; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc01g0011681 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0011681
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty1-H Gag-Pol polyprotein
Genome locationCMiso1.1chr01:7236712..7237466
RNA-Seq ExpressionCmc01g0011681
SyntenyCmc01g0011681
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025871.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.3e-9677.11Show/hide
Query:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL
        F  K  PDGTI RHKARLV KGYHQ               KPTI IILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQ+KTCP HVCLLHKSL
Subjt:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL

Query:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA
        Y                          ADPSLFIRSVGSSLTYLLLYVDDIIVT PDYLYIS LKNQLALEFKISDL PLKYFLGLEIQSSIDGI VNQA
Subjt:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA

Query:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ
        KYLNDLLHTSGMTS KSCITP+STS DLYTIAPPFNDPSLYRRLVGSLQ
Subjt:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ

KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.7e-9784.68Show/hide
Query:  DGTIARHKARLVAKGYHQKPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLG
        DGTIARHKARLVAKGYH                                 QETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLG
Subjt:  DGTIARHKARLVAKGYHQKPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLG

Query:  FVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTSGMTSAKSCITPI
        FVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA+YLNDLLHTSGMTSAKSCITPI
Subjt:  FVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTSGMTSAKSCITPI

Query:  STSLDLYTIAPPFNDPSLYRRL
        STSLDLYTIAPPFNDPSLYRRL
Subjt:  STSLDLYTIAPPFNDPSLYRRL

TYJ96936.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-9677.91Show/hide
Query:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL
        F  K  PDGTIARHKARLVAKGYHQ               KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQP  FQ+KTCPNHVCLLHKSL
Subjt:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL

Query:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA
        Y                          ADPSLFIRSVGS L+YLLLYVDDIIVTG DYLYIS LKNQLALEFKIS+LGPLKYFLGLEIQSSIDGI VNQA
Subjt:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA

Query:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ
        KYLNDLLHTSGMTSAKSCITP+STSLDLYTIAPPFNDPSLYRRLVGSLQ
Subjt:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ

TYK00083.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.5e-10180.33Show/hide
Query:  IARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAW
        +ARHKARLVAKGYHQ               KPTI+IILALAAQY+WSLTQLDVKN FLHGILQETVYM+QPT FQ+KTCPNHVCLLHKSLYGLKQAPRAW
Subjt:  IARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAW

Query:  FERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTS
        FE FTSYLFTLGFV S ADPSLFIRSVGSSLTYLLLYVDDIIVTGPD  YIS LK QLALEF+ISDLGPLKYFLGL+I S  +G+ VNQ KYLNDLLHTS
Subjt:  FERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTS

Query:  GMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ
         M SAKSC  P+S SLDLYT APPFND SLYR+LVGSLQ
Subjt:  GMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ

XP_016902519.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]3.5e-10280.72Show/hide
Query:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL
        F  K  PDGTIARHKARLVAKGY Q               K TIRIILAL AQYNWSLT LDVKNAFLHGILQETVYM QPTGFQ+K     +C+    +
Subjt:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL

Query:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA
        YG+KQAPRAWFE FTSYLFTLGFVAST DPSLFIRSVGSSLTYLLLYVDDII+T PDYLYIS LKNQLALEFKI DLG LKYFLGLEIQSSIDGI VNQA
Subjt:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA

Query:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ
        KYLNDLLHTSGMT AKSCITP+STSLDLYTIAPPFNDPSLYRRLVGSLQ
Subjt:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ

TrEMBL top hitse value%identityAlignment
A0A1S4E2Q9 uncharacterized mitochondrial protein AtMg00810-like1.7e-10280.72Show/hide
Query:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL
        F  K  PDGTIARHKARLVAKGY Q               K TIRIILAL AQYNWSLT LDVKNAFLHGILQETVYM QPTGFQ+K     +C+    +
Subjt:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL

Query:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA
        YG+KQAPRAWFE FTSYLFTLGFVAST DPSLFIRSVGSSLTYLLLYVDDII+T PDYLYIS LKNQLALEFKI DLG LKYFLGLEIQSSIDGI VNQA
Subjt:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA

Query:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ
        KYLNDLLHTSGMT AKSCITP+STSLDLYTIAPPFNDPSLYRRLVGSLQ
Subjt:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ

A0A5A7UZE5 Putative mitochondrial protein2.8e-9784.68Show/hide
Query:  DGTIARHKARLVAKGYHQKPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLG
        DGTIARHKARLVAKGYH                                 QETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLG
Subjt:  DGTIARHKARLVAKGYHQKPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLG

Query:  FVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTSGMTSAKSCITPI
        FVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA+YLNDLLHTSGMTSAKSCITPI
Subjt:  FVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTSGMTSAKSCITPI

Query:  STSLDLYTIAPPFNDPSLYRRL
        STSLDLYTIAPPFNDPSLYRRL
Subjt:  STSLDLYTIAPPFNDPSLYRRL

A0A5D3BD76 Putative mitochondrial protein6.2e-9777.91Show/hide
Query:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL
        F  K  PDGTIARHKARLVAKGYHQ               KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQP  FQ+KTCPNHVCLLHKSL
Subjt:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL

Query:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA
        Y                          ADPSLFIRSVGS L+YLLLYVDDIIVTG DYLYIS LKNQLALEFKIS+LGPLKYFLGLEIQSSIDGI VNQA
Subjt:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA

Query:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ
        KYLNDLLHTSGMTSAKSCITP+STSLDLYTIAPPFNDPSLYRRLVGSLQ
Subjt:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ

A0A5D3BJZ6 Putative mitochondrial protein3.2e-10180.33Show/hide
Query:  IARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAW
        +ARHKARLVAKGYHQ               KPTI+IILALAAQY+WSLTQLDVKN FLHGILQETVYM+QPT FQ+KTCPNHVCLLHKSLYGLKQAPRAW
Subjt:  IARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAW

Query:  FERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTS
        FE FTSYLFTLGFV S ADPSLFIRSVGSSLTYLLLYVDDIIVTGPD  YIS LK QLALEF+ISDLGPLKYFLGL+I S  +G+ VNQ KYLNDLLHTS
Subjt:  FERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTS

Query:  GMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ
         M SAKSC  P+S SLDLYT APPFND SLYR+LVGSLQ
Subjt:  GMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ

A0A5D3DQS0 Putative mitochondrial protein1.7e-10280.72Show/hide
Query:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL
        F  K  PDGTIARHKARLVAKGY Q               K TIRIILAL AQYNWSLT LDVKNAFLHGILQETVYM QPTGFQ+K     +C+    +
Subjt:  FLNKIYPDGTIARHKARLVAKGYHQ---------------KPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL

Query:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA
        YG+KQAPRAWFE FTSYLFTLGFVAST DPSLFIRSVGSSLTYLLLYVDDII+T PDYLYIS LKNQLALEFKI DLG LKYFLGLEIQSSIDGI VNQA
Subjt:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA

Query:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ
        KYLNDLLHTSGMT AKSCITP+STSLDLYTIAPPFNDPSLYRRLVGSLQ
Subjt:  KYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSLQ

SwissProt top hitse value%identityAlignment
P04146 Copia protein6.1e-3334.3Show/hide
Query:  GTIARHKARLVAKGYHQK---------------PTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPR
        G   R+KARLVA+G+ QK                + R IL+L  QYN  + Q+DVK AFL+G L+E +YM  P G    +  ++VC L+K++YGLKQA R
Subjt:  GTIARHKARLVAKGYHQK---------------PTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPR

Query:  AWFERFTSYLFTLGFVASTADPSLFIRSVG--SSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDL
         WFE F   L    FV S+ D  ++I   G  +   Y+LLYVDD+++   D   ++  K  L  +F+++DL  +K+F+G+ I+   D I ++Q+ Y+  +
Subjt:  AWFERFTSYLFTLGFVASTADPSLFIRSVG--SSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDL

Query:  LHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSL
        L    M +  +  TP+ + ++   +    +  +  R L+G L
Subjt:  LHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYRRLVGSL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.9e-3638.84Show/hide
Query:  DGTIARHKARLVAKGYHQK---------------PTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAP
        D  + R+KARLV KG+ QK                +IR IL+LAA  +  + QLDVK AFLHG L+E +YM QP GF+     + VC L+KSLYGLKQAP
Subjt:  DGTIARHKARLVAKGYHQK---------------PTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAP

Query:  RAWFERFTSYLFTLGFVASTADPSLFIRSVG-SSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEI--QSSIDGIVVNQAKYLN
        R W+ +F S++ +  ++ + +DP ++ +    ++   LLLYVDD+++ G D   I+ LK  L+  F + DLGP +  LG++I  + +   + ++Q KY+ 
Subjt:  RAWFERFTSYLFTLGFVASTADPSLFIRSVG-SSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEI--QSSIDGIVVNQAKYLN

Query:  DLLHTSGMTSAKSCITPISTSLDL
         +L    M +AK   TP++  L L
Subjt:  DLLHTSGMTSAKSCITPISTSLDL

P25600 Putative transposon Ty5-1 protein YCL074W2.3e-2433.68Show/hide
Query:  LDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLY
        +DV  AFL+  + E +Y+ QP GF N+  P++V  L+  +YGLKQAP  W E   + L  +GF     +  L+ RS      Y+ +YVDD++V  P    
Subjt:  LDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLY

Query:  ISALKNQLALEFKISDLGPLKYFLGLEIQSSIDG-IVVNQAKYLNDLLHTSGMTSAKSCITPISTSLDLY-TIAPPFNDPSLYRRLVGSL
           +K +L   + + DLG +  FLGL I  S +G I ++   Y+      S + + K   TP+  S  L+ T +P   D + Y+ +VG L
Subjt:  ISALKNQLALEFKISDLGPLKYFLGLEIQSSIDG-IVVNQAKYLNDLLHTSGMTSAKSCITPISTSLDLY-TIAPPFNDPSLYRRLVGSL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE18.1e-5445.02Show/hide
Query:  FLNKIYPDGTIARHKARLVAKGYHQKP---------------TIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL
        F  K   DG++ R+KARLVAKGY+Q+P               +IRI+L +A   +W + QLDV NAFL G L + VYM+QP GF +K  PN+VC L K+L
Subjt:  FLNKIYPDGTIARHKARLVAKGYHQKP---------------TIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL

Query:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA
        YGLKQAPRAW+    +YL T+GFV S +D SLF+   G S+ Y+L+YVDDI++TG D   +    + L+  F + D   L YFLG+E +    G+ ++Q 
Subjt:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA

Query:  KYLNDLLHTSGMTSAKSCITPISTS--LDLYTIAPPFNDPSLYRRLVGSLQ
        +Y+ DLL  + M +AK   TP++ S  L LY+      DP+ YR +VGSLQ
Subjt:  KYLNDLLHTSGMTSAKSCITPISTS--LDLYTIAPPFNDPSLYRRLVGSLQ

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.4e-5243.82Show/hide
Query:  FLNKIYPDGTIARHKARLVAKGYHQKP---------------TIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL
        F  K   DG++ R+KARLVAKGY+Q+P               +IRI+L +A   +W + QLDV NAFL G L + VYM+QP GF +K  P++VC L K++
Subjt:  FLNKIYPDGTIARHKARLVAKGYHQKP---------------TIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSL

Query:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA
        YGLKQAPRAW+    +YL T+GFV S +D SLF+   G S+ Y+L+YVDDI++TG D + +    + L+  F + +   L YFLG+E +    G+ ++Q 
Subjt:  YGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQA

Query:  KYLNDLLHTSGMTSAKSCITPISTS--LDLYTIAPPFNDPSLYRRLVGSLQ
        +Y  DLL  + M +AK   TP++TS  L L++      DP+ YR +VGSLQ
Subjt:  KYLNDLLHTSGMTSAKSCITPISTS--LDLYTIAPPFNDPSLYRRLVGSLQ

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 87.6e-4743.2Show/hide
Query:  KIYPDGTIARHKARLVAKGYHQK---------------PTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQ----NKTCPNHVCLLHKS
        K   DGTI R+KARLVAKGY Q+                ++++ILA++A YN++L QLD+ NAFL+G L E +YM  P G+     +   PN VC L KS
Subjt:  KIYPDGTIARHKARLVAKGYHQK---------------PTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQ----NKTCPNHVCLLHKS

Query:  LYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQ
        +YGLKQA R WF +F+  L   GFV S +D + F++   +    +L+YVDDII+   +   +  LK+QL   FK+ DLGPLKYFLGLEI  S  GI + Q
Subjt:  LYGLKQAPRAWFERFTSYLFTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQ

Query:  AKYLNDLLHTSGMTSAKSCITPISTSLDLYT-IAPPFNDPSLYRRLVGSL
         KY  DLL  +G+   K    P+  S+         F D   YRRL+G L
Subjt:  AKYLNDLLHTSGMTSAKSCITPISTSLDLYT-IAPPFNDPSLYRRLVGSL

ATMG00810.1 DNA/RNA polymerases superfamily protein9.6e-1840.19Show/hide
Query:  YLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYR
        YLLLYVDDI++TG     ++ L  QL+  F + DLGP+ YFLG++I++   G+ ++Q KY   +L+ +GM   K   TP+   L+       + DPS +R
Subjt:  YLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTSGMTSAKSCITPISTSLDLYTIAPPFNDPSLYR

Query:  RLVGSLQ
         +VG+LQ
Subjt:  RLVGSLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTTTGAATAAAATATATCCCGATGGCACTATTGCTCGTCACAAGGCGCGACTGGTTGCTAAAGGTTATCATCAGAAACCTACTATACGTATCATTCTT
GCTCTTGCTGCTCAATACAATTGGTCCTTAACCCAGTTAGATGTCAAAAATGCCTTTCTTCATGGTATTCTTCAGGAAACAGTGTACATGACTCAACCTACTGGC
TTCCAAAACAAAACATGTCCCAATCATGTGTGTCTCCTCCACAAGAGTCTTTATGGTCTCAAACAGGCTCCTCGCGCTTGGTTTGAACGCTTTACATCTTATTTA
TTCACTTTGGGTTTTGTTGCGTCTACAGCTGATCCCTCATTATTCATTCGATCAGTGGGATCCTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTC
ACTGGACCTGACTATTTATACATTTCTGCTCTTAAAAACCAATTGGCCCTGGAATTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATC
CAATCCTCCATTGATGGCATAGTTGTTAACCAAGCTAAATATCTCAATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATATCT
ACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTTTGAATAAAATATATCCCGATGGCACTATTGCTCGTCACAAGGCGCGACTGGTTGCTAAAGGTTATCATCAGAAACCTACTATACGTATCATTCTT
GCTCTTGCTGCTCAATACAATTGGTCCTTAACCCAGTTAGATGTCAAAAATGCCTTTCTTCATGGTATTCTTCAGGAAACAGTGTACATGACTCAACCTACTGGC
TTCCAAAACAAAACATGTCCCAATCATGTGTGTCTCCTCCACAAGAGTCTTTATGGTCTCAAACAGGCTCCTCGCGCTTGGTTTGAACGCTTTACATCTTATTTA
TTCACTTTGGGTTTTGTTGCGTCTACAGCTGATCCCTCATTATTCATTCGATCAGTGGGATCCTCTCTCACTTACTTACTTTTGTATGTAGATGACATCATTGTC
ACTGGACCTGACTATTTATACATTTCTGCTCTTAAAAACCAATTGGCCCTGGAATTCAAAATATCCGACCTTGGTCCTTTAAAGTACTTTCTTGGTCTCGAAATC
CAATCCTCCATTGATGGCATAGTTGTTAACCAAGCTAAATATCTCAATGATCTCCTCCACACATCGGGAATGACCTCTGCCAAATCTTGTATCACACCAATATCT
ACTTCTCTTGATCTTTATACAATTGCACCACCATTTAATGATCCATCACTTTATCGCAGACTAGTTGGTTCCTTGCAATAA
Protein sequenceShow/hide protein sequence
MGFLNKIYPDGTIARHKARLVAKGYHQKPTIRIILALAAQYNWSLTQLDVKNAFLHGILQETVYMTQPTGFQNKTCPNHVCLLHKSLYGLKQAPRAWFERFTSYL
FTLGFVASTADPSLFIRSVGSSLTYLLLYVDDIIVTGPDYLYISALKNQLALEFKISDLGPLKYFLGLEIQSSIDGIVVNQAKYLNDLLHTSGMTSAKSCITPIS
TSLDLYTIAPPFNDPSLYRRLVGSLQ