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Cmc01g0012251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc01g0012251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionS-protein homolog
Genome locationCMiso1.1chr01:8220209..8220631
RNA-Seq ExpressionCmc01g0012251
SyntenyCmc01g0012251
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059530.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.8e-5392.31Show/hide
Query:  SLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGE
        +LFT EGKPFQNPLVTVNITNALTHKDQLTVHCKS DDDLG+HQLQPLGGYAFTFRPNFIGTTLFYCTFQW GWS++FDIYKDSRDRDRCN LCLWIVGE
Subjt:  SLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGE

Query:  QGVC
        QGVC
Subjt:  QGVC

KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]9.1e-5069.06Show/hide
Query:  MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTH-KDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIY
        M SFSTF L L IS+ F+++FTIEGKPFQ+P VTVNITNAL    +QLT+HCKSGDDDLG+HQL  L  YAF FRPNF G+TLFYC F W G SH F+IY
Subjt:  MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTH-KDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIY

Query:  KDSRDRDRCNG-LCLWIVGEQGVCMFHYVTKKYDFCYTW
        +D RDR +CN  LCLWIVGEQG+CMF Y T  YD CYTW
Subjt:  KDSRDRDRCNG-LCLWIVGEQGVCMFHYVTKKYDFCYTW

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]9.3e-71100Show/hide
Query:  LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQ
        LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQ
Subjt:  LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQ

Query:  GVCMFHYVTKKYDFCYTWVDK
        GVCMFHYVTKKYDFCYTWVDK
Subjt:  GVCMFHYVTKKYDFCYTWVDK

XP_022975116.1 S-protein homolog 3-like, partial [Cucurbita maxima]6.1e-3871.17Show/hide
Query:  ISMFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-G
        +S+ F++LF TI+G  F++P +TVNITN L   +QLTVHCKSGDDDLGIHQL  LGGYAFTFRPNF GTT FYCTFQWPG+S  FDIYKD RDR +CN  
Subjt:  ISMFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-G

Query:  LCLWIVGEQGV
        LCLWIVG+QG+
Subjt:  LCLWIVGEQGV

XP_023522352.1 S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo]3.2e-3967.77Show/hide
Query:  MGSFSTFALCLLISMFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIY
        M SFST A  LL+S+FF++LF TI+G  F++P +TVNITN L   +QL V CKS DDDL IHQL PLGGYAFTF+PNF G+T FYCTF+W G+SH FDIY
Subjt:  MGSFSTFALCLLISMFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIY

Query:  KDSRDRDRCNG-LCLWIVGEQ
        KD+RDR +CN  LCLWIVGEQ
Subjt:  KDSRDRDRCNG-LCLWIVGEQ

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog4.4e-5069.06Show/hide
Query:  MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTH-KDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIY
        M SFSTF L L IS+ F+++FTIEGKPFQ+P VTVNITNAL    +QLT+HCKSGDDDLG+HQL  L  YAF FRPNF G+TLFYC F W G SH F+IY
Subjt:  MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTH-KDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIY

Query:  KDSRDRDRCNG-LCLWIVGEQGVCMFHYVTKKYDFCYTW
        +D RDR +CN  LCLWIVGEQG+CMF Y T  YD CYTW
Subjt:  KDSRDRDRCNG-LCLWIVGEQGVCMFHYVTKKYDFCYTW

A0A1S3CP53 S-protein homolog4.5e-71100Show/hide
Query:  LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQ
        LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQ
Subjt:  LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQ

Query:  GVCMFHYVTKKYDFCYTWVDK
        GVCMFHYVTKKYDFCYTWVDK
Subjt:  GVCMFHYVTKKYDFCYTWVDK

A0A5A7UWN1 S-protein homolog8.5e-5492.31Show/hide
Query:  SLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGE
        +LFT EGKPFQNPLVTVNITNALTHKDQLTVHCKS DDDLG+HQLQPLGGYAFTFRPNFIGTTLFYCTFQW GWS++FDIYKDSRDRDRCN LCLWIVGE
Subjt:  SLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGE

Query:  QGVC
        QGVC
Subjt:  QGVC

A0A6J1IDA7 S-protein homolog3.0e-3871.17Show/hide
Query:  ISMFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-G
        +S+ F++LF TI+G  F++P +TVNITN L   +QLTVHCKSGDDDLGIHQL  LGGYAFTFRPNF GTT FYCTFQWPG+S  FDIYKD RDR +CN  
Subjt:  ISMFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-G

Query:  LCLWIVGEQGV
        LCLWIVG+QG+
Subjt:  LCLWIVGEQGV

A0A6J1IDI1 S-protein homolog8.6e-3870.27Show/hide
Query:  ISMFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-G
        +S+FF++LF TI+   F++P +TVNITN L   +QLTVHCKSGDDDLGIHQL  LGGYAFTFRPNF G+T FYCTFQWPG+S  FDIYKD RDR +CN  
Subjt:  ISMFFSSLF-TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN-G

Query:  LCLWIVGEQGV
        LCLWIVG+QG+
Subjt:  LCLWIVGEQGV

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.2e-2347.22Show/hide
Query:  TVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDR---DRC-NGLCLWIVGEQGVCMFHYVTK
        TV I N L ++  L  HCKS DDDLG   LQP   ++F+F   F G TL++C+F WP  SHSFDIYKD RD    ++C +  C+W +   G C F+  TK
Subjt:  TVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDR---DRC-NGLCLWIVGEQGVCMFHYVTK

Query:  KYDFCYTW
        ++D CY W
Subjt:  KYDFCYTW

F4JZG1 S-protein homolog 41.4e-2140.46Show/hide
Query:  LLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFI-GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN
        LLI + FS +       +      V ITN L     L +HCKS DDDLG+  L P G ++F FRP+ + G TLF+C F WPG S  F+IY D RD  R  
Subjt:  LLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFI-GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN

Query:  ---GLCLWIVGEQGVCMFHYVTKKYDFCYTW
             C+W +G+ G C F  +   ++ CY W
Subjt:  ---GLCLWIVGEQGVCMFHYVTKKYDFCYTW

O23020 S-protein homolog 51.7e-1438.28Show/hide
Query:  LISMFFSSLF--TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN
        ++  FF  LF     G P       V +TN L     LT+HCKS  DDLGIH +     Y F F+PN   +TLF+C+FQW     SFDIY   RD+  C+
Subjt:  LISMFFSSLF--TIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN

Query:  GLCLWIVGEQGVCMFHYVTKKYDFCYTW
          C W +   G C      K    C+ W
Subjt:  GLCLWIVGEQGVCMFHYVTKKYDFCYTW

P0DN93 S-protein homolog 295.2e-1635.04Show/hide
Query:  MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYK
        M + S   + L I +F+         PF   +VTV  TN ++ +  LT+ C+S DDDLG H L     + + FRP++  TTLF C F W      FD Y+
Subjt:  MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYK

Query:  DSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTW
          RD+  C   C W +     C+     KK+D CY W
Subjt:  DSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTW

Q9FMQ4 S-protein homolog 34.4e-2348.11Show/hide
Query:  VNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGL---CLWIVGEQGVCMFHYVTKKY
        V ITN L     L +HCKS DDDLG+  L P G ++F FR + +GTTLFYC F WPG S  FDIY D RD  R +     C+W +  QG CMF      +
Subjt:  VNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGL---CLWIVGEQGVCMFHYVTKKY

Query:  DFCYTW
        + CY W
Subjt:  DFCYTW

Arabidopsis top hitse value%identityAlignment
AT3G16970.1 Plant self-incompatibility protein S1 family1.2e-1840.71Show/hide
Query:  FQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN---GLCLWIVGEQGVCMF
        F NP  TV I N L     L  HCKS +DDLG   +   G ++F FRP+  G TLF+C F W    H FDIYK SRDR+        C W + + G C  
Subjt:  FQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN---GLCLWIVGEQGVCMF

Query:  HYVTKKYDFCYTW
        +  +  +D C  W
Subjt:  HYVTKKYDFCYTW

AT3G17080.1 Plant self-incompatibility protein S1 family9.4e-2139.01Show/hide
Query:  MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYK
        MGS  T  L  ++ MF S++ +           +V I N L     L  HCKS +DDLG   L P   ++F F P+  G TLFYC F W   SH FDIYK
Subjt:  MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYK

Query:  DSRDRD----RCNGLCLWIVGEQGVCMFHYVTKKYDFCYTW
         SRD++     C   C W + + G C F+  T  +D CY+W
Subjt:  DSRDRD----RCNGLCLWIVGEQGVCMFHYVTKKYDFCYTW

AT4G16195.1 Plant self-incompatibility protein S1 family8.2e-2547.22Show/hide
Query:  TVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDR---DRC-NGLCLWIVGEQGVCMFHYVTK
        TV I N L ++  L  HCKS DDDLG   LQP   ++F+F   F G TL++C+F WP  SHSFDIYKD RD    ++C +  C+W +   G C F+  TK
Subjt:  TVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDR---DRC-NGLCLWIVGEQGVCMFHYVTK

Query:  KYDFCYTW
        ++D CY W
Subjt:  KYDFCYTW

AT5G12060.1 Plant self-incompatibility protein S1 family3.1e-2448.11Show/hide
Query:  VNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGL---CLWIVGEQGVCMFHYVTKKY
        V ITN L     L +HCKS DDDLG+  L P G ++F FR + +GTTLFYC F WPG S  FDIY D RD  R +     C+W +  QG CMF      +
Subjt:  VNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGL---CLWIVGEQGVCMFHYVTKKY

Query:  DFCYTW
        + CY W
Subjt:  DFCYTW

AT5G12070.1 Plant self-incompatibility protein S1 family1.0e-2240.46Show/hide
Query:  LLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFI-GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN
        LLI + FS +       +      V ITN L     L +HCKS DDDLG+  L P G ++F FRP+ + G TLF+C F WPG S  F+IY D RD  R  
Subjt:  LLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFI-GTTLFYCTFQWPGWSHSFDIYKDSRDRDRCN

Query:  ---GLCLWIVGEQGVCMFHYVTKKYDFCYTW
             C+W +G+ G C F  +   ++ CY W
Subjt:  ---GLCLWIVGEQGVCMFHYVTKKYDFCYTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCTTTTCAACATTTGCACTATGTCTTTTGATATCTATGTTTTTTTCTAGCTTATTCACTATCGAAGGAAAACCATTCCAAAATCCACTCGTTACAGTC
AACATAACAAATGCTCTTACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAATCCACCAGCTGCAGCCTTTGGGTGGCTACGCC
TTCACTTTTCGACCAAACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCTGGTTGGTCACATAGCTTCGATATTTACAAGGATTCAAGAGATAGA
GATCGTTGCAACGGTCTTTGTTTGTGGATTGTGGGTGAACAAGGTGTTTGTATGTTCCACTATGTTACCAAAAAGTATGATTTTTGCTATACGTGGGTGGATAAA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCTTTTCAACATTTGCACTATGTCTTTTGATATCTATGTTTTTTTCTAGCTTATTCACTATCGAAGGAAAACCATTCCAAAATCCACTCGTTACAGTC
AACATAACAAATGCTCTTACACATAAGGATCAACTCACCGTTCATTGCAAATCTGGCGATGACGACTTGGGAATCCACCAGCTGCAGCCTTTGGGTGGCTACGCC
TTCACTTTTCGACCAAACTTCATTGGTACAACATTGTTTTACTGTACCTTCCAGTGGCCTGGTTGGTCACATAGCTTCGATATTTACAAGGATTCAAGAGATAGA
GATCGTTGCAACGGTCTTTGTTTGTGGATTGTGGGTGAACAAGGTGTTTGTATGTTCCACTATGTTACCAAAAAGTATGATTTTTGCTATACGTGGGTGGATAAA
TGA
Protein sequenceShow/hide protein sequence
MGSFSTFALCLLISMFFSSLFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIGTTLFYCTFQWPGWSHSFDIYKDSRDR
DRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVDK