+TD NNQV MSGRR++DNCYHWSS SNICHLTK DQTWLWHRKLG+ISL SLDKVIRNEA+VGIPSLDIN KFFCGDCQVGKQTK+SH LKECYTIRV
Subjt: VTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYTIRV
Query: LELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPITLQ
LELLHLDL+GPMQTESLG KKYVLVVV DY +FTWV FLKGKSDT KLCISLCLNLQ KG+KIIRI SDH EFD+E+LNNF + EGIHHE AAPIT Q
Subjt: LELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPITLQ
Query: QNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFLGYS
QNGVVERKNRTLQEMA+VMIH KNLPLNFW EAVNTACHIHNRVTTRSGTTVTLYELWKGRKPN+
Subjt: QNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFLGYS
Query: QNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEGKRKLITSVEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDG
+R Y+VFNIKSGTVMETIN+VV I Q L+ +P+ TS+E ALKDEY IN MQEELLQFK NNV TLV KP+G
Subjt: QNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEGKRKLITSVEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDG
Query: VNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQ
N VEGVDFDETFA VARLEAIRLLLSISCFRKFKL+QM VKSAFL+GYLN EVYV QPKGFVD +FPQ
Subjt: VNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQ
Query: YVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQT--------------------------------
YVYKLNKALY LKQA + WYERLTMYLGER YSRGET+K LFINRTST+LIVAQIYVDDIIFGGFP+T
Subjt: YVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQT--------------------------------
Query: -------------------------------TTHAKITKDIVDTTIDHKLYRSMIGSLLYLTAADLISPMLLEYVLGI
THAKITKD+V T +DHKLYRSMIGSLLYLT S + YV+GI
Subjt: -------------------------------TTHAKITKDIVDTTIDHKLYRSMIGSLLYLTAADLISPMLLEYVLGI
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| A0A5D3DQT9 Gag/pol polyprotein | 2.1e-200 | 61.57 | Show/hide |
Query: MDGLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDIN
+DGLK NLIS+SQLCDQGYSVNFNNT CV TD NNQVF+SGRR+A+NC HWSS SNICHLTK DQTWLWHRKLG+ISL SLDKVIRN+A+VGIPSLDIN
Subjt: MDGLKANLISISQLCDQGYSVNFNNTGCVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDIN
Query: GKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDH
GKFFCGDC+VGKQTK SHR LKECYTIRVLELLHLDLIGPM+TESLGRKKYVLVVV DY +FT VRFLKGKSDTVKLCISL LNLQR KG+KIIRI SDH
Subjt: GKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDH
Query: GNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIF
G EFD+E+LNNF ++EGIHHEF APIT QQNGVVERKNRT VTTRSGTT+ LYELWKGRKPNVKYFHIF
Subjt: GNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIF
Query: GSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEGKRK----------
GSTCYIL DR YHRKWDVK DQ IFLGYSQNSR Y+VFNIKS TVMETIN+VV + Q L+ +P+G +
Subjt: GSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEGKRK----------
Query: ----------LI------------------TSVEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYA
L+ TSVE ALKDEY INAMQEELLQFK NNV TLV KPD NVI TKWIFKNKTDESGN+
Subjt: ----------LI------------------TSVEKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYA
Query: KVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYS
L+A + ++ CF K+ L +YVYKLNKALYGLKQA WYERLTMYLGERGYS
Subjt: KVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYS
Query: RGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQT
RGET+K +F+NRT+ DLIVAQIYVDDIIFGGFP+T
Subjt: RGETNKRLFINRTSTDLIVAQIYVDDIIFGGFPQT
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| A0A5D3DSN1 Gag-pol polyprotein | 2.7e-208 | 58.13 | Show/hide |
Query: CVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLT-KTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYT
C +T NN V G W K+S C++ T Q + KL +ISL SLDKVIRNEA+VGIPSLDINGKFFCGDCQVGKQTKTSHR LKECY
Subjt: CVVTDNNNQVFMSGRRQADNCYHWSSKSSNICHLT-KTDQTWLWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYT
Query: IRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPI
IRVLELLHLDL+GPMQTESL KKYVLVVV DY+ FTWVRFLK KSDT+KLCISLC+NLQR KG+KII++ SDHG EFD+E+LNNF +++GIHHEF API
Subjt: IRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPI
Query: TLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFL
T QQNGVVERKNRTLQEMA+VMIH NLPLNF EAVNT CHI + H TCYIL DREYHRKWDVK DQGIFL
Subjt: TLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFL
Query: GYSQNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEG-------------------------------KRKLITSV
GYS NSR Y+VFNIKSGTVME IN+VV + Q L+ +P+G K L +S+
Subjt: GYSQNSREYKVFNIKSGTVMETINIVV------IRQ------------------LESLPEG-------------------------------KRKLITSV
Query: --------------EKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEA
+ ALKDEYWIN MQEELLQFK NN+ TLV KPD N+I TKWIFKNKTDES +V +N+ARLVAQGYA+V+GVDF++TFA VARLEA
Subjt: --------------EKALKDEYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEA
Query: IRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIV
IRLLLSISCFRKFKL+QMDVKSAFL+GYLN EVYVAQ K FVDS+FPQYVYK NKALYGLKQA R WYE+LTMYL ERGYSRGE +K LFINRTST LIV
Subjt: IRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIV
Query: AQIYVDDIIFGGFPQT---------------------------------------------------------------TTHAKITKDIVDTTIDHKLYR
AQIYVDDIIFGGFP+T THAKI KD VD +DHKLYR
Subjt: AQIYVDDIIFGGFPQT---------------------------------------------------------------TTHAKITKDIVDTTIDHKLYR
Query: SMIGSLLYLTAADLISPMLLEYVLGI
SMIGSLLYLTA S + YV+GI
Subjt: SMIGSLLYLTAADLISPMLLEYVLGI
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.7e-53 | 24.36 | Show/hide |
Query: NLISISQLCDQGYSVNFNNTGCVVTDNNNQVFM-SGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVG---IPSLDINGK
NL+S+ +L + G S+ F+ +G ++ N V SG ++ + S N H + LWH + G+IS L ++ R + +L+++ +
Subjt: NLISISQLCDQGYSVNFNNTGCVVTDNNNQVFM-SGRRQADNCYHWSSKSSNICHLTKTDQTWLWHRKLGYISLISLDKVIRNEAIVG---IPSLDINGK
Query: FFCGDCQVGKQTKTSHRSLKE-CYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHG
C C GKQ + + LK+ + R L ++H D+ GP+ +L K Y ++ V + + +K KSD + + K++ ++ D+G
Subjt: FFCGDCQVGKQTKTSHRSLKE-CYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHG
Query: NEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRS--GTTVTLYELWKGRKPNVKYFHI
E+ S E+ F +GI + P T Q NGV ER RT+ E A+ M+ L +FW EAV TA ++ NR+ +R+ ++ T YE+W +KP +K+ +
Subjt: NEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACHIHNRVTTRS--GTTVTLYELWKGRKPNVKYFHI
Query: FGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREY-----KVFNIKSGTVMETINIVVIRQL-------------------------------------
FG+T Y+ + K+D K + IF+GY N + + F + V++ N+V R +
Subjt: FGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREY-----KVFNIKSGTVMETINIVVIRQL-------------------------------------
Query: --------------ESLPEGKRKLI----------------------------TSVEKALKDEY------------------------------------
++ P RK+I +K +D++
Subjt: --------------ESLPEGKRKLI----------------------------TSVEKALKDEY------------------------------------
Query: ------------------------------------------------------WINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNV
W A+ EL K NN T+ +P+ N++ ++W+F K +E GN
Subjt: ------------------------------------------------------WINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNV
Query: TKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWY
+ KARLVA+G+ + +D++ETFA VAR+ + R +LS+ K++QMDVK+AFL+G L E+Y+ P+G S V KLNKA+YGLKQA R W+
Subjt: TKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWY
Query: ERLTMYLGERGYSRGETNKRLFI--NRTSTDLIVAQIYVDDII
E L E + ++ ++I + I +YVDD++
Subjt: ERLTMYLGERGYSRGETNKRLFI--NRTSTDLIVAQIYVDDII
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| P0C2J7 Transposon Ty4-H Gag-Pol polyprotein | 1.2e-14 | 23.97 | Show/hide |
Query: HRKLGYISLISLDKVIR-NEAIVGIPSLDINGKFFCGDCQVGKQTKTSH--RSLKECYTIRVL-ELLHLDLIGPMQTESLGRKKYVLVVVGD--YYKFTW
H+++G+ + ++ I+ N + + +F+C C++ K TK +H S+ T +D+ GP+ + + K+Y+L++V + Y T
Subjt: HRKLGYISLISLDKVIR-NEAIVGIPSLDINGKFFCGDCQVGKQTKTSH--RSLKECYTIRVL-ELLHLDLIGPMQTESLGRKKYVLVVVGD--YYKFTW
Query: VRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVN
F K + ++ +K+ I+SD G EF ++++ ++ S+GIHH + NG ER RT+ A ++ NL + FW AV
Subjt: VRFLKGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVN
Query: TACHIHNRVTTRSGTTVTLYELWKGRKP---NVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV
+A +I N + +S + L + R+P + F FG I + H+K I L NS YK F ++ + N +
Subjt: TACHIHNRVTTRSGTTVTLYELWKGRKP---NVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFNIKSGTVMETINIVV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-64 | 28.48 | Show/hide |
Query: LWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFL
LWH+++G++S L + + I + C C GKQ + S ++ E + +L+L++ D+ GPM+ ES+G KY + + D + WV L
Subjt: LWHRKLGYISLISLDKVIRNEAIVGIPSLDINGKFFCGDCQVGKQTKTSHRSLKECYTIRVLELLHLDLIGPMQTESLGRKKYVLVVVGDYYKFTWVRFL
Query: KGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACH
K K ++ ++R G+K+ R+ SD+G E+ S E + S GI HE P T Q NGV ER NRT+ E + M+ + LP +FW EAV TAC+
Subjt: KGKSDTVKLCISLCLNLQRLKGKKIIRIHSDHGNEFDSEELNNFYKSEGIHHEFAAPITLQQNGVVERKNRTLQEMAQVMIHVKNLPLNFWPEAVNTACH
Query: IHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFN----------------------------I
+ NR + +W ++ + + +FG + +E K D K IF+GY Y++++ +
Subjt: IHNRVTTRSGTTVTLYELWKGRKPNVKYFHIFGSTCYILDDREYHRKWDVKYDQGIFLGYSQNSREYKVFN----------------------------I
Query: KSGTVMETINI-------------------------VVIRQLESLPEG-----------------KRKLITSVE------------------KALKD---
K+G + + I VI Q E L EG +R VE ++LK+
Subjt: KSGTVMETINI-------------------------VVIRQLESLPEG-----------------KRKLITSVE------------------KALKD---
Query: ----EYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLY
+ AMQEE+ + N LV P G + KW+FK K D + + KARLV +G+ + +G+DFDE F+ V ++ +IR +LS++ ++
Subjt: ----EYWINAMQEELLQFKCNNVLTLVHKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFKLY
Query: QMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTS-TDLIVAQIYVDDIIFGG
Q+DVK+AFL G L E+Y+ QP+GF + V KLNK+LYGLKQA R WY + ++ + Y + ++ ++ R S + I+ +YVDD++ G
Subjt: QMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTS-TDLIVAQIYVDDIIFGG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.3e-37 | 40.98 | Show/hide |
Query: KALKDEYWINAMQEELLQFKCNNVLTLVHKPDG-VNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFK
+ALKDE W NAM E+ N+ LV P V ++ +WIF K + G++ + KARLVA+GY + G+D+ ETF+ V + +IR++L ++ R +
Subjt: KALKDEYWINAMQEELLQFKCNNVLTLVHKPDG-VNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFK
Query: LYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFP
+ Q+DV +AFL G L +VY++QP GF+D P YV KL KALYGLKQA R WY L YL G+ ++ LF+ + ++ +YVDDI+ G
Subjt: LYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGGFP
Query: QTTTH
T H
Subjt: QTTTH
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.7e-35 | 40.4 | Show/hide |
Query: KALKDEYWINAMQEELLQFKCNNVLTLV-HKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFK
+A+KD+ W AM E+ N+ LV P V ++ +WIF K + G++ + KARLVA+GY + G+D+ ETF+ V + +IR++L ++ R +
Subjt: KALKDEYWINAMQEELLQFKCNNVLTLV-HKPDGVNVIVTKWIFKNKTDESGNVTKNKARLVAQGYAKVEGVDFDETFALVARLEAIRLLLSISCFRKFK
Query: LYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGG
+ Q+DV +AFL G L EVY++QP GFVD P YV +L KA+YGLKQA R WY L YL G+ ++ LF+ + +I +YVDDI+ G
Subjt: LYQMDVKSAFLDGYLNVEVYVAQPKGFVDSKFPQYVYKLNKALYGLKQALRVWYERLTMYLGERGYSRGETNKRLFINRTSTDLIVAQIYVDDIIFGG
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